RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 MNS1Q8NEH6 495 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 PI4K2BQ8TCG2 481 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 HMG20BQ9P0W2 317 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 CPS1P31327 1500 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 SERPINC1P01008 464 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 PDIA4P13667 645 aaKnown RBP8.01□□□□□ -1.13
RTN4-203ENST00000357376 CHRNA2Q15822 529 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 CCDC57Q2TAC2 916 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 RRP12Q5JTH9 1297 aaKnown RBP8.01□□□□□ -1.13
RTN4-203ENST00000357376 LMBR1LQ6UX01 489 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 TTC6Q86TZ1 520 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 TLR7Q9NYK1 1049 aaKnown RBP8.01□□□□□ -1.13
RTN4-203ENST00000357376 EVA1CP58658 441 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 APOBRQ0VD83 1088 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 PDLIM2Q96JY6 352 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 PIK3C2BO00750 1634 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 PES1O00541 588 aaKnown RBP8.01□□□□□ -1.13
RTN4-203ENST00000357376 DHX16O60231 1041 aaKnown RBP8.01□□□□□ -1.13
RTN4-203ENST00000357376 GCP02774 474 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 RPS6KB1P23443 525 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 MYRIPQ8NFW9 859 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 SIRT1Q96EB6 747 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 ANO10Q9NW15 660 aa8.01□□□□□ -1.13
RTN4-203ENST00000357376 AK9Q5TCS8 1911 aa8□□□□□ -1.13
RTN4-203ENST00000357376 HSP90AB3PQ58FF7 597 aa8□□□□□ -1.13
RTN4-203ENST00000357376 ERCC4Q92889 916 aaPredicted RBP8□□□□□ -1.13
RTN4-203ENST00000357376 C8orf76Q96K31 380 aa8□□□□□ -1.13
RTN4-203ENST00000357376 PPLO60437 1756 aa8□□□□□ -1.13
RTN4-203ENST00000357376 RIOK3O14730 519 aaKnown RBP8□□□□□ -1.13
RTN4-203ENST00000357376 LRMPQ12912 555 aa8□□□□□ -1.13
RTN4-203ENST00000357376 RASSF8Q8NHQ8 419 aa8□□□□□ -1.13
RTN4-203ENST00000357376 DBNDD2Q9BQY9 259 aa8□□□□□ -1.13
RTN4-203ENST00000357376 CBX8Q9HC52 389 aa8□□□□□ -1.13
RTN4-203ENST00000357376 NCOA5Q9HCD5 579 aaKnown RBP8□□□□□ -1.13
RTN4-203ENST00000357376 STRN4Q9NRL3 753 aa8□□□□□ -1.13
RTN4-203ENST00000357376 TBX22Q9Y458 520 aa8□□□□□ -1.13
RTN4-203ENST00000357376 GOLGA8BA8MQT2 603 aa8□□□□□ -1.13
RTN4-203ENST00000357376 IDH1O75874 414 aaKnown RBP8□□□□□ -1.13
RTN4-203ENST00000357376 TERF1P54274 439 aa8□□□□□ -1.13
RTN4-203ENST00000357376 STX1AQ16623 288 aa8□□□□□ -1.13
RTN4-203ENST00000357376 MCMDC2Q4G0Z9 681 aa8□□□□□ -1.13
RTN4-203ENST00000357376 LEO1Q8WVC0 666 aaPredicted RBP8□□□□□ -1.13
RTN4-203ENST00000357376 SEC62Q99442 399 aaKnown RBP8□□□□□ -1.13
RTN4-203ENST00000357376 PYCARDQ9ULZ3 195 aa8□□□□□ -1.13
RTN4-203ENST00000357376 IMMTQ16891 758 aaKnown RBP7.99□□□□□ -1.13
RTN4-203ENST00000357376 OLFM4Q6UX06 510 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 TOM1L2Q6ZVM7 507 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 ZSWIM6Q9HCJ5 1215 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 DDX21Q9NR30 783 aaKnown RBP eCLIP7.99□□□□□ -1.134e-6■■■■□ 21
RTN4-203ENST00000357376 CNNM1Q9NRU3 951 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 SKILP12757 684 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 TIMM10P62072 90 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 AKAP17AQ02040 695 aaKnown RBP7.99□□□□□ -1.13
RTN4-203ENST00000357376 KRT28Q7Z3Y7 464 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 CCDC144CPQ8IYA2 1237 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 CCDC82Q8N4S0 544 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 AOPEPQ8N6M6 819 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 BABAM1Q9NWV8 329 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 FRMPD1Q5SYB0 1578 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 ARHGEF28Q8N1W1 1705 aaKnown RBP7.99□□□□□ -1.13
RTN4-203ENST00000357376 PTPDC1A2A3K4 754 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 GIGYF1O75420 1035 aaPredicted RBP7.99□□□□□ -1.13
RTN4-203ENST00000357376 HMGB1P09429 215 aaKnown RBP7.99□□□□□ -1.13
RTN4-203ENST00000357376 SFPQP23246 707 aaKnown RBP eCLIP7.99□□□□□ -1.132e-6■■■□□ 15.5
RTN4-203ENST00000357376 CRB1P82279 1406 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 ORAI2Q96SN7 254 aa7.99□□□□□ -1.13
RTN4-203ENST00000357376 CCDC94Q9BW85 323 aaPredicted RBP7.99□□□□□ -1.13
RTN4-203ENST00000357376 ZSCAN16Q9H4T2 348 aaPredicted RBP7.99□□□□□ -1.13
RTN4-203ENST00000357376 NEURL4Q96JN8 1562 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 NR1I2O75469 434 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 SAFBQ15424 915 aaKnown RBP eCLIP7.98□□□□□ -1.131e-6■■□□□ 14.5
RTN4-203ENST00000357376 CFAP100Q494V2 611 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 CEP135Q66GS9 1140 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 TMC6Q7Z403 805 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 CCDC34Q96HJ3 373 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 HOXB7P09629 217 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 SNRPA1P09661 255 aaKnown RBP7.98□□□□□ -1.13
RTN4-203ENST00000357376 HSP90AA4PQ58FG1 418 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 TTLL5Q6EMB2 1281 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 ZNF589Q86UQ0 364 aaPredicted RBP7.98□□□□□ -1.13
RTN4-203ENST00000357376 ORC3Q9UBD5 711 aaPredicted RBP7.98□□□□□ -1.13
RTN4-203ENST00000357376 USP16Q9Y5T5 823 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 DIP2CQ9Y2E4 1556 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 A0A087WWV3 80 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 OTUD7BQ6GQQ9 843 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 TM6SF1Q9BZW5 370 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 CTNNA3Q9UI47 895 aa7.98□□□□□ -1.13
RTN4-203ENST00000357376 CTAGE5O15320 804 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 POLA2Q14181 598 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 TNNI3KQ59H18 835 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 ZNF790Q6PG37 636 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 IFNL2Q8IZJ0 200 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 KIF18AQ8NI77 898 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 TMX1Q9H3N1 280 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 BCL2L12Q9HB09 334 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 NRBP1Q9UHY1 535 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 FPGT-TNNI3KV9GXZ4 949 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 USP32Q8NFA0 1604 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 KLF18A0A0U1RQI7 1052 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms