RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 BMP15O95972 392 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 TCERG1LQ5VWI1 586 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 FSIP1Q8NA03 581 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 ATP8B2P98198 1209 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 KANK3Q6NY19 840 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 MPNDQ8N594 471 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 NUP153P49790 1475 aaKnown RBP17.8■□□□□ 0.44
PTPRO-202ENST00000348962 CCDC183Q5T5S1 534 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 CKAP2LQ8IYA6 745 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 TBCAO75347 108 aaKnown RBP17.79■□□□□ 0.44
PTPRO-202ENST00000348962 GNAT2P19087 354 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 ANAPC15P60006 121 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 CCDC40Q4G0X9 1142 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 RBM26Q5T8P6 1007 aaKnown RBP17.79■□□□□ 0.44
PTPRO-202ENST00000348962 DDX19AQ9NUU7 478 aaKnown RBP17.79■□□□□ 0.44
PTPRO-202ENST00000348962 KLF18A0A0U1RQI7 1052 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 GBP2P32456 591 aaPredicted RBP17.79■□□□□ 0.44
PTPRO-202ENST00000348962 TBC1D9Q6ZT07 1266 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 CCNL1Q9UK58 526 aaPredicted RBP17.79■□□□□ 0.44
PTPRO-202ENST00000348962 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 MCMDC2Q4G0Z9 681 aa17.79■□□□□ 0.44
PTPRO-202ENST00000348962 MTIF2P46199 727 aaKnown RBP17.78■□□□□ 0.44
PTPRO-202ENST00000348962 ENOX2Q16206 610 aaKnown RBP17.78■□□□□ 0.44
PTPRO-202ENST00000348962 HOXC9P31274 260 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 TNNI2P48788 182 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 CNBD1Q8NA66 436 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 BRF1Q92994 677 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 VTI1AQ96AJ9 217 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 MAP7D2Q96T17 732 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 CWC15Q9P013 229 aaKnown RBP17.78■□□□□ 0.44
PTPRO-202ENST00000348962 SYCE3A1L190 88 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 TOP1P11387 765 aaKnown RBP17.78■□□□□ 0.44
PTPRO-202ENST00000348962 RBM25P49756 843 aaKnown RBP17.78■□□□□ 0.44
PTPRO-202ENST00000348962 TAX1BP1Q86VP1 789 aa17.78■□□□□ 0.44
PTPRO-202ENST00000348962 RBM27Q9P2N5 1060 aaKnown RBP17.78■□□□□ 0.44
PTPRO-202ENST00000348962 MAGEB6P1A0A0J9YX57 407 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.44
PTPRO-202ENST00000348962 GJB2P29033 226 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 TDRD12Q587J7 1177 aaKnown RBP17.77■□□□□ 0.44
PTPRO-202ENST00000348962 RBM17Q96I25 401 aaKnown RBP17.77■□□□□ 0.44
PTPRO-202ENST00000348962 PARP10Q53GL7 1025 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 TSHZ3Q63HK5 1081 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 CCDC174Q6PII3 467 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 WWC3Q9ULE0 1092 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 ZSCAN12O43309 604 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 TSPYL1Q9H0U9 437 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 CENPHQ9H3R5 247 aa17.77■□□□□ 0.44
PTPRO-202ENST00000348962 RNMTO43148 476 aaKnown RBP17.77■□□□□ 0.43
PTPRO-202ENST00000348962 RTN1Q16799 776 aa17.77■□□□□ 0.43
PTPRO-202ENST00000348962 SOS1Q07889 1333 aaPredicted RBP17.77■□□□□ 0.43
PTPRO-202ENST00000348962 USP37Q86T82 979 aa17.76■□□□□ 0.43
PTPRO-202ENST00000348962 STX6O43752 255 aa17.76■□□□□ 0.43
PTPRO-202ENST00000348962 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
PTPRO-202ENST00000348962 FAM114A1Q8IWE2 563 aa17.76■□□□□ 0.43
PTPRO-202ENST00000348962 USO1O60763 962 aaKnown RBP17.76■□□□□ 0.43
PTPRO-202ENST00000348962 CCDC102BQ68D86 513 aa17.76■□□□□ 0.43
PTPRO-202ENST00000348962 SMARCC2Q8TAQ2 1214 aa17.76■□□□□ 0.43
PTPRO-202ENST00000348962 CCDC97Q96F63 343 aaPredicted RBP17.76■□□□□ 0.43
PTPRO-202ENST00000348962 MAP3K19Q56UN5 1328 aa17.76■□□□□ 0.43
PTPRO-202ENST00000348962 KIF2AO00139 706 aaPredicted RBP17.76■□□□□ 0.43
PTPRO-202ENST00000348962 FERMT2Q96AC1 680 aa17.76■□□□□ 0.43
PTPRO-202ENST00000348962 ASXL1Q8IXJ9 1541 aa17.76■□□□□ 0.43
PTPRO-202ENST00000348962 HDAC1Q13547 482 aaPredicted RBP17.75■□□□□ 0.43
PTPRO-202ENST00000348962 RAB11FIP4Q86YS3 637 aa17.75■□□□□ 0.43
PTPRO-202ENST00000348962 BICD1Q96G01 975 aa17.75■□□□□ 0.43
PTPRO-202ENST00000348962 YEATS4O95619 227 aa17.75■□□□□ 0.43
PTPRO-202ENST00000348962 LARP6Q9BRS8 491 aaKnown RBP17.75■□□□□ 0.43
PTPRO-202ENST00000348962 RIMBP2O15034 1052 aa17.75■□□□□ 0.43
PTPRO-202ENST00000348962 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
PTPRO-202ENST00000348962 ZSCAN16Q9H4T2 348 aaPredicted RBP17.75■□□□□ 0.43
PTPRO-202ENST00000348962 PAG1Q9NWQ8 432 aa17.75■□□□□ 0.43
PTPRO-202ENST00000348962 TFIP11Q9UBB9 837 aaKnown RBP17.75■□□□□ 0.43
PTPRO-202ENST00000348962 PDE1AP54750 535 aa17.75■□□□□ 0.43
PTPRO-202ENST00000348962 DDX21Q9NR30 783 aaKnown RBP eCLIP17.75■□□□□ 0.43
PTPRO-202ENST00000348962 MCM9Q9NXL9 1143 aa17.75■□□□□ 0.43
PTPRO-202ENST00000348962 CALM1P0DP23 149 aa17.74■□□□□ 0.43
PTPRO-202ENST00000348962 CALM2P0DP24 149 aa17.74■□□□□ 0.43
PTPRO-202ENST00000348962 CALM3P0DP25 149 aa17.74■□□□□ 0.43
PTPRO-202ENST00000348962 USP8P40818 1118 aa17.74■□□□□ 0.43
PTPRO-202ENST00000348962 MRPL50Q8N5N7 158 aaKnown RBP17.74■□□□□ 0.43
PTPRO-202ENST00000348962 TTC6Q86TZ1 520 aa17.74■□□□□ 0.43
PTPRO-202ENST00000348962 HELBQ8NG08 1087 aaPredicted RBP17.74■□□□□ 0.43
PTPRO-202ENST00000348962 PANK2Q9BZ23 570 aa17.74■□□□□ 0.43
PTPRO-202ENST00000348962 C6orf50Q9HD87 102 aa17.74■□□□□ 0.43
PTPRO-202ENST00000348962 NUP88Q99567 741 aaPredicted RBP17.74■□□□□ 0.43
PTPRO-202ENST00000348962 POLR3AO14802 1390 aaPredicted RBP17.74■□□□□ 0.43
PTPRO-202ENST00000348962 LEKR1Q6ZMV7 388 aa17.73■□□□□ 0.43
PTPRO-202ENST00000348962 KAT6BQ8WYB5 2073 aa17.73■□□□□ 0.43
PTPRO-202ENST00000348962 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
PTPRO-202ENST00000348962 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
PTPRO-202ENST00000348962 SH3TC1Q8TE82 1336 aa17.73■□□□□ 0.43
PTPRO-202ENST00000348962 KIF5CO60282 957 aa17.73■□□□□ 0.43
PTPRO-202ENST00000348962 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
PTPRO-202ENST00000348962 ABCC1P33527 1531 aa17.73■□□□□ 0.43
PTPRO-202ENST00000348962 NAPAP54920 295 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 ALG1Q9BT22 464 aa17.72■□□□□ 0.43
PTPRO-202ENST00000348962 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms