RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 GOLGA6L4A6NEF3 574 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 HS1BP3Q53T59 392 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 TAF7LQ5H9L4 462 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 CCDC183Q5T5S1 534 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 GORABQ5T7V8 394 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 CCDC191Q8NCU4 936 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 DDX54Q8TDD1 881 aaKnown RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 PIP4K2AP48426 406 aaPredicted RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 PTPN12Q05209 780 aaKnown RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 LARP1BQ659C4 914 aaKnown RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 KIF6Q6ZMV9 814 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 USP48Q86UV5 1035 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 TLR7Q9NYK1 1049 aaKnown RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 TMEM63CQ9P1W3 806 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 BRINP3Q76B58 766 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 ZSCAN30Q86W11 494 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 NPHP1O15259 732 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 FIBPO43427 364 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 EPHA10Q5JZY3 1008 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 CARD10Q9BWT7 1032 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 GPR108Q9NPR9 543 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 SNRKQ9NRH2 765 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 STRN4Q9NRL3 753 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 KRT85P78386 507 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 MCMDC2Q4G0Z9 681 aa11.07□□□□□ -0.64
GTF3C2-202ENST00000359541 RGPD5Q99666 1765 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 RPS6KB1P23443 525 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 DBNLQ9UJU6 430 aaKnown RBP11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 CPA1P15085 419 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 CCDC57Q2TAC2 916 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 JARID2Q92833 1246 aaPredicted RBP11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 CCDC39Q9UFE4 941 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 CCDC9Q9Y3X0 531 aaKnown RBP11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 ADCK5Q3MIX3 580 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 HAUS7Q99871 368 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 RBSNQ9H1K0 784 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 AKAP2Q9Y2D5 859 aa11.06□□□□□ -0.64
GTF3C2-202ENST00000359541 NEK1Q96PY6 1258 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 MED23Q9ULK4 1368 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 H7C1W4 665 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 STARD3NLO95772 234 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 HSPA2P54652 639 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 CCDC158Q5M9N0 1113 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 DBNDD2Q9BQY9 259 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 ALDH8A1Q9H2A2 487 aaPredicted RBP11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 ZBTB3Q9H5J0 574 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 SLAIN2Q9P270 581 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 RFX5P48382 616 aaPredicted RBP11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 CNPY2Q9Y2B0 182 aa11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 RPAP1Q9BWH6 1393 aaPredicted RBP11.05□□□□□ -0.64
GTF3C2-202ENST00000359541 CRYBG1Q9Y4K1 1723 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 H3BQV1 296 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 EYA2O00167 538 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 UVSSAQ2YD98 709 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 TSGA10IPQ3SY00 556 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 TAF5LO75529 589 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 ME3Q16798 604 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 LRP10Q7Z4F1 713 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 RNF214Q8ND24 703 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
GTF3C2-202ENST00000359541 HSP90AB3PQ58FF7 597 aa11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 SCAND2PQ9GZW5 306 aaPredicted RBP11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 CIAO1O76071 339 aa11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 NECAB1Q8N987 351 aa11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 PKD1L3Q7Z443 1732 aa11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 MTMR6Q9Y217 621 aa11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 C5P01031 1676 aa11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 SOS2Q07890 1332 aaPredicted RBP11.03□□□□□ -0.64
GTF3C2-202ENST00000359541 GOLIM4O00461 696 aa11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 A1BGP04217 495 aa11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 MCM5P33992 734 aa11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 TTC39AQ5SRH9 613 aa11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 TTLL7Q6ZT98 887 aa11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 CHAMP1Q96JM3 812 aa11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 TPCN1Q9ULQ1 816 aa11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 PARP4Q9UKK3 1724 aaKnown RBP11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 COL18A1P39060 1754 aa11.02□□□□□ -0.64
GTF3C2-202ENST00000359541 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
GTF3C2-202ENST00000359541 CTNNA3Q9UI47 895 aa11.02□□□□□ -0.65
GTF3C2-202ENST00000359541 NBPF26B4DH59 902 aa11.02□□□□□ -0.65
GTF3C2-202ENST00000359541 LARGE1O95461 756 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms