RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 CNTROBQ8N137 903 aa13.28□□□□□ -0.28
NEIL1-201ENST00000355059 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
NEIL1-201ENST00000355059 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
NEIL1-201ENST00000355059 SPATA31A6Q5VVP1 1343 aa13.28□□□□□ -0.28
NEIL1-201ENST00000355059 TIMM10P62072 90 aa13.27□□□□□ -0.28
NEIL1-201ENST00000355059 HLFQ16534 295 aa13.27□□□□□ -0.28
NEIL1-201ENST00000355059 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.27□□□□□ -0.28
NEIL1-201ENST00000355059 ATP6V1DQ9Y5K8 247 aa13.27□□□□□ -0.28
NEIL1-201ENST00000355059 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.28
NEIL1-201ENST00000355059 BEND3Q5T5X7 828 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 USP26Q9BXU7 913 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 PXDNQ92626 1479 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 NBPF26B4DH59 902 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 C6orf229H3BNL8 230 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 PDE1AP54750 535 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 NBPF14Q5TI25 921 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
NEIL1-201ENST00000355059 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.29
NEIL1-201ENST00000355059 COL3A1P02461 1466 aaPredicted RBP13.26□□□□□ -0.29
NEIL1-201ENST00000355059 ZKSCAN1P17029 563 aaPredicted RBP13.26□□□□□ -0.29
NEIL1-201ENST00000355059 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 CPDO75976 1380 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
NEIL1-201ENST00000355059 TMX3Q96JJ7 454 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 KCNG1Q9UIX4 513 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 TPM2P07951 284 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 CSPP1Q1MSJ5 1256 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 CHAMP1Q96JM3 812 aa13.26□□□□□ -0.29
NEIL1-201ENST00000355059 ABCC4O15439 1325 aa13.25□□□□□ -0.29
NEIL1-201ENST00000355059 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
NEIL1-201ENST00000355059 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.25□□□□□ -0.29
NEIL1-201ENST00000355059 FSD2A1L4K1 749 aa13.25□□□□□ -0.29
NEIL1-201ENST00000355059 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
NEIL1-201ENST00000355059 DDX46Q7L014 1031 aaKnown RBP13.25□□□□□ -0.29
NEIL1-201ENST00000355059 PKP1Q13835 747 aa13.25□□□□□ -0.29
NEIL1-201ENST00000355059 TPTE2Q6XPS3 522 aa13.25□□□□□ -0.29
NEIL1-201ENST00000355059 MTMR7Q9Y216 660 aa13.25□□□□□ -0.29
NEIL1-201ENST00000355059 TFCP2Q12800 502 aa13.25□□□□□ -0.29
NEIL1-201ENST00000355059 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
NEIL1-201ENST00000355059 TAF5LO75529 589 aa13.24□□□□□ -0.29
NEIL1-201ENST00000355059 IFIT1P09914 478 aaKnown RBP13.24□□□□□ -0.29
NEIL1-201ENST00000355059 WDR33Q9C0J8 1336 aaKnown RBP13.24□□□□□ -0.29
NEIL1-201ENST00000355059 GOLIM4O00461 696 aa13.24□□□□□ -0.29
NEIL1-201ENST00000355059 RAD21O60216 631 aa13.24□□□□□ -0.29
NEIL1-201ENST00000355059 KDM4AO75164 1064 aa13.24□□□□□ -0.29
NEIL1-201ENST00000355059 CNPY4Q8N129 248 aa13.24□□□□□ -0.29
NEIL1-201ENST00000355059 FMN2Q9NZ56 1722 aa13.24□□□□□ -0.29
NEIL1-201ENST00000355059 FOSBP53539 338 aa13.24□□□□□ -0.29
NEIL1-201ENST00000355059 CAMTA1Q9Y6Y1 1673 aa13.23□□□□□ -0.29
NEIL1-201ENST00000355059 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-201ENST00000355059 ITGA6P23229 1130 aa13.23□□□□□ -0.29
NEIL1-201ENST00000355059 CCDC191Q8NCU4 936 aa13.23□□□□□ -0.29
NEIL1-201ENST00000355059 NSFL1CQ9UNZ2 370 aaKnown RBP13.23□□□□□ -0.29
NEIL1-201ENST00000355059 EN1Q05925 392 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-201ENST00000355059 CCDC152Q4G0S7 254 aa13.23□□□□□ -0.29
NEIL1-201ENST00000355059 RAI14Q9P0K7 980 aa13.23□□□□□ -0.29
NEIL1-201ENST00000355059 LRP2BPQ9P2M1 347 aa13.23□□□□□ -0.29
NEIL1-201ENST00000355059 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.23□□□□□ -0.29
NEIL1-201ENST00000355059 USP32Q8NFA0 1604 aa13.22□□□□□ -0.29
NEIL1-201ENST00000355059 SLC4A8Q2Y0W8 1093 aa13.22□□□□□ -0.29
NEIL1-201ENST00000355059 CNBD1Q8NA66 436 aa13.22□□□□□ -0.29
NEIL1-201ENST00000355059 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
NEIL1-201ENST00000355059 IGKV5-2P06315 115 aa13.22□□□□□ -0.29
NEIL1-201ENST00000355059 PPP4R3BQ5MIZ7 849 aa13.22□□□□□ -0.29
NEIL1-201ENST00000355059 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
NEIL1-201ENST00000355059 STK32BQ9NY57 414 aa13.22□□□□□ -0.29
NEIL1-201ENST00000355059 MAP3K15Q6ZN16 1313 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 DTNBO60941 627 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 BAG6P46379 1132 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 CDC5LQ99459 802 aaKnown RBP13.21□□□□□ -0.29
NEIL1-201ENST00000355059 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 ADGRB2O60241 1585 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 KNDC1Q76NI1 1749 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 UQCRHLA0A096LP55 91 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 UQCRHP07919 91 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
NEIL1-201ENST00000355059 ITPK1Q13572 414 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 SPC24Q8NBT2 197 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 NRKQ7Z2Y5 1582 aa13.21□□□□□ -0.29
NEIL1-201ENST00000355059 SOS1Q07889 1333 aaPredicted RBP13.21□□□□□ -0.3
NEIL1-201ENST00000355059 PIK3C2AO00443 1686 aa13.21□□□□□ -0.3
NEIL1-201ENST00000355059 H3BQV1 296 aa13.21□□□□□ -0.3
NEIL1-201ENST00000355059 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.3
NEIL1-201ENST00000355059 ATP2B3Q16720 1220 aa13.21□□□□□ -0.3
NEIL1-201ENST00000355059 RRP12Q5JTH9 1297 aaKnown RBP13.21□□□□□ -0.3
NEIL1-201ENST00000355059 IFFO2Q5TF58 517 aa13.21□□□□□ -0.3
NEIL1-201ENST00000355059 GIGYF2Q6Y7W6 1299 aaKnown RBP13.21□□□□□ -0.3
NEIL1-201ENST00000355059 BICD2Q8TD16 824 aa13.21□□□□□ -0.3
NEIL1-201ENST00000355059 JAKMIP1Q96N16 626 aaKnown RBP13.21□□□□□ -0.3
NEIL1-201ENST00000355059 ECHDC1Q9NTX5 307 aa13.21□□□□□ -0.3
NEIL1-201ENST00000355059 GOLGA6L6A8MZA4 724 aa13.2□□□□□ -0.3
NEIL1-201ENST00000355059 CASTP20810 708 aaKnown RBP13.2□□□□□ -0.3
NEIL1-201ENST00000355059 ST5P78524 1137 aa13.2□□□□□ -0.3
NEIL1-201ENST00000355059 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
NEIL1-201ENST00000355059 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
NEIL1-201ENST00000355059 RBSNQ9H1K0 784 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms