RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 MPHOSPH8Q99549 860 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 LSG1Q9H089 658 aaKnown RBP9.8□□□□□ -0.84
SKA2-201ENST00000330137 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.8□□□□□ -0.84
SKA2-201ENST00000330137 UGGT1Q9NYU2 1555 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 SOS1Q07889 1333 aaPredicted RBP9.79□□□□□ -0.84
SKA2-201ENST00000330137 PIK3C2BO00750 1634 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 CCDC151A5D8V7 595 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 POTEB2H3BUK9 544 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 APPP05067 770 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 TUBBP07437 444 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 GNAI3P08754 354 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 EFCAB13Q8IY85 973 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 RABGGTAQ92696 567 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 DNAJC25Q9H1X3 360 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 DONSONQ9NYP3 566 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 CEP170BQ9Y4F5 1589 aaPredicted RBP9.79□□□□□ -0.84
SKA2-201ENST00000330137 MAP2K7O14733 419 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 CORO7P57737 925 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 ST5P78524 1137 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 TRDNQ13061 729 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 NOL8Q76FK4 1167 aaKnown RBP9.79□□□□□ -0.84
SKA2-201ENST00000330137 LEO1Q8WVC0 666 aaPredicted RBP9.79□□□□□ -0.84
SKA2-201ENST00000330137 RUFY2Q8WXA3 655 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 TRERF1Q96PN7 1200 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 MED4Q9NPJ6 270 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 CFAP45Q9UL16 551 aa9.79□□□□□ -0.84
SKA2-201ENST00000330137 BECN2A8MW95 431 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 ATP8B2P98198 1209 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 ZRSR1Q15695 479 aaKnown RBP9.78□□□□□ -0.84
SKA2-201ENST00000330137 LARP1BQ659C4 914 aaKnown RBP9.78□□□□□ -0.84
SKA2-201ENST00000330137 CERS3Q8IU89 383 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 MEIS3Q99687 375 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 ZSCAN16Q9H4T2 348 aaPredicted RBP9.78□□□□□ -0.84
SKA2-201ENST00000330137 CCDC196A0A1B0GTZ2 297 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 TRIM66O15016 1216 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 POLR3GO15318 223 aaPredicted RBP9.78□□□□□ -0.84
SKA2-201ENST00000330137 MYO1BO43795 1136 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 USP8P40818 1118 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 TUBB2AQ13885 445 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 MCTP2Q6DN12 878 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
SKA2-201ENST00000330137 RILPL2Q969X0 211 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 TUBB2BQ9BVA1 445 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 PDRG1Q9NUG6 133 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 CYP46A1Q9Y6A2 500 aa9.78□□□□□ -0.84
SKA2-201ENST00000330137 PXDNLA1KZ92 1463 aa9.77□□□□□ -0.84
SKA2-201ENST00000330137 LOC102724159A0A0B4J2E5 919 aa9.77□□□□□ -0.84
SKA2-201ENST00000330137 EIF3JO75822 258 aaKnown RBP9.77□□□□□ -0.84
SKA2-201ENST00000330137 PWP2Q15269 919 aaKnown RBP9.77□□□□□ -0.84
SKA2-201ENST00000330137 CAMK4Q16566 473 aa9.77□□□□□ -0.84
SKA2-201ENST00000330137 MMS22LQ6ZRQ5 1243 aa9.77□□□□□ -0.84
SKA2-201ENST00000330137 CKAP2LQ8IYA6 745 aa9.77□□□□□ -0.84
SKA2-201ENST00000330137 FUT8Q9BYC5 575 aa9.77□□□□□ -0.84
SKA2-201ENST00000330137 GGNBP2Q9H3C7 697 aa9.77□□□□□ -0.84
SKA2-201ENST00000330137 USP42Q9H9J4 1324 aaKnown RBP9.77□□□□□ -0.85
SKA2-201ENST00000330137 ATP7BP35670 1465 aa9.77□□□□□ -0.85
SKA2-201ENST00000330137 CHGAP10645 457 aaKnown RBP9.77□□□□□ -0.85
SKA2-201ENST00000330137 SFPQP23246 707 aaKnown RBP eCLIP9.77□□□□□ -0.85
SKA2-201ENST00000330137 RSRC2Q7L4I2 434 aaKnown RBP9.77□□□□□ -0.85
SKA2-201ENST00000330137 CEP57L1Q8IYX8 460 aa9.77□□□□□ -0.85
SKA2-201ENST00000330137 CNTROBQ8N137 903 aa9.77□□□□□ -0.85
SKA2-201ENST00000330137 DDX11Q96FC9 970 aa9.77□□□□□ -0.85
SKA2-201ENST00000330137 LCMT1Q9UIC8 334 aa9.77□□□□□ -0.85
SKA2-201ENST00000330137 NCKAP5LQ9HCH0 1330 aa9.77□□□□□ -0.85
SKA2-201ENST00000330137 CHL1O00533 1208 aa9.76□□□□□ -0.85
SKA2-201ENST00000330137 ZSCAN12O43309 604 aa9.76□□□□□ -0.85
SKA2-201ENST00000330137 SMC2O95347 1197 aa9.76□□□□□ -0.85
SKA2-201ENST00000330137 TRMT1Q9NXH9 659 aaKnown RBP9.76□□□□□ -0.85
SKA2-201ENST00000330137 VPS37CA5D8V6 355 aaPredicted RBP9.76□□□□□ -0.85
SKA2-201ENST00000330137 EIF3CLB5ME19 914 aaKnown RBP9.76□□□□□ -0.85
SKA2-201ENST00000330137 PSMA5P28066 241 aa9.76□□□□□ -0.85
SKA2-201ENST00000330137 CCDC83Q8IWF9 413 aa9.76□□□□□ -0.85
SKA2-201ENST00000330137 DHX40Q8IX18 779 aaKnown RBP9.76□□□□□ -0.85
SKA2-201ENST00000330137 THEMISQ8N1K5 641 aaPredicted RBP9.76□□□□□ -0.85
SKA2-201ENST00000330137 EIF3CQ99613 913 aaKnown RBP9.76□□□□□ -0.85
SKA2-201ENST00000330137 A2ML1A8K2U0 1454 aa9.76□□□□□ -0.85
SKA2-201ENST00000330137 A0A087WUV0 522 aaPredicted RBP9.75□□□□□ -0.85
SKA2-201ENST00000330137 IL13P35225 146 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 USP5P45974 858 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 EIF5P55010 431 aaKnown RBP9.75□□□□□ -0.85
SKA2-201ENST00000330137 PHACTR3Q96KR7 559 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 EXOC6BQ9Y2D4 811 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 ZNF142P52746 1687 aaPredicted RBP9.75□□□□□ -0.85
SKA2-201ENST00000330137 NR1I2O75469 434 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 SASH3O75995 380 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 TRIM65Q6PJ69 517 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 PACS2Q86VP3 889 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 CACNA1FO60840 1977 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 SPATA31D1Q6ZQQ2 1576 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 MAP3K5Q99683 1374 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 SRGAP3O43295 1099 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 LMAN1P49257 510 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 EVCP57679 992 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 HDXQ7Z353 690 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 BICD2Q8TD16 824 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 ACBD3Q9H3P7 528 aa9.75□□□□□ -0.85
SKA2-201ENST00000330137 A1CFQ9NQ94 594 aaKnown RBP9.75□□□□□ -0.85
SKA2-201ENST00000330137 USP16Q9Y5T5 823 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms