RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
TNPO1-201ENST00000337273 HCLS1P14317 486 aaPredicted RBP9.17□□□□□ -0.94
TNPO1-201ENST00000337273 CTNNA2P26232 953 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 U2AF2P26368 475 aaKnown RBP eCLIP9.17□□□□□ -0.944e-7■■■□□ 19.2
TNPO1-201ENST00000337273 SSR1P43307 286 aaKnown RBP9.17□□□□□ -0.94
TNPO1-201ENST00000337273 GOLGA8AA7E2F4 631 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 GOLGA8BA8MQT2 603 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 KRT86O43790 486 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 SLC5A1P13866 664 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 AFAP1Q8N556 730 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 KIF14Q15058 1648 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 ZBTB22O15209 634 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 INTS4Q96HW7 963 aaKnown RBP9.17□□□□□ -0.94
TNPO1-201ENST00000337273 TSNARE1Q96NA8 513 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 CCDC77Q9BR77 488 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 ACTN2P35609 894 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.17□□□□□ -0.94
TNPO1-201ENST00000337273 NUCB1Q02818 461 aa9.17□□□□□ -0.94
TNPO1-201ENST00000337273 CTAGE9A4FU28 777 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 PDE4BQ07343 736 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 KIF4AO95239 1232 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 IFIT5Q13325 482 aaKnown RBP9.16□□□□□ -0.94
TNPO1-201ENST00000337273 CNNM2Q9H8M5 875 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 IKBKGQ9Y6K9 419 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 TRIM27P14373 513 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 C10orf67Q8IYJ2 551 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 HOMER2Q9NSB8 354 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 CPA1P15085 419 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 IRX3P78415 501 aaPredicted RBP9.16□□□□□ -0.94
TNPO1-201ENST00000337273 CAMSAP2Q08AD1 1489 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 USP5P45974 858 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 PIK3R4Q99570 1358 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.16□□□□□ -0.94
TNPO1-201ENST00000337273 GOLGA1Q92805 767 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 UIMC1Q96RL1 719 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 SMIM23A6NLE4 172 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 NECAB1Q8N987 351 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 ANKRD36BQ8N2N9 1353 aa9.16□□□□□ -0.94
TNPO1-201ENST00000337273 IFIT3O14879 490 aaKnown RBP9.16□□□□□ -0.94
TNPO1-201ENST00000337273 ZSCAN29Q8IWY8 852 aaPredicted RBP9.16□□□□□ -0.94
TNPO1-201ENST00000337273 CCDC94Q9BW85 323 aaPredicted RBP9.16□□□□□ -0.94
TNPO1-201ENST00000337273 CCDC82Q8N4S0 544 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 PRG4Q92954 1404 aaPredicted RBP9.15□□□□□ -0.94
TNPO1-201ENST00000337273 TSGA10Q9BZW7 698 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 STRN4Q9NRL3 753 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 CEP128Q6ZU80 1094 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 ATP2A1O14983 1001 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 MAATS1Q7Z4T9 603 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 TBC1D5Q92609 795 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 UBA7P41226 1012 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 BOLA2Q9H3K6 86 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 NUDT16Q96DE0 195 aaKnown RBP9.15□□□□□ -0.94
TNPO1-201ENST00000337273 KRT23Q9C075 422 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 OGFRQ9NZT2 677 aa9.15□□□□□ -0.94
TNPO1-201ENST00000337273 SOS1Q07889 1333 aaPredicted RBP9.15□□□□□ -0.95
TNPO1-201ENST00000337273 LDHCP07864 332 aa9.15□□□□□ -0.95
TNPO1-201ENST00000337273 METAP2P50579 478 aaKnown RBP eCLIP9.15□□□□□ -0.95
TNPO1-201ENST00000337273 HMGXB3Q12766 1538 aa9.15□□□□□ -0.95
TNPO1-201ENST00000337273 EBAG9O00559 213 aa9.15□□□□□ -0.95
TNPO1-201ENST00000337273 SKILP12757 684 aa9.15□□□□□ -0.95
TNPO1-201ENST00000337273 SPTY2D1Q68D10 685 aaPredicted RBP9.15□□□□□ -0.95
TNPO1-201ENST00000337273 FBF1Q8TES7 1133 aa9.15□□□□□ -0.95
TNPO1-201ENST00000337273 PROSER2Q86WR7 435 aaPredicted RBP9.14□□□□□ -0.95
TNPO1-201ENST00000337273 ABCF2Q9UG63 623 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 TACC1O75410 805 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 UQCRFS1P1P0C7P4 283 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 SYKP43405 635 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 KARSQ15046 597 aaKnown RBP9.14□□□□□ -0.95
TNPO1-201ENST00000337273 CCDC40Q4G0X9 1142 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 CCT2P78371 535 aaKnown RBP9.14□□□□□ -0.95
TNPO1-201ENST00000337273 TMX3Q96JJ7 454 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 POLR3DP05423 398 aaPredicted RBP9.14□□□□□ -0.95
TNPO1-201ENST00000337273 UBE4AQ14139 1066 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 EXOC1Q9NV70 894 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.14□□□□□ -0.952e-6■■□□□ 12.9
TNPO1-201ENST00000337273 CROCCP2Q86T23 111 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 NBPF11Q86T75 865 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 BICDL2A1A5D9 508 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 RBM5P52756 815 aaKnown RBP eCLIP9.14□□□□□ -0.95
TNPO1-201ENST00000337273 FLIIQ13045 1269 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 MSL1Q68DK7 614 aa9.14□□□□□ -0.95
TNPO1-201ENST00000337273 N4BP3O15049 544 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 DAAM2Q86T65 1068 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 SMAP1Q8IYB5 467 aaPredicted RBP9.13□□□□□ -0.95
TNPO1-201ENST00000337273 FERMT2Q96AC1 680 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 PSMA7O14818 248 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 GNAQP50148 359 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 KIF5AQ12840 1032 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 USHBP1Q8N6Y0 703 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 TRMT1LQ7Z2T5 733 aaKnown RBP9.13□□□□□ -0.95
TNPO1-201ENST00000337273 MRPS27Q92552 414 aaKnown RBP9.13□□□□□ -0.95
TNPO1-201ENST00000337273 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
TNPO1-201ENST00000337273 SMC5Q8IY18 1101 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 JAKMIP2Q96AA8 810 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 SCLT1Q96NL6 688 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 MINDY4BA8MYZ0 360 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 CTNNBL1Q8WYA6 563 aaPredicted RBP9.13□□□□□ -0.95
TNPO1-201ENST00000337273 IQCGQ9H095 443 aaKnown RBP9.13□□□□□ -0.95
TNPO1-201ENST00000337273 A0A1W2PRG0 241 aa9.13□□□□□ -0.95
TNPO1-201ENST00000337273 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms