RNA–Protein interactions for RNA: ENST00000366822.2

LINC01558-201, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2

Gene LINC01558, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-201ENST00000366822 DDX60Q8IY21 1712 aaKnown RBP21.96■■□□□ 1.11
LINC01558-201ENST00000366822 BRCA1P38398 1863 aaKnown RBP21.96■■□□□ 1.11
LINC01558-201ENST00000366822 SF3B3Q15393 1217 aaKnown RBP21.95■■□□□ 1.1
LINC01558-201ENST00000366822 CEP85Q6P2H3 762 aa21.95■■□□□ 1.1
LINC01558-201ENST00000366822 C3orf67Q6ZVT6 689 aa21.95■■□□□ 1.1
LINC01558-201ENST00000366822 TTLL11Q8NHH1 800 aa21.95■■□□□ 1.1
LINC01558-201ENST00000366822 C10orf71Q711Q0 1435 aa21.95■■□□□ 1.1
LINC01558-201ENST00000366822 KLRG2A4D1S0 409 aaPredicted RBP21.94■■□□□ 1.1
LINC01558-201ENST00000366822 ATP8B2P98198 1209 aa21.94■■□□□ 1.1
LINC01558-201ENST00000366822 MTX1Q13505 466 aa21.94■■□□□ 1.1
LINC01558-201ENST00000366822 LMBR1LQ6UX01 489 aa21.94■■□□□ 1.1
LINC01558-201ENST00000366822 RPAP2Q8IXW5 612 aaPredicted RBP21.94■■□□□ 1.1
LINC01558-201ENST00000366822 PCDHB15Q9Y5E8 787 aa21.94■■□□□ 1.1
LINC01558-201ENST00000366822 TNRC6CQ9HCJ0 1690 aaKnown RBP21.93■■□□□ 1.1
LINC01558-201ENST00000366822 PDE6BP35913 854 aa21.92■■□□□ 1.1
LINC01558-201ENST00000366822 CRY2Q49AN0 593 aa21.92■■□□□ 1.1
LINC01558-201ENST00000366822 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
LINC01558-201ENST00000366822 CCDC152Q4G0S7 254 aa21.91■■□□□ 1.1
LINC01558-201ENST00000366822 NLGN2Q8NFZ4 835 aa21.91■■□□□ 1.1
LINC01558-201ENST00000366822 ANKRD31Q8N7Z5 1873 aa21.9■■□□□ 1.1
LINC01558-201ENST00000366822 SIRT2Q8IXJ6 389 aa21.9■■□□□ 1.1
LINC01558-201ENST00000366822 CD2APQ9Y5K6 639 aa21.9■■□□□ 1.1
LINC01558-201ENST00000366822 PNMA6EA0A0J9YXQ4 647 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 SRGAP3O43295 1099 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 POLA2Q14181 598 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 FAM161AQ3B820 660 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 SSH3Q8TE77 659 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 CCDC85AQ96PX6 553 aaPredicted RBP21.89■■□□□ 1.09
LINC01558-201ENST00000366822 GREM2Q9H772 168 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 PDZRN3Q9UPQ7 1066 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 CHMP3Q9Y3E7 222 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 UTRNP46939 3433 aa21.89■■□□□ 1.09
LINC01558-201ENST00000366822 RFX5P48382 616 aaPredicted RBP21.88■■□□□ 1.09
LINC01558-201ENST00000366822 DLEC1Q9Y238 1755 aa21.88■■□□□ 1.09
LINC01558-201ENST00000366822 GOLGB1Q14789 3259 aaKnown RBP21.87■■□□□ 1.09
LINC01558-201ENST00000366822 MYH3P11055 1940 aa21.87■■□□□ 1.09
LINC01558-201ENST00000366822 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
LINC01558-201ENST00000366822 ANKRD18BA2A2Z9 1011 aa21.86■■□□□ 1.09
LINC01558-201ENST00000366822 HMMRO75330 724 aa21.86■■□□□ 1.09
LINC01558-201ENST00000366822 SRGNP10124 158 aa21.86■■□□□ 1.09
LINC01558-201ENST00000366822 ITGA6P23229 1130 aa21.86■■□□□ 1.09
LINC01558-201ENST00000366822 IFIT5Q13325 482 aaKnown RBP21.86■■□□□ 1.09
LINC01558-201ENST00000366822 CCDC57Q2TAC2 916 aa21.86■■□□□ 1.09
LINC01558-201ENST00000366822 C2CD5Q86YS7 1000 aa21.86■■□□□ 1.09
LINC01558-201ENST00000366822 HDAC1Q13547 482 aaPredicted RBP21.85■■□□□ 1.09
LINC01558-201ENST00000366822 DDX46Q7L014 1031 aaKnown RBP21.85■■□□□ 1.09
LINC01558-201ENST00000366822 RPGRQ92834 1020 aaKnown RBP21.85■■□□□ 1.09
LINC01558-201ENST00000366822 SEC31BQ9NQW1 1179 aa21.85■■□□□ 1.09
LINC01558-201ENST00000366822 ARFGEF1Q9Y6D6 1849 aa21.85■■□□□ 1.09
LINC01558-201ENST00000366822 H0YIN7 160 aa21.84■■□□□ 1.09
LINC01558-201ENST00000366822 NPR1P16066 1061 aa21.84■■□□□ 1.09
LINC01558-201ENST00000366822 TGFB2P61812 414 aa21.84■■□□□ 1.09
LINC01558-201ENST00000366822 MASTLQ96GX5 879 aa21.84■■□□□ 1.09
LINC01558-201ENST00000366822 RBM17Q96I25 401 aaKnown RBP21.84■■□□□ 1.09
LINC01558-201ENST00000366822 COPRSQ9NQ92 184 aa21.84■■□□□ 1.09
LINC01558-201ENST00000366822 GRIN3BO60391 1043 aa21.83■■□□□ 1.09
LINC01558-201ENST00000366822 PTPN12Q05209 780 aaKnown RBP21.83■■□□□ 1.09
LINC01558-201ENST00000366822 STYK1Q6J9G0 422 aa21.83■■□□□ 1.09
LINC01558-201ENST00000366822 CRAMP1Q96RY5 1269 aa21.83■■□□□ 1.09
LINC01558-201ENST00000366822 CDC5LQ99459 802 aaKnown RBP21.83■■□□□ 1.09
LINC01558-201ENST00000366822 CHRNA5P30532 468 aa21.82■■□□□ 1.08
LINC01558-201ENST00000366822 GRAPQ13588 217 aa21.82■■□□□ 1.08
LINC01558-201ENST00000366822 GRAPLQ8TC17 118 aaPredicted RBP21.82■■□□□ 1.08
LINC01558-201ENST00000366822 CELF1Q92879 486 aaKnown RBP21.82■■□□□ 1.08
LINC01558-201ENST00000366822 RWDD1Q9H446 243 aaPredicted RBP21.82■■□□□ 1.08
LINC01558-201ENST00000366822 PPP4R2Q9NY27 417 aa21.82■■□□□ 1.08
LINC01558-201ENST00000366822 COL11A2P13942 1736 aaPredicted RBP21.82■■□□□ 1.08
LINC01558-201ENST00000366822 KLHDC4Q8TBB5 520 aa21.81■■□□□ 1.08
LINC01558-201ENST00000366822 ZNF594Q96JF6 807 aaPredicted RBP21.81■■□□□ 1.08
LINC01558-201ENST00000366822 PA2G4Q9UQ80 394 aaKnown RBP21.81■■□□□ 1.08
LINC01558-201ENST00000366822 NOP58Q9Y2X3 529 aaKnown RBP21.81■■□□□ 1.08
LINC01558-201ENST00000366822 COL4A1P02462 1669 aa21.8■■□□□ 1.08
LINC01558-201ENST00000366822 IGHDP01880 384 aa21.8■■□□□ 1.08
LINC01558-201ENST00000366822 DPEP1P16444 411 aa21.8■■□□□ 1.08
LINC01558-201ENST00000366822 RPS8P62241 208 aaKnown RBP21.8■■□□□ 1.08
LINC01558-201ENST00000366822 TAF7LQ5H9L4 462 aa21.8■■□□□ 1.08
LINC01558-201ENST00000366822 ANKRD18AQ8IVF6 992 aa21.8■■□□□ 1.08
LINC01558-201ENST00000366822 KCNA3P22001 575 aa21.79■■□□□ 1.08
LINC01558-201ENST00000366822 ALDH1B1P30837 517 aa21.79■■□□□ 1.08
LINC01558-201ENST00000366822 IGHMBP2P38935 993 aaKnown RBP21.79■■□□□ 1.08
LINC01558-201ENST00000366822 ZNF622Q969S3 477 aaKnown RBP eCLIP21.79■■□□□ 1.08
LINC01558-201ENST00000366822 DCTPP1Q9H773 170 aa21.79■■□□□ 1.08
LINC01558-201ENST00000366822 FBXO3Q9UK99 471 aa21.79■■□□□ 1.08
LINC01558-201ENST00000366822 A0A0G2JLW4 131 aa21.78■■□□□ 1.08
LINC01558-201ENST00000366822 CNKSR1Q969H4 720 aa21.78■■□□□ 1.08
LINC01558-201ENST00000366822 EYA2O00167 538 aa21.77■■□□□ 1.08
LINC01558-201ENST00000366822 SURF6O75683 361 aaKnown RBP21.77■■□□□ 1.08
LINC01558-201ENST00000366822 BBOX1O75936 387 aa21.77■■□□□ 1.08
LINC01558-201ENST00000366822 CIAO1O76071 339 aa21.77■■□□□ 1.08
LINC01558-201ENST00000366822 YBX3P16989 372 aaKnown RBP eCLIP21.77■■□□□ 1.08
LINC01558-201ENST00000366822 BSDC1Q9NW68 430 aaPredicted RBP21.77■■□□□ 1.08
LINC01558-201ENST00000366822 GTF3C3Q9Y5Q9 886 aa21.77■■□□□ 1.08
LINC01558-201ENST00000366822 CACNA1SQ13698 1873 aa21.76■■□□□ 1.07
LINC01558-201ENST00000366822 LRRC24Q50LG9 513 aa21.76■■□□□ 1.07
LINC01558-201ENST00000366822 LDHAL6AQ6ZMR3 332 aa21.76■■□□□ 1.07
LINC01558-201ENST00000366822 CCDC136Q96JN2 1154 aa21.76■■□□□ 1.07
LINC01558-201ENST00000366822 MPHOSPH8Q99549 860 aa21.76■■□□□ 1.07
LINC01558-201ENST00000366822 PUS3Q9BZE2 481 aaKnown RBP21.76■■□□□ 1.07
LINC01558-201ENST00000366822 G3BP1Q13283 466 aaKnown RBP eCLIP21.75■■□□□ 1.07
LINC01558-201ENST00000366822 HSP90AB4PQ58FF6 505 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms