RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 DDX58O95786 925 aaKnown RBP17.21■□□□□ 0.35
GFRA1-201ENST00000355422 IGKV5-2P06315 115 aa17.21■□□□□ 0.35
GFRA1-201ENST00000355422 CHAF1AQ13111 956 aaPredicted RBP17.21■□□□□ 0.35
GFRA1-201ENST00000355422 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
GFRA1-201ENST00000355422 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.35
GFRA1-201ENST00000355422 JAK2O60674 1132 aa17.21■□□□□ 0.35
GFRA1-201ENST00000355422 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
GFRA1-201ENST00000355422 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
GFRA1-201ENST00000355422 NR1I2O75469 434 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 TAF5LO75529 589 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 RIC3Q7Z5B4 369 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 PGBD1Q96JS3 809 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
GFRA1-201ENST00000355422 DDX19AQ9NUU7 478 aaKnown RBP17.2■□□□□ 0.34
GFRA1-201ENST00000355422 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 PDIA6Q15084 440 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 TSGA10IPQ3SY00 556 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 HMG20BQ9P0W2 317 aa17.2■□□□□ 0.34
GFRA1-201ENST00000355422 LRMPQ12912 555 aa17.19■□□□□ 0.34
GFRA1-201ENST00000355422 ESCO1Q5FWF5 840 aa17.19■□□□□ 0.34
GFRA1-201ENST00000355422 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
GFRA1-201ENST00000355422 BICD2Q8TD16 824 aa17.19■□□□□ 0.34
GFRA1-201ENST00000355422 PPP4R3BQ5MIZ7 849 aa17.19■□□□□ 0.34
GFRA1-201ENST00000355422 RBM43Q6ZSC3 357 aaKnown RBP17.19■□□□□ 0.34
GFRA1-201ENST00000355422 DDX11Q96FC9 970 aa17.19■□□□□ 0.34
GFRA1-201ENST00000355422 TRIM5Q9C035 493 aa17.19■□□□□ 0.34
GFRA1-201ENST00000355422 NDUFB9Q9Y6M9 179 aa17.19■□□□□ 0.34
GFRA1-201ENST00000355422 ADGRL3Q9HAR2 1447 aa17.18■□□□□ 0.34
GFRA1-201ENST00000355422 COL15A1P39059 1388 aa17.18■□□□□ 0.34
GFRA1-201ENST00000355422 CHGBP05060 677 aa17.18■□□□□ 0.34
GFRA1-201ENST00000355422 ZNF75DP51815 510 aa17.18■□□□□ 0.34
GFRA1-201ENST00000355422 BRF1Q92994 677 aa17.18■□□□□ 0.34
GFRA1-201ENST00000355422 GTF3C6Q969F1 213 aa17.18■□□□□ 0.34
GFRA1-201ENST00000355422 DNAJC25Q9H1X3 360 aa17.18■□□□□ 0.34
GFRA1-201ENST00000355422 JCADQ9P266 1359 aa17.18■□□□□ 0.34
GFRA1-201ENST00000355422 MYL6BP14649 208 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 PLA2G4DQ86XP0 818 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 NEK1Q96PY6 1258 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 ZNF165P49910 485 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 CBX1P83916 185 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 RESTQ13127 1097 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 TDRD7Q8NHU6 1098 aaKnown RBP17.17■□□□□ 0.34
GFRA1-201ENST00000355422 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
GFRA1-201ENST00000355422 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
GFRA1-201ENST00000355422 GCP02774 474 aa17.16■□□□□ 0.34
GFRA1-201ENST00000355422 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
GFRA1-201ENST00000355422 ATP2B3Q16720 1220 aa17.16■□□□□ 0.34
GFRA1-201ENST00000355422 Q6ZUG5 572 aa17.16■□□□□ 0.34
GFRA1-201ENST00000355422 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
GFRA1-201ENST00000355422 KRT32Q14532 448 aa17.16■□□□□ 0.34
GFRA1-201ENST00000355422 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
GFRA1-201ENST00000355422 DBNLQ9UJU6 430 aaKnown RBP17.16■□□□□ 0.34
GFRA1-201ENST00000355422 NEXNQ0ZGT2 675 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 GCKRQ14397 625 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 PDCL2Q8N4E4 241 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 MYD88Q99836 296 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 H3BQV1 296 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 ZSCAN25Q6NSZ9 544 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 LRRC2Q9BYS8 371 aa17.15■□□□□ 0.34
GFRA1-201ENST00000355422 CTIFO43310 598 aaKnown RBP17.14■□□□□ 0.33
GFRA1-201ENST00000355422 ATP5JP18859 108 aa17.14■□□□□ 0.33
GFRA1-201ENST00000355422 CEBPZQ03701 1054 aaKnown RBP17.14■□□□□ 0.33
GFRA1-201ENST00000355422 TFCP2Q12800 502 aa17.14■□□□□ 0.33
GFRA1-201ENST00000355422 C16orf45Q96MC5 204 aaPredicted RBP17.14■□□□□ 0.33
GFRA1-201ENST00000355422 COPS6Q7L5N1 327 aa17.14■□□□□ 0.33
GFRA1-201ENST00000355422 OVOS2A0A0G2JMS6 1433 aa17.14■□□□□ 0.33
GFRA1-201ENST00000355422 CYP21A2P08686 494 aa17.13■□□□□ 0.33
GFRA1-201ENST00000355422 TNNI3KQ59H18 835 aa17.13■□□□□ 0.33
GFRA1-201ENST00000355422 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
GFRA1-201ENST00000355422 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.13■□□□□ 0.33
GFRA1-201ENST00000355422 DNAJC2Q99543 621 aaKnown RBP17.13■□□□□ 0.33
GFRA1-201ENST00000355422 CLIP2Q9UDT6 1046 aa17.13■□□□□ 0.33
GFRA1-201ENST00000355422 AXIN2Q9Y2T1 843 aa17.13■□□□□ 0.33
GFRA1-201ENST00000355422 FPGT-TNNI3KV9GXZ4 949 aa17.13■□□□□ 0.33
GFRA1-201ENST00000355422 SCRN1Q12765 414 aa17.13■□□□□ 0.33
GFRA1-201ENST00000355422 ANKRD7Q92527 254 aa17.13■□□□□ 0.33
GFRA1-201ENST00000355422 FOSBP53539 338 aa17.12■□□□□ 0.33
GFRA1-201ENST00000355422 CCDC144BQ3MJ40 725 aa17.12■□□□□ 0.33
GFRA1-201ENST00000355422 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
GFRA1-201ENST00000355422 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
GFRA1-201ENST00000355422 METTL22Q9BUU2 404 aaPredicted RBP17.12■□□□□ 0.33
GFRA1-201ENST00000355422 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
GFRA1-201ENST00000355422 ZNF609O15014 1411 aa17.12■□□□□ 0.33
GFRA1-201ENST00000355422 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
GFRA1-201ENST00000355422 PTPN12Q05209 780 aaKnown RBP17.12■□□□□ 0.33
GFRA1-201ENST00000355422 CACTINQ8WUQ7 758 aaKnown RBP17.12■□□□□ 0.33
GFRA1-201ENST00000355422 ZSCAN16Q9H4T2 348 aaPredicted RBP17.12■□□□□ 0.33
GFRA1-201ENST00000355422 CFAP45Q9UL16 551 aa17.12■□□□□ 0.33
GFRA1-201ENST00000355422 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
GFRA1-201ENST00000355422 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
GFRA1-201ENST00000355422 RFX5P48382 616 aaPredicted RBP17.11■□□□□ 0.33
GFRA1-201ENST00000355422 U3KPZ7 1027 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms