RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ANKRD13DQ6ZTN6 518 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 GAS2L3Q86XJ1 694 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 OGFOD1Q8N543 542 aa14.35□□□□□ -0.11
COLCA1-201ENST00000355430 UTP14AQ9BVJ6 771 aaKnown RBP14.34□□□□□ -0.11
COLCA1-201ENST00000355430 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 LMOD1P29536 600 aaPredicted RBP14.34□□□□□ -0.11
COLCA1-201ENST00000355430 ANO6Q4KMQ2 910 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 HSP90B2PQ58FF3 399 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 PRM3Q9NNZ6 103 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 ABCC4O15439 1325 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 FSIP1Q8NA03 581 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 IMMTQ16891 758 aaKnown RBP14.34□□□□□ -0.11
COLCA1-201ENST00000355430 LDHAL6AQ6ZMR3 332 aa14.34□□□□□ -0.11
COLCA1-201ENST00000355430 EFCAB6Q5THR3 1501 aa14.33□□□□□ -0.11
COLCA1-201ENST00000355430 TRIM22Q8IYM9 498 aa14.33□□□□□ -0.12
COLCA1-201ENST00000355430 FILIP1LQ4L180 1135 aa14.33□□□□□ -0.12
COLCA1-201ENST00000355430 CTAGE5O15320 804 aa14.33□□□□□ -0.12
COLCA1-201ENST00000355430 CPA1P15085 419 aa14.33□□□□□ -0.12
COLCA1-201ENST00000355430 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.12
COLCA1-201ENST00000355430 STX1AQ16623 288 aa14.33□□□□□ -0.12
COLCA1-201ENST00000355430 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
COLCA1-201ENST00000355430 JARID2Q92833 1246 aaPredicted RBP14.32□□□□□ -0.12
COLCA1-201ENST00000355430 ACBD3Q9H3P7 528 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 PA2G4Q9UQ80 394 aaKnown RBP14.32□□□□□ -0.12
COLCA1-201ENST00000355430 ERICH4A6NGS2 130 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 CFAP100Q494V2 611 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 ZHX1Q9UKY1 873 aaPredicted RBP14.32□□□□□ -0.12
COLCA1-201ENST00000355430 CD2BP2O95400 341 aaKnown RBP14.32□□□□□ -0.12
COLCA1-201ENST00000355430 KIF18AQ8NI77 898 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 EYA3Q99504 573 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 CGNQ9P2M7 1197 aaKnown RBP14.32□□□□□ -0.12
COLCA1-201ENST00000355430 ATP5J2-PTCD1G3V325 749 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 HMGB1P09429 215 aaKnown RBP14.32□□□□□ -0.12
COLCA1-201ENST00000355430 SLC39A6Q13433 755 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 FAM200AQ8TCP9 573 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 MKNK2Q9HBH9 465 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 IQGAP3Q86VI3 1631 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 PKP1Q13835 747 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 CDK5RAP3Q96JB5 506 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 DACT1Q9NYF0 836 aa14.32□□□□□ -0.12
COLCA1-201ENST00000355430 CDKL5O76039 1030 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 BAG3O95817 575 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
COLCA1-201ENST00000355430 CCDC186Q7Z3E2 898 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 C8orf76Q96K31 380 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 MYOM2P54296 1465 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 SOS1Q07889 1333 aaPredicted RBP14.31□□□□□ -0.12
COLCA1-201ENST00000355430 NFATC2IPQ8NCF5 419 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 FLAD1Q8NFF5 587 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 SMARCE1Q969G3 411 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 DACH1Q9UI36 760 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 HECW2Q9P2P5 1572 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 GSTO1P78417 241 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 PPFIBP1Q86W92 1011 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 CHL1O00533 1208 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 SYT1P21579 422 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 NUP133Q8WUM0 1156 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 DDX17Q92841 729 aaKnown RBP14.31□□□□□ -0.12
COLCA1-201ENST00000355430 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
COLCA1-201ENST00000355430 HMG20BQ9P0W2 317 aa14.31□□□□□ -0.12
COLCA1-201ENST00000355430 EDC4Q6P2E9 1401 aaKnown RBP14.31□□□□□ -0.12
COLCA1-201ENST00000355430 CAGE1Q8TC20 777 aa14.3□□□□□ -0.12
COLCA1-201ENST00000355430 LRRC2Q9BYS8 371 aa14.3□□□□□ -0.12
COLCA1-201ENST00000355430 TMEM63CQ9P1W3 806 aa14.3□□□□□ -0.12
COLCA1-201ENST00000355430 GADD45BO75293 160 aaPredicted RBP14.3□□□□□ -0.12
COLCA1-201ENST00000355430 BIN1O00499 593 aa14.3□□□□□ -0.12
COLCA1-201ENST00000355430 EYA1Q99502 592 aa14.3□□□□□ -0.12
COLCA1-201ENST00000355430 KIF2AO00139 706 aaPredicted RBP14.3□□□□□ -0.12
COLCA1-201ENST00000355430 GOLIM4O00461 696 aa14.3□□□□□ -0.12
COLCA1-201ENST00000355430 HLA-DOAP06340 250 aa14.3□□□□□ -0.12
COLCA1-201ENST00000355430 WDR78Q5VTH9 848 aa14.3□□□□□ -0.12
COLCA1-201ENST00000355430 CEP135Q66GS9 1140 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 UBE3BQ7Z3V4 1068 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 UBXN4Q92575 508 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 CCDC87Q9NVE4 849 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 RBM17Q96I25 401 aaKnown RBP14.29□□□□□ -0.12
COLCA1-201ENST00000355430 DNAJC25Q9H1X3 360 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 CABP5Q9NP86 173 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 TYRO3Q06418 890 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 BRF1Q92994 677 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 PNMA6EA0A0J9YXQ4 647 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 NEMFO60524 1076 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 TMC6Q7Z403 805 aa14.29□□□□□ -0.12
COLCA1-201ENST00000355430 TTF1Q15361 905 aaPredicted RBP14.28□□□□□ -0.12
COLCA1-201ENST00000355430 XAGE3Q8WTP9 111 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 MAP3K19Q56UN5 1328 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 ZNF335Q9H4Z2 1342 aaPredicted RBP14.28□□□□□ -0.12
COLCA1-201ENST00000355430 SHROOM2Q13796 1616 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 MAP3K5Q99683 1374 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 TXLNAP40222 546 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 NAP1L1P55209 391 aaKnown RBP14.28□□□□□ -0.12
COLCA1-201ENST00000355430 ZNF804AQ7Z570 1209 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 FEZ1Q99689 392 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 ZC3H12CQ9C0D7 883 aaKnown RBP14.28□□□□□ -0.12
COLCA1-201ENST00000355430 CWC15Q9P013 229 aaKnown RBP14.28□□□□□ -0.12
COLCA1-201ENST00000355430 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 PTGS1P23219 599 aa14.28□□□□□ -0.12
COLCA1-201ENST00000355430 CREB3L3Q68CJ9 461 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms