RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 KLHDC4Q8TBB5 520 aa14.08□□□□□ -0.16
SNX21-205ENST00000372547 C3P01024 1663 aa14.08□□□□□ -0.16
SNX21-205ENST00000372547 FLT4P35916 1363 aa14.08□□□□□ -0.16
SNX21-205ENST00000372547 XRN1Q8IZH2 1706 aaKnown RBP14.08□□□□□ -0.16
SNX21-205ENST00000372547 OVOS2A0A0J9YW53 1432 aa14.08□□□□□ -0.16
SNX21-205ENST00000372547 OVOS2Q6IE36 1432 aa14.08□□□□□ -0.16
SNX21-205ENST00000372547 ANKRD1Q15327 319 aa14.07□□□□□ -0.16
SNX21-205ENST00000372547 ERCC6LQ2NKX8 1250 aa14.07□□□□□ -0.16
SNX21-205ENST00000372547 AOPEPQ8N6M6 819 aa14.07□□□□□ -0.16
SNX21-205ENST00000372547 MON2Q7Z3U7 1717 aa14.07□□□□□ -0.16
SNX21-205ENST00000372547 ITSN1Q15811 1721 aa14.07□□□□□ -0.16
SNX21-205ENST00000372547 IQCB1Q15051 598 aa14.07□□□□□ -0.16
SNX21-205ENST00000372547 RBM6P78332 1123 aaKnown RBP14.06□□□□□ -0.16
SNX21-205ENST00000372547 EAF2Q96CJ1 260 aaPredicted RBP14.06□□□□□ -0.16
SNX21-205ENST00000372547 LGR6Q9HBX8 967 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 TMEM51Q9NW97 253 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 MAP3K2Q9Y2U5 619 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 IGSF1Q8N6C5 1336 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 ROBO2Q9HCK4 1378 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 HTATSF1O43719 755 aaKnown RBP14.06□□□□□ -0.16
SNX21-205ENST00000372547 SLU7O95391 586 aaKnown RBP14.06□□□□□ -0.16
SNX21-205ENST00000372547 CHGBP05060 677 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 AIMP1Q12904 312 aaKnown RBP14.06□□□□□ -0.16
SNX21-205ENST00000372547 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNX21-205ENST00000372547 STX1AQ16623 288 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 CCDC73Q6ZRK6 1079 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 LRRN4CLQ8ND94 238 aa14.06□□□□□ -0.16
SNX21-205ENST00000372547 CCDC66A2RUB6 948 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 KINO60870 393 aaKnown RBP14.05□□□□□ -0.16
SNX21-205ENST00000372547 SMC2O95347 1197 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 SYT10Q6XYQ8 523 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 RBM43Q6ZSC3 357 aaKnown RBP14.05□□□□□ -0.16
SNX21-205ENST00000372547 Q6ZUG5 572 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 CCAR2Q8N163 923 aaKnown RBP14.05□□□□□ -0.16
SNX21-205ENST00000372547 ERO1AQ96HE7 468 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 USP6P35125 1406 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 ME1P48163 572 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 CCZ1BP86790 482 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 CCZ1P86791 482 aaPredicted RBP14.05□□□□□ -0.16
SNX21-205ENST00000372547 CCDC129Q6ZRS4 1044 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 GOLPH3LQ9H4A5 285 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 CFAP45Q9UL16 551 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 TNRQ92752 1358 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 RESTQ13127 1097 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 SNW1Q13573 536 aaKnown RBP14.05□□□□□ -0.16
SNX21-205ENST00000372547 NYAP1Q6ZVC0 841 aa14.05□□□□□ -0.16
SNX21-205ENST00000372547 SPATA31D1Q6ZQQ2 1576 aa14.04□□□□□ -0.16
SNX21-205ENST00000372547 SBNO1A3KN83 1393 aa14.04□□□□□ -0.16
SNX21-205ENST00000372547 CCT2P78371 535 aaKnown RBP14.04□□□□□ -0.16
SNX21-205ENST00000372547 ZRSR1Q15695 479 aaKnown RBP14.04□□□□□ -0.16
SNX21-205ENST00000372547 HOMER1Q86YM7 354 aa14.04□□□□□ -0.16
SNX21-205ENST00000372547 MRFAP1L1Q96HT8 127 aa14.04□□□□□ -0.16
SNX21-205ENST00000372547 FAM208AQ9UK61 1670 aaKnown RBP14.04□□□□□ -0.16
SNX21-205ENST00000372547 CDC25BP30305 580 aa14.04□□□□□ -0.16
SNX21-205ENST00000372547 KCNB2Q92953 911 aa14.04□□□□□ -0.16
SNX21-205ENST00000372547 SDF4Q9BRK5 362 aa14.04□□□□□ -0.16
SNX21-205ENST00000372547 ZNF446Q9NWS9 450 aa14.04□□□□□ -0.16
SNX21-205ENST00000372547 BIN1O00499 593 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 POLR3GO15318 223 aaPredicted RBP14.03□□□□□ -0.16
SNX21-205ENST00000372547 SASH1O94885 1247 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 TMC6Q7Z403 805 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 NOL10Q9BSC4 688 aaKnown RBP14.03□□□□□ -0.16
SNX21-205ENST00000372547 AGLP35573 1532 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 USP42Q9H9J4 1324 aaKnown RBP14.03□□□□□ -0.16
SNX21-205ENST00000372547 NEMFO60524 1076 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
SNX21-205ENST00000372547 ISM2Q6H9L7 571 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 DHX40Q8IX18 779 aaKnown RBP14.03□□□□□ -0.16
SNX21-205ENST00000372547 FSIP1Q8NA03 581 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 NEK1Q96PY6 1258 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 SEC62Q99442 399 aaKnown RBP14.03□□□□□ -0.16
SNX21-205ENST00000372547 KDRP35968 1356 aa14.03□□□□□ -0.16
SNX21-205ENST00000372547 HIP1O00291 1037 aa14.02□□□□□ -0.16
SNX21-205ENST00000372547 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.16
SNX21-205ENST00000372547 TEFQ10587 303 aa14.02□□□□□ -0.16
SNX21-205ENST00000372547 PROSER3Q2NL68 480 aa14.02□□□□□ -0.16
SNX21-205ENST00000372547 ERC1Q8IUD2 1116 aa14.02□□□□□ -0.16
SNX21-205ENST00000372547 CEP57L1Q8IYX8 460 aa14.02□□□□□ -0.16
SNX21-205ENST00000372547 ZBTB9Q96C00 473 aa14.02□□□□□ -0.16
SNX21-205ENST00000372547 TIGD1Q96MW7 591 aa14.02□□□□□ -0.16
SNX21-205ENST00000372547 DNAJC2Q99543 621 aaKnown RBP14.02□□□□□ -0.16
SNX21-205ENST00000372547 PLEKHG3A1L390 1219 aa14.02□□□□□ -0.17
SNX21-205ENST00000372547 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.17
SNX21-205ENST00000372547 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
SNX21-205ENST00000372547 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
SNX21-205ENST00000372547 USP28Q96RU2 1077 aa14.02□□□□□ -0.17
SNX21-205ENST00000372547 BICC1Q9H694 974 aaKnown RBP14.02□□□□□ -0.17
SNX21-205ENST00000372547 ANO10Q9NW15 660 aa14.02□□□□□ -0.17
SNX21-205ENST00000372547 AKAP12Q02952 1782 aa14.02□□□□□ -0.17
SNX21-205ENST00000372547 HOXC9P31274 260 aa14.01□□□□□ -0.17
SNX21-205ENST00000372547 ARHGAP29Q52LW3 1261 aa14.01□□□□□ -0.17
SNX21-205ENST00000372547 SARM1Q6SZW1 724 aa14.01□□□□□ -0.17
SNX21-205ENST00000372547 FAM177A1Q8N128 213 aaPredicted RBP14.01□□□□□ -0.17
SNX21-205ENST00000372547 A0A1B0GVL5 298 aa14.01□□□□□ -0.17
SNX21-205ENST00000372547 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
SNX21-205ENST00000372547 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
SNX21-205ENST00000372547 PDIA4P13667 645 aaKnown RBP14.01□□□□□ -0.17
SNX21-205ENST00000372547 SCRN1Q12765 414 aa14.01□□□□□ -0.17
SNX21-205ENST00000372547 SUCLG2Q96I99 432 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms