RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 UBA7P41226 1012 aa27.46■■□□□ 1.99
RAPGEF1-203ENST00000372195 ALG1Q9BT22 464 aa27.46■■□□□ 1.99
RAPGEF1-203ENST00000372195 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.46■■□□□ 1.99
RAPGEF1-203ENST00000372195 PTGS1P23219 599 aa27.46■■□□□ 1.99
RAPGEF1-203ENST00000372195 PDE1AP54750 535 aa27.46■■□□□ 1.99
RAPGEF1-203ENST00000372195 KRT28Q7Z3Y7 464 aa27.46■■□□□ 1.99
RAPGEF1-203ENST00000372195 UVSSAQ2YD98 709 aa27.45■■□□□ 1.99
RAPGEF1-203ENST00000372195 SBNO2Q9Y2G9 1366 aa27.45■■□□□ 1.99
RAPGEF1-203ENST00000372195 MCM5P33992 734 aa27.45■■□□□ 1.98
RAPGEF1-203ENST00000372195 C8orf34Q49A92 452 aa27.45■■□□□ 1.98
RAPGEF1-203ENST00000372195 CCDC150Q8NCX0 1101 aa27.45■■□□□ 1.98
RAPGEF1-203ENST00000372195 ADGRL1O94910 1474 aa27.45■■□□□ 1.98
RAPGEF1-203ENST00000372195 MAP3K1Q13233 1512 aa27.45■■□□□ 1.98
RAPGEF1-203ENST00000372195 AMPD3Q01432 767 aa27.45■■□□□ 1.98
RAPGEF1-203ENST00000372195 ZMYND15Q9H091 742 aa27.45■■□□□ 1.98
RAPGEF1-203ENST00000372195 EXOC1Q9NV70 894 aa27.45■■□□□ 1.98
RAPGEF1-203ENST00000372195 HDAC1Q13547 482 aaPredicted RBP27.44■■□□□ 1.98
RAPGEF1-203ENST00000372195 NOLC1Q14978 699 aaKnown RBP eCLIP27.44■■□□□ 1.98
RAPGEF1-203ENST00000372195 TTC12Q9H892 705 aaPredicted RBP27.44■■□□□ 1.98
RAPGEF1-203ENST00000372195 DACT1Q9NYF0 836 aa27.44■■□□□ 1.98
RAPGEF1-203ENST00000372195 DYNC1I1O14576 645 aa27.44■■□□□ 1.98
RAPGEF1-203ENST00000372195 HMG20BQ9P0W2 317 aa27.44■■□□□ 1.98
RAPGEF1-203ENST00000372195 DNMBPQ6XZF7 1577 aa27.44■■□□□ 1.98
RAPGEF1-203ENST00000372195 WTAPQ15007 396 aa27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 MRPL50Q8N5N7 158 aaKnown RBP27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 DNAI1Q9UI46 699 aa27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 SKILP12757 684 aa27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 PRIM1P49642 420 aaKnown RBP27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 PDE4BQ07343 736 aa27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 CD109Q6YHK3 1445 aa27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 POGZQ7Z3K3 1410 aa27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 KIF5BP33176 963 aa27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 NMIQ13287 307 aaPredicted RBP27.43■■□□□ 1.98
RAPGEF1-203ENST00000372195 TTLL12Q14166 644 aaPredicted RBP27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 ZRANB1Q9UGI0 708 aa27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 SLC4A4Q9Y6R1 1079 aa27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 DCAF8L1A6NGE4 600 aa27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 HOOK3Q86VS8 718 aa27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 IFNL2Q8IZJ0 200 aa27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 TRIM21P19474 475 aaKnown RBP27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 ANKRD13DQ6ZTN6 518 aa27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 ZSCAN16Q9H4T2 348 aaPredicted RBP27.42■■□□□ 1.98
RAPGEF1-203ENST00000372195 TTC16Q8NEE8 873 aa27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 STX8Q9UNK0 236 aa27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 TTC21BQ7Z4L5 1316 aa27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 XAGE3Q8WTP9 111 aa27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 FERMT2Q96AC1 680 aa27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 PSMD1Q99460 953 aa27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 SERPINA10Q9UK55 444 aa27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 F8W031 263 aaPredicted RBP27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 SMC1AQ14683 1233 aaKnown RBP27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 HEATR3Q7Z4Q2 680 aa27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 NAA15Q9BXJ9 866 aaKnown RBP27.41■■□□□ 1.98
RAPGEF1-203ENST00000372195 STAT6P42226 847 aa27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 POTEB2H3BUK9 544 aa27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 EXOC5O00471 708 aa27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 FAM114A1Q8IWE2 563 aa27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 ZGPATQ8N5A5 531 aaKnown RBP27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 PAXBP1Q9Y5B6 917 aa27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 IFIT1BQ5T764 474 aaKnown RBP27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 RGS22Q8NE09 1264 aa27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 ZBTB43O43298 467 aa27.4■■□□□ 1.98
RAPGEF1-203ENST00000372195 RPRD2Q5VT52 1461 aaKnown RBP27.39■■□□□ 1.98
RAPGEF1-203ENST00000372195 F13A1P00488 732 aa27.39■■□□□ 1.98
RAPGEF1-203ENST00000372195 CCDC175P0C221 793 aa27.39■■□□□ 1.98
RAPGEF1-203ENST00000372195 CYP7A1P22680 504 aa27.39■■□□□ 1.98
RAPGEF1-203ENST00000372195 MICALCLQ6ZW33 695 aa27.39■■□□□ 1.98
RAPGEF1-203ENST00000372195 KIF20AO95235 890 aa27.39■■□□□ 1.97
RAPGEF1-203ENST00000372195 BMS1Q14692 1282 aaKnown RBP27.39■■□□□ 1.97
RAPGEF1-203ENST00000372195 KRT24Q2M2I5 525 aa27.38■■□□□ 1.97
RAPGEF1-203ENST00000372195 KANK3Q6NY19 840 aa27.38■■□□□ 1.97
RAPGEF1-203ENST00000372195 COPS6Q7L5N1 327 aa27.38■■□□□ 1.97
RAPGEF1-203ENST00000372195 FEZ1Q99689 392 aa27.38■■□□□ 1.97
RAPGEF1-203ENST00000372195 KIAA0586Q9BVV6 1533 aa27.38■■□□□ 1.97
RAPGEF1-203ENST00000372195 SEC24BO95487 1268 aa27.38■■□□□ 1.97
RAPGEF1-203ENST00000372195 DHX58Q96C10 678 aa27.38■■□□□ 1.97
RAPGEF1-203ENST00000372195 SNRPA1P09661 255 aaKnown RBP27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 TSPY3P0CV98 308 aa27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 TSPY8P0CW00 308 aa27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 RXRAP19793 462 aa27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 ARID5AQ03989 594 aa27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 ACSBG1Q96GR2 724 aa27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 HSF2BPO75031 334 aa27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 CDC5LQ99459 802 aaKnown RBP27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 C14orf93Q9H972 538 aaKnown RBP27.37■■□□□ 1.97
RAPGEF1-203ENST00000372195 MCM6Q14566 821 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 EHMT1Q9H9B1 1298 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 MCMDC2Q4G0Z9 681 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 RLBP1P12271 317 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 APOBRQ0VD83 1088 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 SLF2Q8IX21 1173 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 BICD1Q96G01 975 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 AKR1B10O60218 316 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 SYT1P21579 422 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 RTN1Q16799 776 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 CAPZA3Q96KX2 299 aa27.36■■□□□ 1.97
RAPGEF1-203ENST00000372195 CCDC171Q6TFL3 1326 aa27.35■■□□□ 1.97
RAPGEF1-203ENST00000372195 TSPYL6Q8N831 410 aa27.35■■□□□ 1.97
RAPGEF1-203ENST00000372195 TAOK3Q9H2K8 898 aa27.35■■□□□ 1.97
RAPGEF1-203ENST00000372195 PICALMQ13492 652 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms