RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 SCN7AQ01118 1682 aa12.25□□□□□ -0.45
GTF2B-201ENST00000370500 EIF2S2P20042 333 aaKnown RBP12.24□□□□□ -0.45
GTF2B-201ENST00000370500 PDIA6Q15084 440 aa12.24□□□□□ -0.45
GTF2B-201ENST00000370500 NBPF5PQ86XG9 351 aaPredicted RBP12.24□□□□□ -0.45
GTF2B-201ENST00000370500 NYXQ9GZU5 481 aa12.24□□□□□ -0.45
GTF2B-201ENST00000370500 CRISPLD2Q9H0B8 497 aa12.24□□□□□ -0.45
GTF2B-201ENST00000370500 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
GTF2B-201ENST00000370500 NIP7Q9Y221 180 aaKnown RBP eCLIP12.24□□□□□ -0.45
GTF2B-201ENST00000370500 CHD4Q14839 1912 aa12.23□□□□□ -0.45
GTF2B-201ENST00000370500 CHRNA5P30532 468 aa12.23□□□□□ -0.45
GTF2B-201ENST00000370500 PPP1R15BQ5SWA1 713 aa12.23□□□□□ -0.45
GTF2B-201ENST00000370500 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
GTF2B-201ENST00000370500 TTLL6Q8N841 843 aa12.23□□□□□ -0.45
GTF2B-201ENST00000370500 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
GTF2B-201ENST00000370500 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
GTF2B-201ENST00000370500 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
GTF2B-201ENST00000370500 IL16Q14005 1332 aa12.22□□□□□ -0.45
GTF2B-201ENST00000370500 HLFQ16534 295 aa12.22□□□□□ -0.45
GTF2B-201ENST00000370500 HSP90AB3PQ58FF7 597 aa12.22□□□□□ -0.45
GTF2B-201ENST00000370500 HDGFL1Q5TGJ6 251 aa12.22□□□□□ -0.45
GTF2B-201ENST00000370500 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
GTF2B-201ENST00000370500 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
GTF2B-201ENST00000370500 LRP10Q7Z4F1 713 aa12.22□□□□□ -0.45
GTF2B-201ENST00000370500 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
GTF2B-201ENST00000370500 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
GTF2B-201ENST00000370500 KIAA1551Q9HCM1 1747 aa12.22□□□□□ -0.45
GTF2B-201ENST00000370500 ATP10DQ9P241 1426 aa12.21□□□□□ -0.45
GTF2B-201ENST00000370500 KLRG2A4D1S0 409 aaPredicted RBP12.21□□□□□ -0.45
GTF2B-201ENST00000370500 PARP10Q53GL7 1025 aa12.21□□□□□ -0.45
GTF2B-201ENST00000370500 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.45
GTF2B-201ENST00000370500 STYK1Q6J9G0 422 aa12.21□□□□□ -0.45
GTF2B-201ENST00000370500 TTLL7Q6ZT98 887 aa12.21□□□□□ -0.45
GTF2B-201ENST00000370500 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
GTF2B-201ENST00000370500 WWC3Q9ULE0 1092 aa12.21□□□□□ -0.45
GTF2B-201ENST00000370500 BCORQ6W2J9 1755 aa12.21□□□□□ -0.45
GTF2B-201ENST00000370500 AFDNP55196 1824 aaKnown RBP12.2□□□□□ -0.46
GTF2B-201ENST00000370500 PDE4AP27815 886 aa12.2□□□□□ -0.46
GTF2B-201ENST00000370500 GTF2E1P29083 439 aaPredicted RBP12.2□□□□□ -0.46
GTF2B-201ENST00000370500 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
GTF2B-201ENST00000370500 WDR63Q8IWG1 891 aa12.2□□□□□ -0.46
GTF2B-201ENST00000370500 ZNF34Q8IZ26 560 aa12.2□□□□□ -0.46
GTF2B-201ENST00000370500 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
GTF2B-201ENST00000370500 VPS9D1Q9Y2B5 631 aa12.2□□□□□ -0.46
GTF2B-201ENST00000370500 N4BP2Q86UW6 1770 aaPredicted RBP12.2□□□□□ -0.46
GTF2B-201ENST00000370500 IBTKQ9P2D0 1353 aaPredicted RBP12.2□□□□□ -0.46
GTF2B-201ENST00000370500 SRGNP10124 158 aa12.19□□□□□ -0.46
GTF2B-201ENST00000370500 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
GTF2B-201ENST00000370500 PPP1R42Q7Z4L9 355 aa12.19□□□□□ -0.46
GTF2B-201ENST00000370500 MASTLQ96GX5 879 aa12.19□□□□□ -0.46
GTF2B-201ENST00000370500 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
GTF2B-201ENST00000370500 ZBTB3Q9H5J0 574 aa12.19□□□□□ -0.46
GTF2B-201ENST00000370500 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
GTF2B-201ENST00000370500 NPR1P16066 1061 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 SOGA3Q5TF21 947 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 XAGE3Q8WTP9 111 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 ZNF622Q969S3 477 aaKnown RBP eCLIP12.18□□□□□ -0.46
GTF2B-201ENST00000370500 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 BRCA1P38398 1863 aaKnown RBP12.18□□□□□ -0.46
GTF2B-201ENST00000370500 ALDH1B1P30837 517 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 FAM9BQ8IZU0 186 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 PLBD2Q8NHP8 589 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 NECTIN2Q92692 538 aa12.18□□□□□ -0.46
GTF2B-201ENST00000370500 ADCY9O60503 1353 aa12.17□□□□□ -0.46
GTF2B-201ENST00000370500 ANXA1P04083 346 aa12.17□□□□□ -0.46
GTF2B-201ENST00000370500 PTPREP23469 700 aa12.17□□□□□ -0.46
GTF2B-201ENST00000370500 FOSBP53539 338 aa12.17□□□□□ -0.46
GTF2B-201ENST00000370500 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
GTF2B-201ENST00000370500 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
GTF2B-201ENST00000370500 CCDC24Q8N4L8 307 aa12.17□□□□□ -0.46
GTF2B-201ENST00000370500 RIC1Q4ADV7 1423 aa12.16□□□□□ -0.46
GTF2B-201ENST00000370500 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
GTF2B-201ENST00000370500 GPTP24298 496 aa12.16□□□□□ -0.46
GTF2B-201ENST00000370500 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
GTF2B-201ENST00000370500 SLC10A5Q5PT55 438 aa12.16□□□□□ -0.46
GTF2B-201ENST00000370500 SUSD4Q5VX71 490 aa12.16□□□□□ -0.46
GTF2B-201ENST00000370500 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
GTF2B-201ENST00000370500 UTP14AQ9BVJ6 771 aaKnown RBP12.16□□□□□ -0.46
GTF2B-201ENST00000370500 ZC3H4Q9UPT8 1303 aaKnown RBP12.15□□□□□ -0.46
GTF2B-201ENST00000370500 FAM177BA6PVY3 158 aa12.15□□□□□ -0.46
GTF2B-201ENST00000370500 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
GTF2B-201ENST00000370500 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
GTF2B-201ENST00000370500 NTSR2O95665 410 aa12.15□□□□□ -0.46
GTF2B-201ENST00000370500 TRIM28Q13263 835 aaKnown RBP12.15□□□□□ -0.46
GTF2B-201ENST00000370500 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
GTF2B-201ENST00000370500 LMNB1P20700 586 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 HOXA10P31260 410 aaPredicted RBP12.14□□□□□ -0.47
GTF2B-201ENST00000370500 ERFEQ4G0M1 354 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 PRPF40BQ6NWY9 871 aaKnown RBP12.14□□□□□ -0.47
GTF2B-201ENST00000370500 NLRP10Q86W26 655 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 STK31Q9BXU1 1019 aa12.14□□□□□ -0.47
GTF2B-201ENST00000370500 MYH16Q9H6N6 1097 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms