RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 PLA2G2CQ5R387 149 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 BPHLQ86WA6 291 aaPredicted RBP8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 NGDNQ8NEJ9 315 aaKnown RBP8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 BAP1Q92560 729 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 C10orf71Q711Q0 1435 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 BTAF1O14981 1849 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 KIF1BO60333 1816 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 PIK3C2GO75747 1445 aa8.92□□□□□ -0.98
ECHDC1-202ENST00000368289 BRD4O60885 1362 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-202ENST00000368289 ZBBXA8MT70 800 aa8.92□□□□□ -0.98
ECHDC1-202ENST00000368289 AGERQ15109 404 aa8.92□□□□□ -0.98
ECHDC1-202ENST00000368289 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
ECHDC1-202ENST00000368289 WNK3Q9BYP7 1800 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 AKAP12Q02952 1782 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 PXDNLA1KZ92 1463 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 ROCK1Q13464 1354 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 TONSLQ96HA7 1378 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 CCDC85CA6NKD9 419 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 TOM1L2Q6ZVM7 507 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 SMC1BQ8NDV3 1235 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 ARHGAP9Q9BRR9 750 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 MKRN1Q9UHC7 482 aaKnown RBP8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 V9GY48 417 aaPredicted RBP8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 COL18A1P39060 1754 aa8.91□□□□□ -0.98
ECHDC1-202ENST00000368289 ANKRD30BQ9BXX2 1392 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 WDR17Q8IZU2 1322 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 EXOC5O00471 708 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 TRAK2O60296 914 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 RGS20O76081 388 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 HSPA8P11142 646 aaKnown RBP8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 CTCFP49711 727 aaPredicted RBP8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 MCCD1P59942 119 aaPredicted RBP8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 NR1H3Q13133 447 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 SLC27A3Q5K4L6 730 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 LIAT1Q6ZQX7 453 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 ZBTB33Q86T24 672 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 C16orf71Q8IYS4 520 aaPredicted RBP8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 QRICH2Q9H0J4 1663 aa8.9□□□□□ -0.98
ECHDC1-202ENST00000368289 SOX11P35716 441 aa8.89□□□□□ -0.99
ECHDC1-202ENST00000368289 SH3BP2P78314 561 aa8.89□□□□□ -0.99
ECHDC1-202ENST00000368289 EIF4G2P78344 907 aaKnown RBP eCLIP8.89□□□□□ -0.99
ECHDC1-202ENST00000368289 IRF5Q13568 498 aa8.89□□□□□ -0.99
ECHDC1-202ENST00000368289 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
ECHDC1-202ENST00000368289 YTHDC1Q96MU7 727 aaKnown RBP8.89□□□□□ -0.99
ECHDC1-202ENST00000368289 C14orf93Q9H972 538 aaKnown RBP8.89□□□□□ -0.99
ECHDC1-202ENST00000368289 WASLO00401 505 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-202ENST00000368289 CFAP70Q5T0N1 1121 aa8.88□□□□□ -0.99
ECHDC1-202ENST00000368289 SPRYD7Q5W111 196 aa8.88□□□□□ -0.99
ECHDC1-202ENST00000368289 CDCA7Q9BWT1 371 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-202ENST00000368289 CARD10Q9BWT7 1032 aa8.88□□□□□ -0.99
ECHDC1-202ENST00000368289 PRKD2Q9BZL6 878 aa8.88□□□□□ -0.99
ECHDC1-202ENST00000368289 BRCA2P51587 3418 aa8.88□□□□□ -0.99
ECHDC1-202ENST00000368289 KIAA1551Q9HCM1 1747 aa8.88□□□□□ -0.99
ECHDC1-202ENST00000368289 NSD2O96028 1365 aa8.87□□□□□ -0.99
ECHDC1-202ENST00000368289 RANBP2P49792 3224 aaKnown RBP8.87□□□□□ -0.99
ECHDC1-202ENST00000368289 POTECB2RU33 542 aa8.87□□□□□ -0.99
ECHDC1-202ENST00000368289 VARSP26640 1264 aaKnown RBP8.87□□□□□ -0.99
ECHDC1-202ENST00000368289 SH3BP5LQ7L8J4 393 aa8.87□□□□□ -0.99
ECHDC1-202ENST00000368289 ZNF598Q86UK7 904 aaKnown RBP8.87□□□□□ -0.99
ECHDC1-202ENST00000368289 ABTB2Q8N961 1025 aa8.87□□□□□ -0.99
ECHDC1-202ENST00000368289 SPATA31E1Q6ZUB1 1445 aa8.87□□□□□ -0.99
ECHDC1-202ENST00000368289 POLR3AO14802 1390 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-202ENST00000368289 ANP32CO43423 234 aa8.86□□□□□ -0.99
ECHDC1-202ENST00000368289 GPR37L1O60883 481 aa8.86□□□□□ -0.99
ECHDC1-202ENST00000368289 FBXO45P0C2W1 286 aa8.86□□□□□ -0.99
ECHDC1-202ENST00000368289 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
ECHDC1-202ENST00000368289 SH3RF1Q7Z6J0 888 aa8.86□□□□□ -0.99
ECHDC1-202ENST00000368289 TRPM1Q7Z4N2 1603 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 MAGEB6P1A0A0J9YX57 407 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 VEGFBP49765 207 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 VAC14Q08AM6 782 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 RGL3Q3MIN7 710 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 EHBP1Q8NDI1 1231 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 FAM174AQ8TBP5 190 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 FOXJ1Q92949 421 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 NUDT16Q96DE0 195 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 CNTNAP1P78357 1384 aa8.85□□□□□ -0.99
ECHDC1-202ENST00000368289 ACEP12821 1306 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 A0A0G2JLW4 131 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 ZBTB7CA1YPR0 619 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 VCANP13611 3396 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 SEMA3FQ13275 785 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 RC3H1Q5TC82 1133 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 ZNF697Q5TEC3 545 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 ADAM32Q8TC27 787 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 EMID1Q96A84 441 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 SIN3AQ96ST3 1273 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 ABCC6O95255 1503 aa8.84□□□□□ -0.99
ECHDC1-202ENST00000368289 PPIP5K1Q6PFW1 1433 aa8.83□□□□□ -1
ECHDC1-202ENST00000368289 WNT7AO00755 349 aa8.83□□□□□ -1
ECHDC1-202ENST00000368289 KCNA3P22001 575 aa8.83□□□□□ -1
ECHDC1-202ENST00000368289 SKOR1P84550 965 aa8.83□□□□□ -1
ECHDC1-202ENST00000368289 DZIP3Q86Y13 1208 aaKnown RBP8.83□□□□□ -1
ECHDC1-202ENST00000368289 CARD14Q9BXL6 1004 aa8.83□□□□□ -1
ECHDC1-202ENST00000368289 BCS1LQ9Y276 419 aa8.83□□□□□ -1
ECHDC1-202ENST00000368289 POGKQ9P215 609 aa8.82□□□□□ -1
ECHDC1-202ENST00000368289 PCDHB9Q9Y5E1 797 aa8.82□□□□□ -1
ECHDC1-202ENST00000368289 KAT6BQ8WYB5 2073 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms