RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 COL9A3Q14050 684 aaPredicted RBP21.16■□□□□ 0.98
LRCH3-201ENST00000334859 LMBR1LQ6UX01 489 aa21.16■□□□□ 0.98
LRCH3-201ENST00000334859 COL15A1P39059 1388 aa21.16■□□□□ 0.98
LRCH3-201ENST00000334859 DBNDD2Q9BQY9 259 aa21.16■□□□□ 0.98
LRCH3-201ENST00000334859 TAF6LQ9Y6J9 622 aa21.16■□□□□ 0.98
LRCH3-201ENST00000334859 NBPF26B4DH59 902 aa21.15■□□□□ 0.98
LRCH3-201ENST00000334859 NBPF14Q5TI25 921 aa21.15■□□□□ 0.98
LRCH3-201ENST00000334859 NBPF10Q6P3W6 841 aaKnown RBP21.15■□□□□ 0.98
LRCH3-201ENST00000334859 NBPF15Q8N660 670 aa21.15■□□□□ 0.98
LRCH3-201ENST00000334859 PDLIM2Q96JY6 352 aa21.15■□□□□ 0.98
LRCH3-201ENST00000334859 CCDC9Q9Y3X0 531 aaKnown RBP21.15■□□□□ 0.98
LRCH3-201ENST00000334859 WDR17Q8IZU2 1322 aa21.15■□□□□ 0.98
LRCH3-201ENST00000334859 MSNP26038 577 aaKnown RBP21.15■□□□□ 0.98
LRCH3-201ENST00000334859 ZCRB1Q8TBF4 217 aaKnown RBP21.15■□□□□ 0.98
LRCH3-201ENST00000334859 MTMR6Q9Y217 621 aa21.15■□□□□ 0.98
LRCH3-201ENST00000334859 HSPA2P54652 639 aa21.14■□□□□ 0.97
LRCH3-201ENST00000334859 CASP7P55210 303 aa21.14■□□□□ 0.97
LRCH3-201ENST00000334859 JCADQ9P266 1359 aa21.14■□□□□ 0.97
LRCH3-201ENST00000334859 UBE2HP62256 183 aa21.13■□□□□ 0.97
LRCH3-201ENST00000334859 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
LRCH3-201ENST00000334859 HMG20BQ9P0W2 317 aa21.13■□□□□ 0.97
LRCH3-201ENST00000334859 TAF5LO75529 589 aa21.13■□□□□ 0.97
LRCH3-201ENST00000334859 RPS6KB1P23443 525 aa21.13■□□□□ 0.97
LRCH3-201ENST00000334859 ANKRD1Q15327 319 aa21.13■□□□□ 0.97
LRCH3-201ENST00000334859 TTLL7Q6ZT98 887 aa21.13■□□□□ 0.97
LRCH3-201ENST00000334859 DNM1Q05193 864 aaKnown RBP21.12■□□□□ 0.97
LRCH3-201ENST00000334859 CCDC183Q5T5S1 534 aa21.12■□□□□ 0.97
LRCH3-201ENST00000334859 DDX46Q7L014 1031 aaKnown RBP21.12■□□□□ 0.97
LRCH3-201ENST00000334859 CWC25Q9NXE8 425 aaPredicted RBP21.12■□□□□ 0.97
LRCH3-201ENST00000334859 ZNF609O15014 1411 aa21.11■□□□□ 0.97
LRCH3-201ENST00000334859 A1BGP04217 495 aa21.11■□□□□ 0.97
LRCH3-201ENST00000334859 CHGBP05060 677 aa21.11■□□□□ 0.97
LRCH3-201ENST00000334859 CSPP1Q1MSJ5 1256 aa21.11■□□□□ 0.97
LRCH3-201ENST00000334859 ZBTB3Q9H5J0 574 aa21.11■□□□□ 0.97
LRCH3-201ENST00000334859 FOXO4P98177 505 aa21.1■□□□□ 0.97
LRCH3-201ENST00000334859 HS1BP3Q53T59 392 aa21.1■□□□□ 0.97
LRCH3-201ENST00000334859 LARP1BQ659C4 914 aaKnown RBP21.1■□□□□ 0.97
LRCH3-201ENST00000334859 CCDC129Q6ZRS4 1044 aa21.1■□□□□ 0.97
LRCH3-201ENST00000334859 HAUS7Q99871 368 aa21.1■□□□□ 0.97
LRCH3-201ENST00000334859 RFX7Q2KHR2 1363 aa21.1■□□□□ 0.97
LRCH3-201ENST00000334859 H7C1W4 665 aa21.09■□□□□ 0.97
LRCH3-201ENST00000334859 NEUROD6Q96NK8 337 aa21.09■□□□□ 0.97
LRCH3-201ENST00000334859 ERVV-2B6SEH9 535 aa21.09■□□□□ 0.97
LRCH3-201ENST00000334859 SEC62Q99442 399 aaKnown RBP21.09■□□□□ 0.97
LRCH3-201ENST00000334859 NUP188Q5SRE5 1749 aa21.09■□□□□ 0.97
LRCH3-201ENST00000334859 COL5A2P05997 1499 aaPredicted RBP21.09■□□□□ 0.97
LRCH3-201ENST00000334859 UBR2Q8IWV8 1755 aa21.09■□□□□ 0.97
LRCH3-201ENST00000334859 STK3Q13188 491 aa21.08■□□□□ 0.97
LRCH3-201ENST00000334859 TOB2Q14106 344 aaPredicted RBP21.08■□□□□ 0.97
LRCH3-201ENST00000334859 KRT32Q14532 448 aa21.08■□□□□ 0.97
LRCH3-201ENST00000334859 XIRP1Q702N8 1843 aaKnown RBP21.08■□□□□ 0.97
LRCH3-201ENST00000334859 USPL1Q5W0Q7 1092 aa21.08■□□□□ 0.96
LRCH3-201ENST00000334859 KCPQ6ZWJ8 1503 aa21.08■□□□□ 0.96
LRCH3-201ENST00000334859 PDCP20941 246 aa21.07■□□□□ 0.96
LRCH3-201ENST00000334859 TSGA10IPQ3SY00 556 aa21.07■□□□□ 0.96
LRCH3-201ENST00000334859 CDC37L1Q7L3B6 337 aa21.07■□□□□ 0.96
LRCH3-201ENST00000334859 FERMT3Q86UX7 667 aa21.07■□□□□ 0.96
LRCH3-201ENST00000334859 TJP1Q07157 1748 aa21.07■□□□□ 0.96
LRCH3-201ENST00000334859 IL2RBP14784 551 aa21.07■□□□□ 0.96
LRCH3-201ENST00000334859 MCMDC2Q4G0Z9 681 aa21.07■□□□□ 0.96
LRCH3-201ENST00000334859 U3KPZ7 1027 aaPredicted RBP21.07■□□□□ 0.96
LRCH3-201ENST00000334859 ATG9AQ7Z3C6 839 aa21.06■□□□□ 0.96
LRCH3-201ENST00000334859 STRN4Q9NRL3 753 aa21.06■□□□□ 0.96
LRCH3-201ENST00000334859 GOLIM4O00461 696 aa21.06■□□□□ 0.96
LRCH3-201ENST00000334859 KBTBD3Q8NAB2 608 aa21.06■□□□□ 0.96
LRCH3-201ENST00000334859 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
LRCH3-201ENST00000334859 ALDH8A1Q9H2A2 487 aaPredicted RBP21.06■□□□□ 0.96
LRCH3-201ENST00000334859 ZNF330Q9Y3S2 320 aaPredicted RBP21.06■□□□□ 0.96
LRCH3-201ENST00000334859 LETM1O95202 739 aaPredicted RBP21.05■□□□□ 0.96
LRCH3-201ENST00000334859 NOL7Q9UMY1 257 aaKnown RBP21.05■□□□□ 0.96
LRCH3-201ENST00000334859 FAM184AQ8NB25 1140 aa21.04■□□□□ 0.96
LRCH3-201ENST00000334859 CCDC191Q8NCU4 936 aa21.04■□□□□ 0.96
LRCH3-201ENST00000334859 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
LRCH3-201ENST00000334859 IL15P40933 162 aaPredicted RBP21.04■□□□□ 0.96
LRCH3-201ENST00000334859 TIMM10P62072 90 aa21.04■□□□□ 0.96
LRCH3-201ENST00000334859 ZNF594Q96JF6 807 aaPredicted RBP21.04■□□□□ 0.96
LRCH3-201ENST00000334859 PAG1Q9NWQ8 432 aa21.04■□□□□ 0.96
LRCH3-201ENST00000334859 CCDC39Q9UFE4 941 aa21.04■□□□□ 0.96
LRCH3-201ENST00000334859 PDIA4P13667 645 aaKnown RBP21.03■□□□□ 0.96
LRCH3-201ENST00000334859 HSP90B1P14625 803 aaKnown RBP21.03■□□□□ 0.96
LRCH3-201ENST00000334859 KRT85P78386 507 aa21.03■□□□□ 0.96
LRCH3-201ENST00000334859 CYP21A2P08686 494 aa21.03■□□□□ 0.96
LRCH3-201ENST00000334859 LRRC24Q50LG9 513 aa21.03■□□□□ 0.96
LRCH3-201ENST00000334859 SH3TC1Q8TE82 1336 aa21.03■□□□□ 0.96
LRCH3-201ENST00000334859 PTMAP06454 111 aaKnown RBP21.02■□□□□ 0.96
LRCH3-201ENST00000334859 NKX1-1Q15270 411 aaPredicted RBP21.02■□□□□ 0.96
LRCH3-201ENST00000334859 FAM173BQ6P4H8 233 aa21.02■□□□□ 0.96
LRCH3-201ENST00000334859 CARD10Q9BWT7 1032 aa21.02■□□□□ 0.96
LRCH3-201ENST00000334859 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
LRCH3-201ENST00000334859 EYA2O00167 538 aa21.02■□□□□ 0.95
LRCH3-201ENST00000334859 HCLS1P14317 486 aaPredicted RBP21.02■□□□□ 0.95
LRCH3-201ENST00000334859 FGD1P98174 961 aa21.02■□□□□ 0.95
LRCH3-201ENST00000334859 SLFNL1Q499Z3 407 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 Q6ZUG5 572 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 GPR108Q9NPR9 543 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 ZKSCAN5Q9Y2L8 839 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 SOS2Q07890 1332 aaPredicted RBP21.01■□□□□ 0.95
LRCH3-201ENST00000334859 SHANK3Q9BYB0 1731 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 TNS2Q63HR2 1409 aa21.01■□□□□ 0.95
LRCH3-201ENST00000334859 EVA1CP58658 441 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms