RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 MYL6BP14649 208 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 CREB3L3Q68CJ9 461 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 LRRC2Q9BYS8 371 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
SMC3-201ENST00000361804 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 KDM4AO75164 1064 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 FUCA2Q9BTY2 467 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 COL15A1P39059 1388 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 LARP1BQ659C4 914 aaKnown RBP12.64□□□□□ -0.39
SMC3-201ENST00000361804 CCDC129Q6ZRS4 1044 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 TMEM87AQ8NBN3 555 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 NRAPQ86VF7 1730 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
SMC3-201ENST00000361804 CEBPZQ03701 1054 aaKnown RBP12.64□□□□□ -0.39
SMC3-201ENST00000361804 NECTIN1Q15223 517 aa12.64□□□□□ -0.39
SMC3-201ENST00000361804 CCDC171Q6TFL3 1326 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 JAK2O60674 1132 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 EPHA10Q5JZY3 1008 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
SMC3-201ENST00000361804 ZSWIM6Q9HCJ5 1215 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 COL22A1Q8NFW1 1626 aaPredicted RBP12.63□□□□□ -0.39
SMC3-201ENST00000361804 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 PHKG2P15735 406 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 MCM5P33992 734 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 MTX1Q13505 466 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 LARP1Q6PKG0 1096 aaKnown RBP12.63□□□□□ -0.39
SMC3-201ENST00000361804 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 NRBP1Q9UHY1 535 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 NPHP3Q7Z494 1330 aa12.63□□□□□ -0.39
SMC3-201ENST00000361804 SLC27A2O14975 620 aa12.62□□□□□ -0.39
SMC3-201ENST00000361804 HOXB7P09629 217 aa12.62□□□□□ -0.39
SMC3-201ENST00000361804 LRMPQ12912 555 aa12.62□□□□□ -0.39
SMC3-201ENST00000361804 FSD1Q9BTV5 496 aa12.62□□□□□ -0.39
SMC3-201ENST00000361804 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
SMC3-201ENST00000361804 ANKRD36CQ5JPF3 1778 aa12.62□□□□□ -0.39
SMC3-201ENST00000361804 PTGS1P23219 599 aa12.61□□□□□ -0.39
SMC3-201ENST00000361804 VPS53Q5VIR6 699 aa12.61□□□□□ -0.39
SMC3-201ENST00000361804 PHLPP1O60346 1717 aa12.61□□□□□ -0.39
SMC3-201ENST00000361804 CASP7P55210 303 aa12.61□□□□□ -0.39
SMC3-201ENST00000361804 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMC3-201ENST00000361804 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
SMC3-201ENST00000361804 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
SMC3-201ENST00000361804 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
SMC3-201ENST00000361804 DACT1Q9NYF0 836 aa12.61□□□□□ -0.39
SMC3-201ENST00000361804 A0A1B0GUL6 1792 aa12.6□□□□□ -0.39
SMC3-201ENST00000361804 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
SMC3-201ENST00000361804 TERF1P54274 439 aa12.6□□□□□ -0.39
SMC3-201ENST00000361804 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
SMC3-201ENST00000361804 DBF4Q9UBU7 674 aaPredicted RBP12.6□□□□□ -0.39
SMC3-201ENST00000361804 RREB1Q92766 1687 aa12.6□□□□□ -0.39
SMC3-201ENST00000361804 SOS2Q07890 1332 aaPredicted RBP12.6□□□□□ -0.39
SMC3-201ENST00000361804 TTC41PQ6P2S7 1318 aa12.6□□□□□ -0.39
SMC3-201ENST00000361804 ERCC4Q92889 916 aaPredicted RBP12.6□□□□□ -0.39
SMC3-201ENST00000361804 ZKSCAN1P17029 563 aaPredicted RBP12.6□□□□□ -0.39
SMC3-201ENST00000361804 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
SMC3-201ENST00000361804 FAM184AQ8NB25 1140 aa12.6□□□□□ -0.39
SMC3-201ENST00000361804 MYRIPQ8NFW9 859 aa12.6□□□□□ -0.39
SMC3-201ENST00000361804 AKAP11Q9UKA4 1901 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 GRM8O00222 908 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 G3BP1Q13283 466 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMC3-201ENST00000361804 KSR2Q6VAB6 950 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 EVI5LQ96CN4 794 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 SLC52A2Q9HAB3 445 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 MAP4K1Q92918 833 aa12.59□□□□□ -0.39
SMC3-201ENST00000361804 NR1I2O75469 434 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 CBX1P83916 185 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 UVSSAQ2YD98 709 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.4
SMC3-201ENST00000361804 DNAJC2Q99543 621 aaKnown RBP12.58□□□□□ -0.4
SMC3-201ENST00000361804 ZNF335Q9H4Z2 1342 aaPredicted RBP12.58□□□□□ -0.4
SMC3-201ENST00000361804 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 RFX5P48382 616 aaPredicted RBP12.58□□□□□ -0.4
SMC3-201ENST00000361804 TYRO3Q06418 890 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 HSP90AB4PQ58FF6 505 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 NAA30Q147X3 362 aaPredicted RBP12.58□□□□□ -0.4
SMC3-201ENST00000361804 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 NBPF14Q5TI25 921 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
SMC3-201ENST00000361804 BLOC1S2Q6QNY1 142 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 NUP98P52948 1817 aa12.58□□□□□ -0.4
SMC3-201ENST00000361804 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 PTCD1O75127 700 aaKnown RBP12.57□□□□□ -0.4
SMC3-201ENST00000361804 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 MYH15Q9Y2K3 1946 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms