RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
SYNGR1-203ENST00000328933 UPF3BQ9BZI7 483 aaKnown RBP17.02■□□□□ 0.32
SYNGR1-203ENST00000328933 EYA2O00167 538 aa17.02■□□□□ 0.31
SYNGR1-203ENST00000328933 KCNQ2O43526 872 aa17.02■□□□□ 0.31
SYNGR1-203ENST00000328933 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.31
SYNGR1-203ENST00000328933 KIAA2012Q0VF49 1180 aa17.02■□□□□ 0.31
SYNGR1-203ENST00000328933 TFCP2Q12800 502 aa17.02■□□□□ 0.31
SYNGR1-203ENST00000328933 CDK5RAP3Q96JB5 506 aa17.02■□□□□ 0.31
SYNGR1-203ENST00000328933 SERPINB2P05120 415 aa17.01■□□□□ 0.31
SYNGR1-203ENST00000328933 GCKRQ14397 625 aa17.01■□□□□ 0.31
SYNGR1-203ENST00000328933 SUPT20HQ8NEM7 779 aa17.01■□□□□ 0.31
SYNGR1-203ENST00000328933 IFIT3O14879 490 aaKnown RBP17.01■□□□□ 0.31
SYNGR1-203ENST00000328933 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
SYNGR1-203ENST00000328933 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
SYNGR1-203ENST00000328933 MMP10P09238 476 aa17■□□□□ 0.31
SYNGR1-203ENST00000328933 PDRG1Q9NUG6 133 aa17■□□□□ 0.31
SYNGR1-203ENST00000328933 MCM2P49736 904 aa17■□□□□ 0.31
SYNGR1-203ENST00000328933 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
SYNGR1-203ENST00000328933 MIGA1Q8NAN2 632 aa17■□□□□ 0.31
SYNGR1-203ENST00000328933 BECN2A8MW95 431 aa17■□□□□ 0.31
SYNGR1-203ENST00000328933 CASTP20810 708 aaKnown RBP17■□□□□ 0.31
SYNGR1-203ENST00000328933 VPS72Q15906 364 aa17■□□□□ 0.31
SYNGR1-203ENST00000328933 IBSPP21815 317 aaPredicted RBP16.99■□□□□ 0.31
SYNGR1-203ENST00000328933 SRP68Q9UHB9 627 aaKnown RBP16.99■□□□□ 0.31
SYNGR1-203ENST00000328933 CDKL5O76039 1030 aa16.99■□□□□ 0.31
SYNGR1-203ENST00000328933 CEBPZQ03701 1054 aaKnown RBP16.99■□□□□ 0.31
SYNGR1-203ENST00000328933 TXNRD1Q16881 649 aa16.99■□□□□ 0.31
SYNGR1-203ENST00000328933 SLC4A4Q9Y6R1 1079 aa16.99■□□□□ 0.31
SYNGR1-203ENST00000328933 ZNF526Q8TF50 670 aaPredicted RBP16.99■□□□□ 0.31
SYNGR1-203ENST00000328933 VAT1LQ9HCJ6 419 aa16.99■□□□□ 0.31
SYNGR1-203ENST00000328933 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 TNNI2P48788 182 aa16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 PRKG1Q13976 671 aa16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 HOOK1Q9UJC3 728 aaKnown RBP16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 KIDINS220Q9ULH0 1771 aa16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 KRT18P05783 430 aaKnown RBP16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 SKAP1Q86WV1 359 aa16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 ZFYP08048 801 aaPredicted RBP16.98■□□□□ 0.31
SYNGR1-203ENST00000328933 NUCB2P80303 420 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 MFSD6Q6ZSS7 791 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 H7C1D1 291 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 MAP3K15Q6ZN16 1313 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 ADAMTS13Q76LX8 1427 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 A0A1B0GUL7 405 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 PLCG2P16885 1265 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 DDX11Q96FC9 970 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 MCM9Q9NXL9 1143 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
SYNGR1-203ENST00000328933 RLBP1P12271 317 aa16.96■□□□□ 0.31
SYNGR1-203ENST00000328933 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
SYNGR1-203ENST00000328933 CEP170BQ9Y4F5 1589 aaPredicted RBP16.96■□□□□ 0.31
SYNGR1-203ENST00000328933 PDE4CQ08493 712 aa16.96■□□□□ 0.31
SYNGR1-203ENST00000328933 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
SYNGR1-203ENST00000328933 PUM3Q15397 648 aaKnown RBP16.96■□□□□ 0.31
SYNGR1-203ENST00000328933 PCDHB15Q9Y5E8 787 aa16.96■□□□□ 0.31
SYNGR1-203ENST00000328933 TXLNAP40222 546 aa16.96■□□□□ 0.3
SYNGR1-203ENST00000328933 SUCLG2Q96I99 432 aa16.96■□□□□ 0.3
SYNGR1-203ENST00000328933 SDF4Q9BRK5 362 aa16.96■□□□□ 0.3
SYNGR1-203ENST00000328933 STK38Q15208 465 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 GIGYF2Q6Y7W6 1299 aaKnown RBP16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 DENND2AQ9ULE3 1009 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 PAG1Q9NWQ8 432 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 SLC12A7Q9Y666 1083 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 LMTK2Q8IWU2 1503 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 CCDC196A0A1B0GTZ2 297 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 ZHX3Q9H4I2 956 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 TSHZ2Q9NRE2 1034 aa16.95■□□□□ 0.3
SYNGR1-203ENST00000328933 MAGEB6P1A0A0J9YX57 407 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 NEURL1BA8MQ27 555 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 BEGAINQ9BUH8 593 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 UNC13BO14795 1591 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 TSPY3P0CV98 308 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 TSPY8P0CW00 308 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 PROSER3Q2NL68 480 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 CATIPQ7Z7H3 387 aa16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 PCMTD1Q96MG8 357 aaPredicted RBP16.94■□□□□ 0.3
SYNGR1-203ENST00000328933 TPM2P07951 284 aa16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 GTF2IP78347 998 aa16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 TEX11Q8IYF3 940 aa16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 KAT14Q9H8E8 782 aa16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 BLMP54132 1417 aaPredicted RBP16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 LARP1BQ659C4 914 aaKnown RBP16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 CEP89Q96ST8 783 aa16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 PTCH1Q13635 1447 aa16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 MADDQ8WXG6 1647 aa16.93■□□□□ 0.3
SYNGR1-203ENST00000328933 DOK7Q18PE1 504 aa16.92■□□□□ 0.3
SYNGR1-203ENST00000328933 NOL7Q9UMY1 257 aaKnown RBP16.92■□□□□ 0.3
SYNGR1-203ENST00000328933 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
SYNGR1-203ENST00000328933 RPS6KA4O75676 772 aa16.92■□□□□ 0.3
SYNGR1-203ENST00000328933 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
SYNGR1-203ENST00000328933 FBXO41Q8TF61 875 aa16.92■□□□□ 0.3
SYNGR1-203ENST00000328933 PDE1AP54750 535 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms