RNA–Protein interactions for RNA: ENST00000311066.9

PRDM2-202, Transcript of PR/SET domain 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM2, Length 7,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-202ENST00000311066 TRIM5Q9C035 493 aa7.68□□□□□ -1.18
PRDM2-202ENST00000311066 TNMDQ9H2S6 317 aa7.68□□□□□ -1.18
PRDM2-202ENST00000311066 ERVK-7P63135 1459 aa7.68□□□□□ -1.18
PRDM2-202ENST00000311066 PTPRTO14522 1441 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 KRT23Q9C075 422 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 A1BGP04217 495 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 CIZ1Q9ULV3 898 aaPredicted RBP7.67□□□□□ -1.18
PRDM2-202ENST00000311066 IBSPP21815 317 aaPredicted RBP7.67□□□□□ -1.18
PRDM2-202ENST00000311066 FERMT3Q86UX7 667 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 ESR2Q92731 530 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 ZNF496Q96IT1 587 aaPredicted RBP7.67□□□□□ -1.18
PRDM2-202ENST00000311066 PDE8AO60658 829 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 LDHBP07195 334 aaKnown RBP7.67□□□□□ -1.18
PRDM2-202ENST00000311066 IARSP41252 1262 aaKnown RBP7.67□□□□□ -1.18
PRDM2-202ENST00000311066 TSPY26PQ9H489 355 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 VAT1LQ9HCJ6 419 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 MAGEB6P1A0A0J9YX57 407 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 TNNI2P48788 182 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 NEK1Q96PY6 1258 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 CCDC39Q9UFE4 941 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 LIMCH1Q9UPQ0 1083 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 HCLS1P14317 486 aaPredicted RBP7.67□□□□□ -1.18
PRDM2-202ENST00000311066 NFKBIBQ15653 356 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 CNNM2Q9H8M5 875 aa7.67□□□□□ -1.18
PRDM2-202ENST00000311066 PHKG2P15735 406 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 PAF1Q8N7H5 531 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 SUPT20HQ8NEM7 779 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 GGA1Q9UJY5 639 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 USP16Q9Y5T5 823 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 GJA3Q9Y6H8 435 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 TRAK2O60296 914 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 BAG4O95429 457 aaKnown RBP7.66□□□□□ -1.18
PRDM2-202ENST00000311066 CCDC192P0DO97 292 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 PAG1Q9NWQ8 432 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 DENND2AQ9ULE3 1009 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 CHL1O00533 1208 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 ITGA6P23229 1130 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 TFCP2Q12800 502 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 KIAA0232Q92628 1395 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 GNAT2P19087 354 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 PDE1AP54750 535 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 MICU3Q86XE3 530 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 ZNHIT6Q9NWK9 470 aaKnown RBP7.66□□□□□ -1.18
PRDM2-202ENST00000311066 ROBO2Q9HCK4 1378 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 EYA2O00167 538 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 WTAPQ15007 396 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 TTLL5Q6EMB2 1281 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 TTC37Q6PGP7 1564 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 SERPINC1P01008 464 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 MCM5P33992 734 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 METAP2P50579 478 aaKnown RBP eCLIP7.66□□□□□ -1.18
PRDM2-202ENST00000311066 DPP8Q6V1X1 898 aaPredicted RBP7.66□□□□□ -1.18
PRDM2-202ENST00000311066 LARGE2Q8N3Y3 721 aa7.66□□□□□ -1.18
PRDM2-202ENST00000311066 TTC41PQ6P2S7 1318 aa7.65□□□□□ -1.18
PRDM2-202ENST00000311066 RNF113AO15541 343 aaKnown RBP7.65□□□□□ -1.18
PRDM2-202ENST00000311066 EIF6P56537 245 aaKnown RBP7.65□□□□□ -1.18
PRDM2-202ENST00000311066 MCMDC2Q4G0Z9 681 aa7.65□□□□□ -1.18
PRDM2-202ENST00000311066 FAM196AQ6ZSG2 479 aa7.65□□□□□ -1.18
PRDM2-202ENST00000311066 CCT2P78371 535 aaKnown RBP7.65□□□□□ -1.18
PRDM2-202ENST00000311066 BICC1Q9H694 974 aaKnown RBP7.65□□□□□ -1.18
PRDM2-202ENST00000311066 CCDC173Q0VFZ6 552 aa7.65□□□□□ -1.18
PRDM2-202ENST00000311066 TMTC2Q8N394 836 aa7.65□□□□□ -1.18
PRDM2-202ENST00000311066 CARD10Q9BWT7 1032 aa7.65□□□□□ -1.18
PRDM2-202ENST00000311066 INSRP06213 1382 aa7.65□□□□□ -1.18
PRDM2-202ENST00000311066 SBNO2Q9Y2G9 1366 aa7.65□□□□□ -1.18
PRDM2-202ENST00000311066 HIBADHP31937 336 aaKnown RBP7.65□□□□□ -1.19
PRDM2-202ENST00000311066 NUCB1Q02818 461 aa7.65□□□□□ -1.19
PRDM2-202ENST00000311066 PODXL2Q9NZ53 605 aa7.65□□□□□ -1.19
PRDM2-202ENST00000311066 HECW2Q9P2P5 1572 aa7.65□□□□□ -1.19
PRDM2-202ENST00000311066 RDXP35241 583 aaKnown RBP7.65□□□□□ -1.19
PRDM2-202ENST00000311066 PDE6BP35913 854 aa7.65□□□□□ -1.19
PRDM2-202ENST00000311066 TBC1D9Q6ZT07 1266 aa7.65□□□□□ -1.19
PRDM2-202ENST00000311066 PPP1R12BO60237 982 aaPredicted RBP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 CEP85Q6P2H3 762 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 MCM9Q9NXL9 1143 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 ZCCHC11Q5TAX3 1644 aaKnown RBP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 ERCC6L2Q5T890 1561 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 G2E3Q7L622 706 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 TTC6Q86TZ1 520 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 NUP62CLQ9H1M0 184 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 MAST3O60307 1309 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 MYO5CQ9NQX4 1742 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 GNAQP50148 359 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 ARHGEF25Q86VW2 580 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 ANKRD62A6NC57 917 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 TRIM21P19474 475 aaKnown RBP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 EIF4A1P60842 406 aaKnown RBP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 CCDC144CPQ8IYA2 1237 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 SCAND2PQ9GZW5 306 aaPredicted RBP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 ORC3Q9UBD5 711 aaPredicted RBP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 CHD1O14646 1710 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 GUCY1B3Q02153 619 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 IGHDP01880 384 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 ALDH1B1P30837 517 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 DHX8Q14562 1220 aaKnown RBP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 IFIT1BQ5T764 474 aaKnown RBP7.64□□□□□ -1.19
PRDM2-202ENST00000311066 KRT27Q7Z3Y8 459 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 PPFIBP1Q86W92 1011 aa7.64□□□□□ -1.19
PRDM2-202ENST00000311066 MIGA1Q8NAN2 632 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms