RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 KIAA1107Q9UPP5 1409 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 RARSP54136 660 aaKnown RBP6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 FKBP4Q02790 459 aaKnown RBP eCLIP6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 SETDB1Q15047 1291 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 USP48Q86UV5 1035 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 NDUFAB1O14561 156 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 NOL3O60936 208 aaKnown RBP6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 CCDC172P0C7W6 258 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 USP5P45974 858 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 ALDH1L2Q3SY69 923 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 CRACR2BQ8N4Y2 399 aaPredicted RBP6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 TCHPQ9BT92 498 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 GDPD2Q9HCC8 539 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 CCDC141Q6ZP82 1450 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 SRGAP3O43295 1099 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 PPP1R12BO60237 982 aaPredicted RBP6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 PCK1P35558 622 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 MAP3K9P80192 1104 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 CEP128Q6ZU80 1094 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 PPFIBP2Q8ND30 876 aa6.13□□□□□ -1.43
SDR42E1-201ENST00000328945 FGFR1OPO95684 399 aaKnown RBP6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 SLC8A1P32418 973 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 EVCP57679 992 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 SEPT14Q6ZU15 432 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 POTEJP0CG39 1038 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 CACNA2D3Q8IZS8 1091 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 NACAP1Q9BZK3 213 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 CABP1Q9NZU7 370 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 ZNF445P59923 1031 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 KLHL10Q6JEL2 608 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 C9orf84Q5VXU9 1444 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 FSD2A1L4K1 749 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 WWC3Q9ULE0 1092 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 RTEL1-TNFRSF6BF6WH68 1400 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 KIF1CO43896 1103 aaKnown RBP6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 STARD3NLO95772 234 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 MPRIPQ6WCQ1 1025 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 SMC6Q96SB8 1091 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 RNF216Q9NWF9 866 aaPredicted RBP6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 RAD50Q92878 1312 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 GOLGA6CA6NDK9 693 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 BTBD11A6QL63 1104 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 PTCD1O75127 700 aaKnown RBP6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 GOLGA6DP0CG33 693 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 TTC22Q5TAA0 569 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 AACSQ86V21 672 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 GOLGA6AQ9NYA3 693 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 TACC1O75410 805 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 TMOD3Q9NYL9 352 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 PRKAR2BP31323 418 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 CEP85LQ5SZL2 805 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
SDR42E1-201ENST00000328945 RPGRIP1LQ68CZ1 1315 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 IFT140Q96RY7 1462 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 VAV2P52735 878 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 HDAC1Q13547 482 aaPredicted RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 PPP4R3AQ6IN85 833 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 LRP2BPQ9P2M1 347 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 WDR62O43379 1518 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 RAB11FIP3O75154 756 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 HOOK3Q86VS8 718 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 ZSCAN16Q9H4T2 348 aaPredicted RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 SNAPC4Q5SXM2 1469 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 MAP7Q14244 749 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 C8orf76Q96K31 380 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 C8orf37Q96NL8 207 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 TRIM4Q9C037 500 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 EPRSP07814 1512 aaKnown RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 DNA2P51530 1060 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 UBASH3AP57075 661 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 ANAPC15P60006 121 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 CCDC96Q2M329 555 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 CCDC196A0A1B0GTZ2 297 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 BIN1O00499 593 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 RHOXF2BP0C7M4 288 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 CACNA2D4Q7Z3S7 1137 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 RHOXF2Q9BQY4 288 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 RRP15Q9Y3B9 282 aaKnown RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 POLR3DP05423 398 aaPredicted RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 STMN2Q93045 179 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 TSG101Q99816 390 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 BMP2KQ9NSY1 1161 aaPredicted RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 CAMSAP2Q08AD1 1489 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 MAP4K4O95819 1239 aaPredicted RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 RRS1Q15050 365 aaKnown RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 IFI16Q16666 785 aaKnown RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 U3KPZ7 1027 aaPredicted RBP6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 ANKRD36BQ8N2N9 1353 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 NUCB1Q02818 461 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 PPP2R5AQ15172 486 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 CUL7Q14999 1698 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 C6orf229H3BNL8 230 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 F13A1P00488 732 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 SYT10Q6XYQ8 523 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
SDR42E1-201ENST00000328945 PABPN1LA6NDY0 278 aaKnown RBP6.1□□□□□ -1.43
SDR42E1-201ENST00000328945 ALDH3A1P30838 453 aa6.1□□□□□ -1.43
SDR42E1-201ENST00000328945 KANK3Q6NY19 840 aa6.1□□□□□ -1.43
SDR42E1-201ENST00000328945 AOPEPQ8N6M6 819 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms