RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.87□□□□□ -0.35
LRAT-201ENST00000336356 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 E9PCH4 1651 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 HIP1O00291 1037 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 STX6O43752 255 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 ANAPC15P60006 121 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 SYNE3Q6ZMZ3 975 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 HDAC9Q9UKV0 1011 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 MST1RQ04912 1400 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 ERBB3P21860 1342 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 CTAGE5O15320 804 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 ALDH1B1P30837 517 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 CPLX2Q6PUV4 134 aaKnown RBP12.86□□□□□ -0.35
LRAT-201ENST00000336356 ANKRD20A12PQ8NF67 263 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 IVLP07476 585 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
LRAT-201ENST00000336356 LIMCH1Q9UPQ0 1083 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 ZSCAN12O43309 604 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 ZNF165P49910 485 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 PDILTQ8N807 584 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 RBM17Q96I25 401 aaKnown RBP12.86□□□□□ -0.35
LRAT-201ENST00000336356 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 ANO10Q9NW15 660 aa12.86□□□□□ -0.35
LRAT-201ENST00000336356 CAMK4Q16566 473 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 CNKSR1Q969H4 720 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 TESK2Q96S53 571 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
LRAT-201ENST00000336356 USP19O94966 1318 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 SNW1Q13573 536 aaKnown RBP12.85□□□□□ -0.35
LRAT-201ENST00000336356 GIMAP6Q6P9H5 292 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 CNBD1Q8NA66 436 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 PDRG1Q9NUG6 133 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 KIAA0754O94854 1291 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 ERC1Q8IUD2 1116 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 ZBTB40Q9NUA8 1239 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 SPATA31A5Q5VU36 1347 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 SPATA31A7Q8IWB4 1347 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 GRIPAP1Q4V328 841 aa12.85□□□□□ -0.35
LRAT-201ENST00000336356 URI1O94763 535 aaPredicted RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 IPO4Q8TEX9 1081 aaKnown RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 MYO1BO43795 1136 aa12.84□□□□□ -0.35
LRAT-201ENST00000336356 CCAR1Q8IX12 1150 aaKnown RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 NEURL4Q96JN8 1562 aa12.84□□□□□ -0.35
LRAT-201ENST00000336356 EIF6P56537 245 aaKnown RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 CLASRPQ8N2M8 674 aaKnown RBP12.84□□□□□ -0.35
LRAT-201ENST00000336356 SPATA31A1Q5TZJ5 1347 aa12.84□□□□□ -0.35
LRAT-201ENST00000336356 SERPINC1P01008 464 aa12.84□□□□□ -0.35
LRAT-201ENST00000336356 CCDC152Q4G0S7 254 aa12.84□□□□□ -0.35
LRAT-201ENST00000336356 ERO1AQ96HE7 468 aa12.84□□□□□ -0.35
LRAT-201ENST00000336356 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 VGLL3A8MV65 326 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.36
LRAT-201ENST00000336356 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
LRAT-201ENST00000336356 V9GYY5 206 aaPredicted RBP12.83□□□□□ -0.36
LRAT-201ENST00000336356 PAXIP1Q6ZW49 1069 aaPredicted RBP12.83□□□□□ -0.36
LRAT-201ENST00000336356 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
LRAT-201ENST00000336356 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
LRAT-201ENST00000336356 AXDND1Q5T1B0 1012 aaPredicted RBP12.83□□□□□ -0.36
LRAT-201ENST00000336356 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 CPLX1O14810 134 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 TMEM63CQ9P1W3 806 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
LRAT-201ENST00000336356 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
LRAT-201ENST00000336356 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
LRAT-201ENST00000336356 LMAN1P49257 510 aa12.82□□□□□ -0.36
LRAT-201ENST00000336356 CDR1P51861 262 aa12.82□□□□□ -0.36
LRAT-201ENST00000336356 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
LRAT-201ENST00000336356 SKILP12757 684 aa12.82□□□□□ -0.36
LRAT-201ENST00000336356 CAVIN4Q5BKX8 364 aa12.82□□□□□ -0.36
LRAT-201ENST00000336356 CKAP2LQ8IYA6 745 aa12.82□□□□□ -0.36
LRAT-201ENST00000336356 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 USP26Q9BXU7 913 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
LRAT-201ENST00000336356 SDSP20132 328 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
LRAT-201ENST00000336356 PTGS1P23219 599 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 ME1P48163 572 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 TRMT2AQ8IZ69 625 aaKnown RBP12.81□□□□□ -0.36
LRAT-201ENST00000336356 GIMAP7Q8NHV1 300 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 HOXB7P09629 217 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 BLOC1S2Q6QNY1 142 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
LRAT-201ENST00000336356 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms