RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 PLEKHH1Q9ULM0 1364 aa21.52■■□□□ 1.03
CLIP2-202ENST00000361545 FSIP1Q8NA03 581 aa21.51■■□□□ 1.03
CLIP2-202ENST00000361545 VEZTQ9HBM0 779 aa21.51■■□□□ 1.03
CLIP2-202ENST00000361545 PARD3Q8TEW0 1356 aa21.51■■□□□ 1.03
CLIP2-202ENST00000361545 IDEP14735 1019 aa21.51■■□□□ 1.03
CLIP2-202ENST00000361545 KIAA1328Q86T90 577 aa21.51■■□□□ 1.03
CLIP2-202ENST00000361545 TRAPPC3LQ5T215 181 aa21.5■■□□□ 1.03
CLIP2-202ENST00000361545 ANO10Q9NW15 660 aa21.5■■□□□ 1.03
CLIP2-202ENST00000361545 TCP11L1Q9NUJ3 509 aa21.5■■□□□ 1.03
CLIP2-202ENST00000361545 NECAB1Q8N987 351 aa21.5■■□□□ 1.03
CLIP2-202ENST00000361545 STX6O43752 255 aa21.5■■□□□ 1.03
CLIP2-202ENST00000361545 ERLIN2O94905 339 aa21.5■■□□□ 1.03
CLIP2-202ENST00000361545 ENOX2Q16206 610 aaKnown RBP21.49■■□□□ 1.03
CLIP2-202ENST00000361545 MCMDC2Q4G0Z9 681 aa21.49■■□□□ 1.03
CLIP2-202ENST00000361545 ZNF397Q8NF99 534 aaPredicted RBP21.49■■□□□ 1.03
CLIP2-202ENST00000361545 ESR2Q92731 530 aa21.49■■□□□ 1.03
CLIP2-202ENST00000361545 IFIT1BQ5T764 474 aaKnown RBP21.49■■□□□ 1.03
CLIP2-202ENST00000361545 KRT23Q9C075 422 aa21.49■■□□□ 1.03
CLIP2-202ENST00000361545 PAG1Q9NWQ8 432 aa21.49■■□□□ 1.03
CLIP2-202ENST00000361545 CCNL1Q9UK58 526 aaPredicted RBP21.49■■□□□ 1.03
CLIP2-202ENST00000361545 RBM8AQ9Y5S9 174 aaKnown RBP21.49■■□□□ 1.03
CLIP2-202ENST00000361545 FKBP15Q5T1M5 1219 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 NEFHP12036 1026 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 DESP17661 470 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 FAM98CQ17RN3 349 aaKnown RBP21.48■■□□□ 1.03
CLIP2-202ENST00000361545 MIGA1Q8NAN2 632 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 SHANK2Q9UPX8 1470 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 CCDC183Q5T5S1 534 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 BIN1O00499 593 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 ARHGAP29Q52LW3 1261 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 AXDND1Q5T1B0 1012 aaPredicted RBP21.48■■□□□ 1.03
CLIP2-202ENST00000361545 CALML4Q96GE6 196 aa21.48■■□□□ 1.03
CLIP2-202ENST00000361545 EIF2AK4Q9P2K8 1649 aaKnown RBP21.48■■□□□ 1.03
CLIP2-202ENST00000361545 TFCP2Q12800 502 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 ZBTB43O43298 467 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 CACNA2D4Q7Z3S7 1137 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 JDP2Q8WYK2 163 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 FAM89AQ96GI7 184 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 ZFYVE9O95405 1425 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 PKNOX2Q96KN3 472 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 TRIM21P19474 475 aaKnown RBP21.47■■□□□ 1.03
CLIP2-202ENST00000361545 UBA7P41226 1012 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 CCDC112Q8NEF3 446 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 DISP1Q96F81 1524 aa21.47■■□□□ 1.03
CLIP2-202ENST00000361545 MAGEB6P1A0A0J9YX57 407 aa21.46■■□□□ 1.03
CLIP2-202ENST00000361545 POTEJP0CG39 1038 aa21.46■■□□□ 1.03
CLIP2-202ENST00000361545 ZNF790Q6PG37 636 aa21.46■■□□□ 1.03
CLIP2-202ENST00000361545 TNPO1Q92973 898 aaKnown RBP21.46■■□□□ 1.03
CLIP2-202ENST00000361545 NEBLO76041 1014 aa21.46■■□□□ 1.03
CLIP2-202ENST00000361545 BICC1Q9H694 974 aaKnown RBP21.45■■□□□ 1.02
CLIP2-202ENST00000361545 NMIQ13287 307 aaPredicted RBP21.45■■□□□ 1.02
CLIP2-202ENST00000361545 SLAIN2Q9P270 581 aa21.45■■□□□ 1.02
CLIP2-202ENST00000361545 DDX21Q9NR30 783 aaKnown RBP eCLIP21.45■■□□□ 1.02
CLIP2-202ENST00000361545 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
CLIP2-202ENST00000361545 SBNO2Q9Y2G9 1366 aa21.44■■□□□ 1.02
CLIP2-202ENST00000361545 MAGEB6Q8N7X4 407 aa21.44■■□□□ 1.02
CLIP2-202ENST00000361545 ESYT1Q9BSJ8 1104 aa21.44■■□□□ 1.02
CLIP2-202ENST00000361545 TAF4BQ92750 862 aa21.44■■□□□ 1.02
CLIP2-202ENST00000361545 CNNM2Q9H8M5 875 aa21.44■■□□□ 1.02
CLIP2-202ENST00000361545 MCM9Q9NXL9 1143 aa21.44■■□□□ 1.02
CLIP2-202ENST00000361545 CEP85Q6P2H3 762 aa21.44■■□□□ 1.02
CLIP2-202ENST00000361545 HEATR3Q7Z4Q2 680 aa21.43■■□□□ 1.02
CLIP2-202ENST00000361545 CNBD1Q8NA66 436 aa21.43■■□□□ 1.02
CLIP2-202ENST00000361545 RLBP1P12271 317 aa21.43■■□□□ 1.02
CLIP2-202ENST00000361545 SFPQP23246 707 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLIP2-202ENST00000361545 RTN1Q16799 776 aa21.43■■□□□ 1.02
CLIP2-202ENST00000361545 CDCA7Q9BWT1 371 aaPredicted RBP21.43■■□□□ 1.02
CLIP2-202ENST00000361545 KIF20AO95235 890 aa21.43■■□□□ 1.02
CLIP2-202ENST00000361545 PRIM1P49642 420 aaKnown RBP21.43■■□□□ 1.02
CLIP2-202ENST00000361545 ISM2Q6H9L7 571 aa21.43■■□□□ 1.02
CLIP2-202ENST00000361545 LGR6Q9HBX8 967 aa21.43■■□□□ 1.02
CLIP2-202ENST00000361545 HCLS1P14317 486 aaPredicted RBP21.42■■□□□ 1.02
CLIP2-202ENST00000361545 G2E3Q7L622 706 aa21.42■■□□□ 1.02
CLIP2-202ENST00000361545 TCERG1LQ5VWI1 586 aa21.42■■□□□ 1.02
CLIP2-202ENST00000361545 CPLX3Q8WVH0 158 aa21.42■■□□□ 1.02
CLIP2-202ENST00000361545 SPA17Q15506 151 aa21.42■■□□□ 1.02
CLIP2-202ENST00000361545 ECM2O94769 699 aaPredicted RBP21.42■■□□□ 1.02
CLIP2-202ENST00000361545 TMX3Q96JJ7 454 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 ALG1Q9BT22 464 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 ANKRD2Q9GZV1 360 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 CENPHQ9H3R5 247 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 SBNO1A3KN83 1393 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 Q6ZUG5 572 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 TMTC2Q8N394 836 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 AMPD3Q01432 767 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 FGFR1OPO95684 399 aaKnown RBP21.41■■□□□ 1.02
CLIP2-202ENST00000361545 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
CLIP2-202ENST00000361545 NBPF7P0C2Y1 421 aaPredicted RBP21.4■■□□□ 1.02
CLIP2-202ENST00000361545 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
CLIP2-202ENST00000361545 IL13P35225 146 aa21.4■■□□□ 1.02
CLIP2-202ENST00000361545 RNF113AO15541 343 aaKnown RBP21.4■■□□□ 1.02
CLIP2-202ENST00000361545 LDHBP07195 334 aaKnown RBP21.4■■□□□ 1.02
CLIP2-202ENST00000361545 TOP1P11387 765 aaKnown RBP21.4■■□□□ 1.02
CLIP2-202ENST00000361545 EYA3Q99504 573 aa21.4■■□□□ 1.02
CLIP2-202ENST00000361545 STK32BQ9NY57 414 aa21.4■■□□□ 1.02
CLIP2-202ENST00000361545 GOLGA6L10A6NI86 522 aa21.4■■□□□ 1.02
CLIP2-202ENST00000361545 CTAGE5O15320 804 aa21.4■■□□□ 1.02
CLIP2-202ENST00000361545 A1BGP04217 495 aa21.4■■□□□ 1.02
CLIP2-202ENST00000361545 MTIF2P46199 727 aaKnown RBP21.39■■□□□ 1.02
CLIP2-202ENST00000361545 CCDC178Q5BJE1 867 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms