RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 MTMR6Q9Y217 621 aa13□□□□□ -0.33
SEMA4D-201ENST00000339861 SERPINC1P01008 464 aa13□□□□□ -0.33
SEMA4D-201ENST00000339861 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
SEMA4D-201ENST00000339861 CUL4AQ13619 759 aa13□□□□□ -0.33
SEMA4D-201ENST00000339861 MED14O60244 1454 aa13□□□□□ -0.33
SEMA4D-201ENST00000339861 NRXN1Q9ULB1 1477 aa13□□□□□ -0.33
SEMA4D-201ENST00000339861 ARHGEF10O15013 1369 aa13□□□□□ -0.33
SEMA4D-201ENST00000339861 PIBF1Q8WXW3 757 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 ZNF594Q96JF6 807 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 DDX19AQ9NUU7 478 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 AKAP17AQ02040 695 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 TTC6Q86TZ1 520 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 ARHGEF40Q8TER5 1519 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 USP6P35125 1406 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 NEXMIFQ5QGS0 1516 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 RXRAP19793 462 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 PI4K2BQ8TCG2 481 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 TBX22Q9Y458 520 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 TSPOAP1O95153 1857 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 GOLGA8BA8MQT2 603 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 LRMPQ12912 555 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 NUP133Q8WUM0 1156 aa12.99□□□□□ -0.33
SEMA4D-201ENST00000339861 CPS1P31327 1500 aa12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 ATP10DQ9P241 1426 aa12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 CYP2E1P05181 493 aaPredicted RBP12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 MNS1Q8NEH6 495 aa12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 USP16Q9Y5T5 823 aa12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 A2ML1A8K2U0 1454 aa12.98□□□□□ -0.33
SEMA4D-201ENST00000339861 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 MARCKSP29966 332 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 MCMDC2Q4G0Z9 681 aa12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 METTL24Q5JXM2 366 aa12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 RPS6KB1P23443 525 aa12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 PTPN14Q15678 1187 aa12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 ZNF790Q6PG37 636 aa12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 ZNF589Q86UQ0 364 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 IMMTQ16891 758 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 MICU3Q86XE3 530 aa12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 IFNL2Q8IZJ0 200 aa12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 RGS12O14924 1447 aa12.97□□□□□ -0.33
SEMA4D-201ENST00000339861 ORC3Q9UBD5 711 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 AOPEPQ8N6M6 819 aa12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 MYO3AQ8NEV4 1616 aa12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 PTPDC1A2A3K4 754 aa12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 CHGBP05060 677 aa12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 CBX8Q9HC52 389 aa12.96□□□□□ -0.33
SEMA4D-201ENST00000339861 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.34
SEMA4D-201ENST00000339861 A0A1B0GVL5 298 aa12.96□□□□□ -0.34
SEMA4D-201ENST00000339861 SAFBQ15424 915 aaKnown RBP eCLIP12.96□□□□□ -0.34
SEMA4D-201ENST00000339861 OLFM4Q6UX06 510 aa12.96□□□□□ -0.34
SEMA4D-201ENST00000339861 PYCARDQ9ULZ3 195 aa12.96□□□□□ -0.34
SEMA4D-201ENST00000339861 NPHP3Q7Z494 1330 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 NR1I2O75469 434 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 TMC6Q7Z403 805 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 ARHGAP31Q2M1Z3 1444 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 KIF6Q6ZMV9 814 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 ANO10Q9NW15 660 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 HMG20BQ9P0W2 317 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 NRBP1Q9UHY1 535 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 TBC1D2BQ9UPU7 963 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 RIOK3O14730 519 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 LMTK2Q8IWU2 1503 aa12.95□□□□□ -0.34
SEMA4D-201ENST00000339861 SKILP12757 684 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 TNNI3KQ59H18 835 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 VPS37DQ86XT2 251 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 PAG1Q9NWQ8 432 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 FPGT-TNNI3KV9GXZ4 949 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 ERICH2A1L162 156 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 GCKRQ14397 625 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 PRIMPOLQ96LW4 560 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 AOX1Q06278 1338 aa12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 ZC3H13Q5T200 1668 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-201ENST00000339861 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 ZNF213O14771 459 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 A1BGP04217 495 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 SASH1O94885 1247 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 LMOD1P29536 600 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 KLHL10Q6JEL2 608 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 HELBQ8NG08 1087 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms