RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 MPRIPQ6WCQ1 1025 aa20.9■□□□□ 0.94
APP-202ENST00000348990 ZNF589Q86UQ0 364 aaPredicted RBP20.9■□□□□ 0.94
APP-202ENST00000348990 A2ML1A8K2U0 1454 aa20.9■□□□□ 0.94
APP-202ENST00000348990 FBXO38Q6PIJ6 1188 aa20.9■□□□□ 0.94
APP-202ENST00000348990 SBNO1A3KN83 1393 aa20.9■□□□□ 0.94
APP-202ENST00000348990 ROBO2Q9HCK4 1378 aa20.9■□□□□ 0.94
APP-202ENST00000348990 PLEKHG3A1L390 1219 aa20.89■□□□□ 0.94
APP-202ENST00000348990 CCDC66A2RUB6 948 aa20.89■□□□□ 0.94
APP-202ENST00000348990 TAF3Q5VWG9 929 aa20.89■□□□□ 0.94
APP-202ENST00000348990 CEP57L1Q8IYX8 460 aa20.89■□□□□ 0.94
APP-202ENST00000348990 SLU7O95391 586 aaKnown RBP20.89■□□□□ 0.93
APP-202ENST00000348990 GTF3C6Q969F1 213 aa20.89■□□□□ 0.93
APP-202ENST00000348990 NEK1Q96PY6 1258 aa20.89■□□□□ 0.93
APP-202ENST00000348990 SYCP1Q15431 976 aa20.89■□□□□ 0.93
APP-202ENST00000348990 CCDC129Q6ZRS4 1044 aa20.89■□□□□ 0.93
APP-202ENST00000348990 OSCARQ8IYS5 282 aa20.89■□□□□ 0.93
APP-202ENST00000348990 FSIP1Q8NA03 581 aa20.89■□□□□ 0.93
APP-202ENST00000348990 BIN1O00499 593 aa20.88■□□□□ 0.93
APP-202ENST00000348990 PREX1Q8TCU6 1659 aa20.88■□□□□ 0.93
APP-202ENST00000348990 NRDCO43847 1150 aa20.88■□□□□ 0.93
APP-202ENST00000348990 NEMFO60524 1076 aa20.88■□□□□ 0.93
APP-202ENST00000348990 SLFN14P0C7P3 912 aa20.88■□□□□ 0.93
APP-202ENST00000348990 SNW1Q13573 536 aaKnown RBP20.88■□□□□ 0.93
APP-202ENST00000348990 TERF2Q15554 542 aa20.88■□□□□ 0.93
APP-202ENST00000348990 ANO10Q9NW15 660 aa20.88■□□□□ 0.93
APP-202ENST00000348990 EIF4A1P60842 406 aaKnown RBP20.87■□□□□ 0.93
APP-202ENST00000348990 ERCC6LQ2NKX8 1250 aa20.87■□□□□ 0.93
APP-202ENST00000348990 SYT10Q6XYQ8 523 aa20.87■□□□□ 0.93
APP-202ENST00000348990 MORC2Q9Y6X9 1032 aaPredicted RBP20.87■□□□□ 0.93
APP-202ENST00000348990 USP6P35125 1406 aa20.87■□□□□ 0.93
APP-202ENST00000348990 HOXC9P31274 260 aa20.87■□□□□ 0.93
APP-202ENST00000348990 TMC6Q7Z403 805 aa20.86■□□□□ 0.93
APP-202ENST00000348990 ERO1AQ96HE7 468 aa20.86■□□□□ 0.93
APP-202ENST00000348990 HDAC5Q9UQL6 1122 aa20.86■□□□□ 0.93
APP-202ENST00000348990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.86■□□□□ 0.93
APP-202ENST00000348990 VGLL3A8MV65 326 aa20.86■□□□□ 0.93
APP-202ENST00000348990 CAVIN2O95810 425 aa20.86■□□□□ 0.93
APP-202ENST00000348990 ISM2Q6H9L7 571 aa20.86■□□□□ 0.93
APP-202ENST00000348990 NAT10Q9H0A0 1025 aaKnown RBP20.86■□□□□ 0.93
APP-202ENST00000348990 BICC1Q9H694 974 aaKnown RBP20.86■□□□□ 0.93
APP-202ENST00000348990 IQCB1Q15051 598 aa20.85■□□□□ 0.93
APP-202ENST00000348990 FAM177A1Q8N128 213 aaPredicted RBP20.85■□□□□ 0.93
APP-202ENST00000348990 CCAR2Q8N163 923 aaKnown RBP20.85■□□□□ 0.93
APP-202ENST00000348990 DBF4Q9UBU7 674 aaPredicted RBP20.85■□□□□ 0.93
APP-202ENST00000348990 PROSER3Q2NL68 480 aa20.85■□□□□ 0.93
APP-202ENST00000348990 ZNF530Q6P9A1 599 aaPredicted RBP20.85■□□□□ 0.93
APP-202ENST00000348990 OVOS2A0A0J9YW53 1432 aa20.85■□□□□ 0.93
APP-202ENST00000348990 OVOS2Q6IE36 1432 aa20.85■□□□□ 0.93
APP-202ENST00000348990 SASH1O94885 1247 aa20.85■□□□□ 0.93
APP-202ENST00000348990 FAM69CQ0P6D2 419 aa20.85■□□□□ 0.93
APP-202ENST00000348990 RESTQ13127 1097 aa20.85■□□□□ 0.93
APP-202ENST00000348990 MRFAP1L1Q96HT8 127 aa20.85■□□□□ 0.93
APP-202ENST00000348990 ZSCAN16Q9H4T2 348 aaPredicted RBP20.85■□□□□ 0.93
APP-202ENST00000348990 NEO1Q92859 1461 aa20.84■□□□□ 0.93
APP-202ENST00000348990 POLR3GO15318 223 aaPredicted RBP20.84■□□□□ 0.93
APP-202ENST00000348990 CHGBP05060 677 aa20.84■□□□□ 0.93
APP-202ENST00000348990 SUCLG2Q96I99 432 aa20.84■□□□□ 0.93
APP-202ENST00000348990 SEC62Q99442 399 aaKnown RBP20.84■□□□□ 0.93
APP-202ENST00000348990 CHMP4AQ9BY43 222 aa20.84■□□□□ 0.93
APP-202ENST00000348990 CTAGE5O15320 804 aa20.84■□□□□ 0.93
APP-202ENST00000348990 RIC3Q7Z5B4 369 aa20.84■□□□□ 0.93
APP-202ENST00000348990 KLHL34Q8N239 644 aa20.84■□□□□ 0.93
APP-202ENST00000348990 RIMS1Q86UR5 1692 aaKnown RBP20.84■□□□□ 0.93
APP-202ENST00000348990 KRT32Q14532 448 aa20.83■□□□□ 0.93
APP-202ENST00000348990 USP28Q96RU2 1077 aa20.83■□□□□ 0.93
APP-202ENST00000348990 SFPQP23246 707 aaKnown RBP eCLIP20.83■□□□□ 0.93
APP-202ENST00000348990 NOL10Q9BSC4 688 aaKnown RBP20.83■□□□□ 0.93
APP-202ENST00000348990 NCOA5Q9HCD5 579 aaKnown RBP20.83■□□□□ 0.93
APP-202ENST00000348990 A0A1B0GVL5 298 aa20.83■□□□□ 0.92
APP-202ENST00000348990 CHST3Q7LGC8 479 aa20.83■□□□□ 0.92
APP-202ENST00000348990 CEP170BQ9Y4F5 1589 aaPredicted RBP20.82■□□□□ 0.92
APP-202ENST00000348990 APOBRQ0VD83 1088 aa20.82■□□□□ 0.92
APP-202ENST00000348990 GOLPH3LQ9H4A5 285 aa20.82■□□□□ 0.92
APP-202ENST00000348990 HMG20BQ9P0W2 317 aa20.82■□□□□ 0.92
APP-202ENST00000348990 MNS1Q8NEH6 495 aa20.82■□□□□ 0.92
APP-202ENST00000348990 ZNF396Q96N95 335 aaPredicted RBP20.82■□□□□ 0.92
APP-202ENST00000348990 IFNKQ9P0W0 207 aa20.82■□□□□ 0.92
APP-202ENST00000348990 KCNB2Q92953 911 aa20.82■□□□□ 0.92
APP-202ENST00000348990 PRAMEF22A3QJZ6 481 aa20.81■□□□□ 0.92
APP-202ENST00000348990 GRM8O00222 908 aa20.81■□□□□ 0.92
APP-202ENST00000348990 MYL6BP14649 208 aa20.81■□□□□ 0.92
APP-202ENST00000348990 CDC25BP30305 580 aa20.81■□□□□ 0.92
APP-202ENST00000348990 ARHGAP29Q52LW3 1261 aa20.81■□□□□ 0.92
APP-202ENST00000348990 RBM43Q6ZSC3 357 aaKnown RBP20.81■□□□□ 0.92
APP-202ENST00000348990 DDX46Q7L014 1031 aaKnown RBP20.81■□□□□ 0.92
APP-202ENST00000348990 TAF5LO75529 589 aa20.81■□□□□ 0.92
APP-202ENST00000348990 KDRP35968 1356 aa20.81■□□□□ 0.92
APP-202ENST00000348990 LMOD2Q6P5Q4 547 aa20.81■□□□□ 0.92
APP-202ENST00000348990 TIGD1Q96MW7 591 aa20.81■□□□□ 0.92
APP-202ENST00000348990 USP42Q9H9J4 1324 aaKnown RBP20.81■□□□□ 0.92
APP-202ENST00000348990 SCRN1Q12765 414 aa20.8■□□□□ 0.92
APP-202ENST00000348990 GNL2Q13823 731 aaKnown RBP20.8■□□□□ 0.92
APP-202ENST00000348990 BMS1Q14692 1282 aaKnown RBP20.8■□□□□ 0.92
APP-202ENST00000348990 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
APP-202ENST00000348990 KSR2Q6VAB6 950 aa20.8■□□□□ 0.92
APP-202ENST00000348990 POLR3DP05423 398 aaPredicted RBP20.8■□□□□ 0.92
APP-202ENST00000348990 CCZ1BP86790 482 aa20.8■□□□□ 0.92
APP-202ENST00000348990 CCZ1P86791 482 aaPredicted RBP20.8■□□□□ 0.92
APP-202ENST00000348990 STK38Q15208 465 aa20.8■□□□□ 0.92
APP-202ENST00000348990 DNAI1Q9UI46 699 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms