RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 USP48Q86UV5 1035 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 GALNT12Q8IXK2 581 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 ZNF654Q8IZM8 581 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 CEP63Q96MT8 703 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 CRISPLD1Q9H336 500 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 SRA1Q9HD15 236 aaKnown RBP7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 PRKAG2Q9UGJ0 569 aa7.07□□□□□ -1.28
RNU6-1339P-201ENST00000363574 SOS2Q07890 1332 aaPredicted RBP7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 ST13P50502 369 aaKnown RBP7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 TAF1CQ15572 869 aaPredicted RBP7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 GMLQ99445 158 aa7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 BCO2Q9BYV7 579 aa7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 SRCIN1Q9C0H9 1055 aa7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 RUBCNLQ9H714 662 aa7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 ABI2Q9NYB9 513 aaPredicted RBP7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 GGT7Q9UJ14 662 aa7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 GJA3Q9Y6H8 435 aa7.06□□□□□ -1.28
RNU6-1339P-201ENST00000363574 FIGNL2A6NMB9 653 aa7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 VEGFBP49765 207 aa7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 GNL2Q13823 731 aaKnown RBP7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 FAM177A1Q8N128 213 aaPredicted RBP7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 ZCCHC2Q9C0B9 1178 aaKnown RBP7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 GPAMQ9HCL2 828 aa7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 C11orf16Q9NQ32 467 aa7.05□□□□□ -1.28
RNU6-1339P-201ENST00000363574 GADD45BO75293 160 aaPredicted RBP7.04□□□□□ -1.28
RNU6-1339P-201ENST00000363574 BMP1P13497 986 aa7.04□□□□□ -1.28
RNU6-1339P-201ENST00000363574 GRM2Q14416 872 aa7.04□□□□□ -1.28
RNU6-1339P-201ENST00000363574 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
RNU6-1339P-201ENST00000363574 NLRP8Q86W28 1048 aa7.04□□□□□ -1.28
RNU6-1339P-201ENST00000363574 SUV39H2Q9H5I1 410 aa7.04□□□□□ -1.28
RNU6-1339P-201ENST00000363574 INPP5FQ9Y2H2 1132 aa7.04□□□□□ -1.28
RNU6-1339P-201ENST00000363574 POTECB2RU33 542 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 F11P03951 625 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 ATP2B1P20020 1258 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 CES1P23141 567 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 DNAJA1P31689 397 aaKnown RBP7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 SCARF1Q14162 830 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 ERMP1Q7Z2K6 904 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 TRIM46Q7Z4K8 759 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 DHX38Q92620 1227 aaKnown RBP7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 PMEPA1Q969W9 287 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 DNAJC2Q99543 621 aaKnown RBP7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 DYRK1BQ9Y463 629 aa7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.03□□□□□ -1.28
RNU6-1339P-201ENST00000363574 AVPP01185 164 aa7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 CYP2E1P05181 493 aaPredicted RBP7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 KCNQ4P56696 695 aa7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 ARID5AQ03989 594 aa7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 TTC39BQ5VTQ0 682 aaPredicted RBP7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 KIAA0319Q5VV43 1072 aa7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 DPH6Q7L8W6 267 aa7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 PGBD3Q8N328 593 aa7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 GLIS3Q8NEA6 775 aa7.02□□□□□ -1.29
RNU6-1339P-201ENST00000363574 A0A1W2PP55 124 aa7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 PEAR1Q5VY43 1037 aaPredicted RBP7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 C3orf58Q8NDZ4 430 aa7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 ARMC5Q96C12 935 aa7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 COPRSQ9NQ92 184 aa7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 LATS2Q9NRM7 1088 aa7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 DNMT3LQ9UJW3 386 aa7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 KCNH4Q9UQ05 1017 aa7.01□□□□□ -1.29
RNU6-1339P-201ENST00000363574 FAM187AA6NFU0 413 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 SMARCA5O60264 1052 aaPredicted RBP7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 SASH3O75995 380 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 THBS1P07996 1170 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 GSTT1P30711 240 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 GJA8P48165 433 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 SFSWAPQ12872 951 aaKnown RBP7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 GAS2L1Q99501 681 aaPredicted RBP7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 LNPKQ9C0E8 428 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 EHD4Q9H223 541 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 CUEDC1Q9NWM3 386 aaPredicted RBP7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 KANSL3Q9P2N6 904 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 PDZRN3Q9UPQ7 1066 aa7□□□□□ -1.29
RNU6-1339P-201ENST00000363574 SENP3-EIF4A1A0A087X0R7 540 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 EFSO43281 561 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 FAM157BP0CG42 384 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 EDN3P14138 238 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 TARSP26639 723 aaKnown RBP6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 PAK2Q13177 524 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 CCINQ13939 588 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 EFHC2Q5JST6 749 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 KRT25Q7Z3Z0 450 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 OR13H1Q8NG92 308 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 SPATA32Q96LK8 384 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 ZFP42Q96MM3 310 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 NOC4LQ9BVI4 516 aaKnown RBP6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 GSX2Q9BZM3 304 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 SALL4Q9UJQ4 1053 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 TRAK1Q9UPV9 953 aa6.99□□□□□ -1.29
RNU6-1339P-201ENST00000363574 ATXN7O15265 892 aaPredicted RBP6.98□□□□□ -1.29
RNU6-1339P-201ENST00000363574 MMP20O60882 483 aa6.98□□□□□ -1.29
RNU6-1339P-201ENST00000363574 FGRP09769 529 aa6.98□□□□□ -1.29
RNU6-1339P-201ENST00000363574 SMCPP49901 116 aaPredicted RBP6.98□□□□□ -1.29
RNU6-1339P-201ENST00000363574 MAP3K10Q02779 954 aa6.98□□□□□ -1.29
RNU6-1339P-201ENST00000363574 LBRQ14739 615 aaKnown RBP6.98□□□□□ -1.29
RNU6-1339P-201ENST00000363574 PRPF40BQ6NWY9 871 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms