RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 SKILP12757 684 aa16.93■□□□□ 0.3
APP-205ENST00000358918 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
APP-205ENST00000358918 LEO1Q8WVC0 666 aaPredicted RBP16.93■□□□□ 0.3
APP-205ENST00000358918 MRFAP1L1Q96HT8 127 aa16.93■□□□□ 0.3
APP-205ENST00000358918 USP44Q9H0E7 712 aa16.93■□□□□ 0.3
APP-205ENST00000358918 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
APP-205ENST00000358918 VGLL3A8MV65 326 aa16.93■□□□□ 0.3
APP-205ENST00000358918 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
APP-205ENST00000358918 IPO4Q8TEX9 1081 aaKnown RBP16.93■□□□□ 0.3
APP-205ENST00000358918 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
APP-205ENST00000358918 ATF3P18847 181 aa16.92■□□□□ 0.3
APP-205ENST00000358918 PTH1RQ03431 593 aa16.92■□□□□ 0.3
APP-205ENST00000358918 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
APP-205ENST00000358918 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
APP-205ENST00000358918 KCNB2Q92953 911 aa16.92■□□□□ 0.3
APP-205ENST00000358918 TFIP11Q9UBB9 837 aaKnown RBP16.92■□□□□ 0.3
APP-205ENST00000358918 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
APP-205ENST00000358918 KIF2AO00139 706 aaPredicted RBP16.92■□□□□ 0.3
APP-205ENST00000358918 NR1I2O75469 434 aa16.92■□□□□ 0.3
APP-205ENST00000358918 SLC20A2Q08357 652 aa16.92■□□□□ 0.3
APP-205ENST00000358918 POLA2Q14181 598 aa16.92■□□□□ 0.3
APP-205ENST00000358918 NOL10Q9BSC4 688 aaKnown RBP16.92■□□□□ 0.3
APP-205ENST00000358918 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
APP-205ENST00000358918 BMS1Q14692 1282 aaKnown RBP16.91■□□□□ 0.3
APP-205ENST00000358918 PXDNLA1KZ92 1463 aa16.91■□□□□ 0.3
APP-205ENST00000358918 ARID5BQ14865 1188 aa16.91■□□□□ 0.3
APP-205ENST00000358918 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
APP-205ENST00000358918 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
APP-205ENST00000358918 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
APP-205ENST00000358918 CCAR2Q8N163 923 aaKnown RBP16.9■□□□□ 0.3
APP-205ENST00000358918 TRMT1Q9NXH9 659 aaKnown RBP16.9■□□□□ 0.3
APP-205ENST00000358918 TTC41PQ6P2S7 1318 aa16.9■□□□□ 0.3
APP-205ENST00000358918 LRRC37A3O60309 1634 aa16.89■□□□□ 0.3
APP-205ENST00000358918 IQCB1Q15051 598 aa16.89■□□□□ 0.3
APP-205ENST00000358918 DDX54Q8TDD1 881 aaKnown RBP16.89■□□□□ 0.3
APP-205ENST00000358918 ST7Q9NRC1 585 aa16.89■□□□□ 0.3
APP-205ENST00000358918 USP42Q9H9J4 1324 aaKnown RBP16.89■□□□□ 0.29
APP-205ENST00000358918 RGPD2P0DJD1 1756 aa16.89■□□□□ 0.29
APP-205ENST00000358918 SLIT3O75094 1523 aa16.89■□□□□ 0.29
APP-205ENST00000358918 PSMA5P28066 241 aa16.89■□□□□ 0.29
APP-205ENST00000358918 ANKRD24Q8TF21 1146 aa16.89■□□□□ 0.29
APP-205ENST00000358918 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
APP-205ENST00000358918 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
APP-205ENST00000358918 TULP2O00295 520 aa16.88■□□□□ 0.29
APP-205ENST00000358918 SRGAP3O43295 1099 aa16.88■□□□□ 0.29
APP-205ENST00000358918 ZC3H6P61129 1189 aaKnown RBP16.88■□□□□ 0.29
APP-205ENST00000358918 CCZ1BP86790 482 aa16.88■□□□□ 0.29
APP-205ENST00000358918 CCZ1P86791 482 aaPredicted RBP16.88■□□□□ 0.29
APP-205ENST00000358918 NECTIN1Q15223 517 aa16.88■□□□□ 0.29
APP-205ENST00000358918 ANKRD1Q15327 319 aa16.88■□□□□ 0.29
APP-205ENST00000358918 HSP90AB4PQ58FF6 505 aa16.88■□□□□ 0.29
APP-205ENST00000358918 TRPM3Q9HCF6 1732 aaPredicted RBP16.88■□□□□ 0.29
APP-205ENST00000358918 KCND1Q9NSA2 647 aa16.88■□□□□ 0.29
APP-205ENST00000358918 ERBB3P21860 1342 aa16.88■□□□□ 0.29
APP-205ENST00000358918 STRCP1A6NGW2 1772 aa16.88■□□□□ 0.29
APP-205ENST00000358918 LARP1Q6PKG0 1096 aaKnown RBP16.88■□□□□ 0.29
APP-205ENST00000358918 PGBD1Q96JS3 809 aa16.88■□□□□ 0.29
APP-205ENST00000358918 TSPYL1Q9H0U9 437 aa16.88■□□□□ 0.29
APP-205ENST00000358918 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
APP-205ENST00000358918 MST1RQ04912 1400 aa16.87■□□□□ 0.29
APP-205ENST00000358918 BECN2A8MW95 431 aa16.87■□□□□ 0.29
APP-205ENST00000358918 CYP2C19P33261 490 aa16.87■□□□□ 0.29
APP-205ENST00000358918 STX1AQ16623 288 aa16.87■□□□□ 0.29
APP-205ENST00000358918 CREB3L3Q68CJ9 461 aa16.87■□□□□ 0.29
APP-205ENST00000358918 FILIP1Q7Z7B0 1213 aa16.87■□□□□ 0.29
APP-205ENST00000358918 RBM8AQ9Y5S9 174 aaKnown RBP16.87■□□□□ 0.29
APP-205ENST00000358918 KIF1AQ12756 1690 aa16.87■□□□□ 0.29
APP-205ENST00000358918 H2AFXP16104 143 aaPredicted RBP16.87■□□□□ 0.29
APP-205ENST00000358918 NPHP1O15259 732 aa16.86■□□□□ 0.29
APP-205ENST00000358918 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
APP-205ENST00000358918 ZNF530Q6P9A1 599 aaPredicted RBP16.86■□□□□ 0.29
APP-205ENST00000358918 C11orf57Q6ZUT1 292 aaPredicted RBP16.86■□□□□ 0.29
APP-205ENST00000358918 USP16Q9Y5T5 823 aa16.86■□□□□ 0.29
APP-205ENST00000358918 PHRF1Q9P1Y6 1649 aaKnown RBP16.86■□□□□ 0.29
APP-205ENST00000358918 FAM208AQ9UK61 1670 aaKnown RBP16.86■□□□□ 0.29
APP-205ENST00000358918 GSDMDP57764 484 aa16.86■□□□□ 0.29
APP-205ENST00000358918 CRYBG1Q9Y4K1 1723 aa16.86■□□□□ 0.29
APP-205ENST00000358918 CTAGE5O15320 804 aa16.85■□□□□ 0.29
APP-205ENST00000358918 GIGYF1O75420 1035 aaPredicted RBP16.85■□□□□ 0.29
APP-205ENST00000358918 SNW1Q13573 536 aaKnown RBP16.85■□□□□ 0.29
APP-205ENST00000358918 BLOC1S2Q6QNY1 142 aa16.85■□□□□ 0.29
APP-205ENST00000358918 GPATCH3Q96I76 525 aa16.85■□□□□ 0.29
APP-205ENST00000358918 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
APP-205ENST00000358918 GTF3C6Q969F1 213 aa16.85■□□□□ 0.29
APP-205ENST00000358918 MPRIPQ6WCQ1 1025 aa16.84■□□□□ 0.29
APP-205ENST00000358918 L2HGDHQ9H9P8 463 aa16.84■□□□□ 0.29
APP-205ENST00000358918 BABAM1Q9NWV8 329 aa16.84■□□□□ 0.29
APP-205ENST00000358918 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
APP-205ENST00000358918 CAPN2P17655 700 aa16.84■□□□□ 0.29
APP-205ENST00000358918 ERCC6LQ2NKX8 1250 aa16.84■□□□□ 0.29
APP-205ENST00000358918 ECHDC1Q9NTX5 307 aa16.84■□□□□ 0.29
APP-205ENST00000358918 CFAP45Q9UL16 551 aa16.84■□□□□ 0.29
APP-205ENST00000358918 FHOD1Q9Y613 1164 aa16.84■□□□□ 0.29
APP-205ENST00000358918 SLC27A2O14975 620 aa16.83■□□□□ 0.28
APP-205ENST00000358918 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
APP-205ENST00000358918 TEX35Q5T0J7 233 aa16.83■□□□□ 0.28
APP-205ENST00000358918 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
APP-205ENST00000358918 CLASRPQ8N2M8 674 aaKnown RBP16.83■□□□□ 0.28
APP-205ENST00000358918 EVI5LQ96CN4 794 aa16.83■□□□□ 0.28
APP-205ENST00000358918 HNRNPH2P55795 449 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms