RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 CICQ96RK0 1608 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-203ENST00000367367 LAMB4A4D0S4 1761 aa4.15□□□□□ -1.74
PTPRC-203ENST00000367367 R3HDM1Q15032 1099 aaKnown RBP4.15□□□□□ -1.74
PTPRC-203ENST00000367367 AMOTQ4VCS5 1084 aa4.15□□□□□ -1.74
PTPRC-203ENST00000367367 CCDC184Q52MB2 194 aa4.15□□□□□ -1.74
PTPRC-203ENST00000367367 PIGBQ92521 554 aa4.15□□□□□ -1.74
PTPRC-203ENST00000367367 LRRC4BQ9NT99 713 aa4.15□□□□□ -1.74
PTPRC-203ENST00000367367 TMOD3Q9NYL9 352 aa4.15□□□□□ -1.74
PTPRC-203ENST00000367367 MAP3K5Q99683 1374 aa4.15□□□□□ -1.74
PTPRC-203ENST00000367367 POTECB2RU33 542 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 BCAMP50895 628 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 AKAP4Q5JQC9 854 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 METTL3Q86U44 580 aaKnown RBP4.15□□□□□ -1.75
PTPRC-203ENST00000367367 DCAF5Q96JK2 942 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 NBPF3Q9H094 633 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 LGR6Q9HBX8 967 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 ASAP1Q9ULH1 1129 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 PDZRN3Q9UPQ7 1066 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 PCDHB15Q9Y5E8 787 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 LRP5O75197 1615 aa4.15□□□□□ -1.75
PTPRC-203ENST00000367367 COL24A1Q17RW2 1714 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 KCPQ6ZWJ8 1503 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 HSP90AB1P08238 724 aaKnown RBP4.14□□□□□ -1.75
PTPRC-203ENST00000367367 KCNA1Q09470 495 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 CCDC146Q8IYE0 955 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 NFATC2IPQ8NCF5 419 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 ANKK1Q8NFD2 765 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 EPS8L1Q8TE68 723 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 PDGFDQ9GZP0 370 aaPredicted RBP4.14□□□□□ -1.75
PTPRC-203ENST00000367367 CCNL1Q9UK58 526 aaPredicted RBP4.14□□□□□ -1.75
PTPRC-203ENST00000367367 SENP3-EIF4A1A0A087X0R7 540 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 PALM3A6NDB9 673 aaPredicted RBP4.14□□□□□ -1.75
PTPRC-203ENST00000367367 GNAT3A8MTJ3 354 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 ANP32CO43423 234 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 CLCN1P35523 988 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 CABP4P57796 275 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 DCTN1Q14203 1278 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 ZNF827Q17R98 1081 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 CSPP1Q1MSJ5 1256 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 RTL5Q5HYW3 569 aaPredicted RBP4.14□□□□□ -1.75
PTPRC-203ENST00000367367 GAS2L2Q8NHY3 880 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 MRRFQ96E11 262 aaKnown RBP4.14□□□□□ -1.75
PTPRC-203ENST00000367367 PLEKHF1Q96S99 279 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 PPP1R12CQ9BZL4 782 aa4.14□□□□□ -1.75
PTPRC-203ENST00000367367 CEMIPQ8WUJ3 1361 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 MAPK8IP3Q9UPT6 1336 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 AFDNP55196 1824 aaKnown RBP4.13□□□□□ -1.75
PTPRC-203ENST00000367367 RBM47A0AV96 593 aaKnown RBP4.13□□□□□ -1.75
PTPRC-203ENST00000367367 ERVV-2B6SEH9 535 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 RNMTO43148 476 aaKnown RBP4.13□□□□□ -1.75
PTPRC-203ENST00000367367 PTCD1O75127 700 aaKnown RBP4.13□□□□□ -1.75
PTPRC-203ENST00000367367 MAP3K9P80192 1104 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 SLC39A6Q13433 755 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 WDR43Q15061 677 aaKnown RBP eCLIP4.13□□□□□ -1.75
PTPRC-203ENST00000367367 PPP2R2DQ66LE6 453 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 MCM10Q7L590 875 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 IL17REQ8NFR9 667 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 PTCD2Q8WV60 388 aaKnown RBP4.13□□□□□ -1.75
PTPRC-203ENST00000367367 ZBED2Q9BTP6 218 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 SLC52A2Q9HAB3 445 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 ATG3Q9NT62 314 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 CACNA1SQ13698 1873 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 NUP98P52948 1817 aa4.13□□□□□ -1.75
PTPRC-203ENST00000367367 LOC102724428A0A0B4J2F2 783 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 SIK1P57059 783 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 VAC14Q08AM6 782 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 ITPK1Q13572 414 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 SLC15A2Q16348 729 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 SLC27A3Q5K4L6 730 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 NBPF14Q5TI25 921 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 SLC4A9Q96Q91 983 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 THUMPD2Q9BTF0 503 aaKnown RBP4.12□□□□□ -1.75
PTPRC-203ENST00000367367 MRS2Q9HD23 443 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 ADAMTS8Q9UP79 889 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 RRP7AQ9Y3A4 280 aaKnown RBP4.12□□□□□ -1.75
PTPRC-203ENST00000367367 CACNA1FO60840 1977 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 BCORQ6W2J9 1755 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 C3orf80F5H4A9 247 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 SMARCA5O60264 1052 aaPredicted RBP4.12□□□□□ -1.75
PTPRC-203ENST00000367367 NEFMP07197 916 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 ATP6V1AP38606 617 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 TEFQ10587 303 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 SMIM5Q71RC9 77 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 AMIGO3Q86WK7 504 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 ZNF454Q8N9F8 522 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 LINC00116Q8NCU8 138 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 BANK1Q8NDB2 785 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 RTF1Q92541 710 aaKnown RBP4.12□□□□□ -1.75
PTPRC-203ENST00000367367 SMARCC1Q92922 1105 aaPredicted RBP4.12□□□□□ -1.75
PTPRC-203ENST00000367367 TRIM34Q9BYJ4 488 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 STK32BQ9NY57 414 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 SCN7AQ01118 1682 aa4.12□□□□□ -1.75
PTPRC-203ENST00000367367 PNPLA7Q6ZV29 1317 aa4.11□□□□□ -1.75
PTPRC-203ENST00000367367 PHF14O94880 888 aa4.11□□□□□ -1.75
PTPRC-203ENST00000367367 ZNF16P17020 682 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-203ENST00000367367 NDUFV2P19404 249 aa4.11□□□□□ -1.75
PTPRC-203ENST00000367367 NFE2L2Q16236 605 aa4.11□□□□□ -1.75
PTPRC-203ENST00000367367 PRR7Q8TB68 274 aa4.11□□□□□ -1.75
PTPRC-203ENST00000367367 STK32AQ8WU08 396 aa4.11□□□□□ -1.75
PTPRC-203ENST00000367367 VRTNQ9H8Y1 702 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms