RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 ADM5C9JUS6 153 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 RAD17O75943 681 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 A1BGP04217 495 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 OTOP1Q7RTM1 612 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 SULF1Q8IWU6 871 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
TUBE1-201ENST00000368657 RPGRQ92834 1020 aaKnown RBP14.22□□□□□ -0.13
TUBE1-201ENST00000368657 CRAMP1Q96RY5 1269 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 NIP7Q9Y221 180 aaKnown RBP eCLIP14.22□□□□□ -0.13
TUBE1-201ENST00000368657 PTPN22Q9Y2R2 807 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 CEP290O15078 2479 aa14.22□□□□□ -0.13
TUBE1-201ENST00000368657 TNNT2P45379 298 aaPredicted RBP14.21□□□□□ -0.13
TUBE1-201ENST00000368657 SREBF2Q12772 1141 aa14.21□□□□□ -0.13
TUBE1-201ENST00000368657 SAMD7Q7Z3H4 446 aa14.21□□□□□ -0.13
TUBE1-201ENST00000368657 AEBP1Q8IUX7 1158 aa14.21□□□□□ -0.13
TUBE1-201ENST00000368657 RBM17Q96I25 401 aaKnown RBP14.21□□□□□ -0.13
TUBE1-201ENST00000368657 SIN3AQ96ST3 1273 aa14.21□□□□□ -0.13
TUBE1-201ENST00000368657 POLR2AP24928 1970 aaKnown RBP14.21□□□□□ -0.13
TUBE1-201ENST00000368657 HEG1Q9ULI3 1381 aa14.21□□□□□ -0.14
TUBE1-201ENST00000368657 MRC1P22897 1456 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 A0A1W2PPC1 479 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 PPEF1O14829 653 aaPredicted RBP14.2□□□□□ -0.14
TUBE1-201ENST00000368657 ALDH1A1P00352 501 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 NEUROD1Q13562 356 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 SULT6B1Q6IMI4 303 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 ZNF496Q96IT1 587 aaPredicted RBP14.2□□□□□ -0.14
TUBE1-201ENST00000368657 RTFDC1Q9BY42 306 aaPredicted RBP14.2□□□□□ -0.14
TUBE1-201ENST00000368657 PRDM6Q9NQX0 595 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 CENPFP49454 3210 aa14.2□□□□□ -0.14
TUBE1-201ENST00000368657 SHTN1A0MZ66 631 aa14.19□□□□□ -0.14
TUBE1-201ENST00000368657 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
TUBE1-201ENST00000368657 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
TUBE1-201ENST00000368657 NYXQ9GZU5 481 aa14.19□□□□□ -0.14
TUBE1-201ENST00000368657 PRO3102Q9H379 93 aa14.19□□□□□ -0.14
TUBE1-201ENST00000368657 HTTP42858 3142 aa14.18□□□□□ -0.14
TUBE1-201ENST00000368657 PRAMEF22A3QJZ6 481 aa14.18□□□□□ -0.14
TUBE1-201ENST00000368657 KIAA2012Q0VF49 1180 aa14.18□□□□□ -0.14
TUBE1-201ENST00000368657 TBC1D10BQ4KMP7 808 aaPredicted RBP14.18□□□□□ -0.14
TUBE1-201ENST00000368657 CDCA5Q96FF9 252 aa14.18□□□□□ -0.14
TUBE1-201ENST00000368657 RANBP2P49792 3224 aaKnown RBP14.18□□□□□ -0.14
TUBE1-201ENST00000368657 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 BRCA2P51587 3418 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 TCERG1O14776 1098 aaKnown RBP14.17□□□□□ -0.14
TUBE1-201ENST00000368657 GPR153Q6NV75 609 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 ZNF790Q6PG37 636 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 NBPF11Q86T75 865 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 DPF3Q92784 378 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 R3HDMLQ9H3Y0 253 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 STXBP5LQ9Y2K9 1186 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 ATP6V0A2Q9Y487 856 aa14.17□□□□□ -0.14
TUBE1-201ENST00000368657 RPS12P25398 132 aaKnown RBP14.16□□□□□ -0.14
TUBE1-201ENST00000368657 ERO1AQ96HE7 468 aa14.16□□□□□ -0.14
TUBE1-201ENST00000368657 FMNL2Q96PY5 1086 aa14.16□□□□□ -0.14
TUBE1-201ENST00000368657 SLC4A8Q2Y0W8 1093 aa14.15□□□□□ -0.14
TUBE1-201ENST00000368657 RBM26Q5T8P6 1007 aaKnown RBP14.15□□□□□ -0.14
TUBE1-201ENST00000368657 ZNF333Q96JL9 665 aa14.15□□□□□ -0.14
TUBE1-201ENST00000368657 INHBEP58166 350 aa14.14□□□□□ -0.15
TUBE1-201ENST00000368657 DPP8Q6V1X1 898 aaPredicted RBP14.14□□□□□ -0.15
TUBE1-201ENST00000368657 UNC80Q8N2C7 3258 aa14.14□□□□□ -0.15
TUBE1-201ENST00000368657 EGFRP00533 1210 aa14.13□□□□□ -0.15
TUBE1-201ENST00000368657 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
TUBE1-201ENST00000368657 MPNDQ8N594 471 aa14.13□□□□□ -0.15
TUBE1-201ENST00000368657 EFCC1Q9HA90 598 aa14.13□□□□□ -0.15
TUBE1-201ENST00000368657 NR2E3Q9Y5X4 410 aa14.13□□□□□ -0.15
TUBE1-201ENST00000368657 RIC1Q4ADV7 1423 aa14.13□□□□□ -0.15
TUBE1-201ENST00000368657 YDJCA8MPS7 323 aa14.12□□□□□ -0.15
TUBE1-201ENST00000368657 UBE2Q2LH0YL09 131 aa14.12□□□□□ -0.15
TUBE1-201ENST00000368657 LRCH3Q96II8 777 aa14.12□□□□□ -0.15
TUBE1-201ENST00000368657 GGA3Q9NZ52 723 aa14.12□□□□□ -0.15
TUBE1-201ENST00000368657 PSMD14O00487 310 aa14.11□□□□□ -0.15
TUBE1-201ENST00000368657 SOX1O00570 391 aaPredicted RBP14.11□□□□□ -0.15
TUBE1-201ENST00000368657 BBOX1O75936 387 aa14.11□□□□□ -0.15
TUBE1-201ENST00000368657 TEFQ10587 303 aa14.11□□□□□ -0.15
TUBE1-201ENST00000368657 KIF4BQ2VIQ3 1234 aa14.11□□□□□ -0.15
TUBE1-201ENST00000368657 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
TUBE1-201ENST00000368657 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.11□□□□□ -0.15
TUBE1-201ENST00000368657 SP8Q8IXZ3 490 aa14.11□□□□□ -0.15
TUBE1-201ENST00000368657 USP16Q9Y5T5 823 aa14.11□□□□□ -0.15
TUBE1-201ENST00000368657 TCIRG1Q13488 830 aa14.1□□□□□ -0.15
TUBE1-201ENST00000368657 ARHGEF6Q15052 776 aa14.1□□□□□ -0.15
TUBE1-201ENST00000368657 DEFB123Q8N688 67 aa14.1□□□□□ -0.15
TUBE1-201ENST00000368657 HTATIP2Q9BUP3 242 aa14.1□□□□□ -0.15
TUBE1-201ENST00000368657 HLFQ16534 295 aa14.09□□□□□ -0.15
TUBE1-201ENST00000368657 SLC9C1Q4G0N8 1177 aa14.09□□□□□ -0.15
TUBE1-201ENST00000368657 MOB2Q70IA6 237 aa14.09□□□□□ -0.15
TUBE1-201ENST00000368657 SLC51AQ86UW1 340 aa14.09□□□□□ -0.15
TUBE1-201ENST00000368657 ABCC12Q96J65 1359 aa14.09□□□□□ -0.15
TUBE1-201ENST00000368657 WTIPA6NIX2 430 aaPredicted RBP14.08□□□□□ -0.16
TUBE1-201ENST00000368657 COL9A1P20849 921 aa14.08□□□□□ -0.16
TUBE1-201ENST00000368657 PIP4K2AP48426 406 aaPredicted RBP14.08□□□□□ -0.16
TUBE1-201ENST00000368657 MTHFSDQ2M296 383 aaKnown RBP14.08□□□□□ -0.16
TUBE1-201ENST00000368657 CD99L2Q8TCZ2 262 aa14.08□□□□□ -0.16
TUBE1-201ENST00000368657 NECTIN2Q92692 538 aa14.08□□□□□ -0.16
TUBE1-201ENST00000368657 NLRP3Q96P20 1036 aa14.08□□□□□ -0.16
TUBE1-201ENST00000368657 MANSC4A6NHS7 340 aaPredicted RBP14.07□□□□□ -0.16
TUBE1-201ENST00000368657 IL13P35225 146 aa14.07□□□□□ -0.16
TUBE1-201ENST00000368657 MKRN3Q13064 507 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms