RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 ATP6V1DQ9Y5K8 247 aa18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 BLOC1S2Q6QNY1 142 aa18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 TCEANC2Q96MN5 208 aa18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 ZNF609O15014 1411 aa18.17■□□□□ 0.5
SPIRE1-201ENST00000309836 A0A087WZG4 1122 aa18.17■□□□□ 0.5
SPIRE1-201ENST00000309836 TOB2Q14106 344 aaPredicted RBP18.17■□□□□ 0.5
SPIRE1-201ENST00000309836 TSGA10IPQ3SY00 556 aa18.17■□□□□ 0.5
SPIRE1-201ENST00000309836 DBNDD2Q9BQY9 259 aa18.17■□□□□ 0.5
SPIRE1-201ENST00000309836 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
SPIRE1-201ENST00000309836 RFX7Q2KHR2 1363 aa18.17■□□□□ 0.5
SPIRE1-201ENST00000309836 TJP1Q07157 1748 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 NUP188Q5SRE5 1749 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 VPS37CA5D8V6 355 aaPredicted RBP18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 NBPF26B4DH59 902 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 TPRNQ4KMQ1 711 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 NBPF14Q5TI25 921 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 RNF20Q5VTR2 975 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 NBPF10Q6P3W6 841 aaKnown RBP18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 NBPF15Q8N660 670 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 OFD1O75665 1012 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 CHGBP05060 677 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 HMG20BQ9P0W2 317 aa18.16■□□□□ 0.5
SPIRE1-201ENST00000309836 UBR2Q8IWV8 1755 aa18.15■□□□□ 0.5
SPIRE1-201ENST00000309836 CCDC39Q9UFE4 941 aa18.15■□□□□ 0.5
SPIRE1-201ENST00000309836 ZKSCAN5Q9Y2L8 839 aa18.15■□□□□ 0.5
SPIRE1-201ENST00000309836 ZNF500O60304 480 aaPredicted RBP18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 FOXO4P98177 505 aa18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 ANKRD1Q15327 319 aa18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 HAUS7Q99871 368 aa18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 H7C1W4 665 aa18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 CDC37L1Q7L3B6 337 aa18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 CADPS2Q86UW7 1296 aa18.14■□□□□ 0.49
SPIRE1-201ENST00000309836 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
SPIRE1-201ENST00000309836 PAPPAQ13219 1627 aa18.13■□□□□ 0.49
SPIRE1-201ENST00000309836 LETM1O95202 739 aaPredicted RBP18.13■□□□□ 0.49
SPIRE1-201ENST00000309836 CSPP1Q1MSJ5 1256 aa18.13■□□□□ 0.49
SPIRE1-201ENST00000309836 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
SPIRE1-201ENST00000309836 LARP1BQ659C4 914 aaKnown RBP18.13■□□□□ 0.49
SPIRE1-201ENST00000309836 TTLL7Q6ZT98 887 aa18.13■□□□□ 0.49
SPIRE1-201ENST00000309836 DNAJC2Q99543 621 aaKnown RBP18.13■□□□□ 0.49
SPIRE1-201ENST00000309836 FAM184AQ8NB25 1140 aa18.12■□□□□ 0.49
SPIRE1-201ENST00000309836 SEC62Q99442 399 aaKnown RBP18.12■□□□□ 0.49
SPIRE1-201ENST00000309836 FUCA2Q9BTY2 467 aa18.12■□□□□ 0.49
SPIRE1-201ENST00000309836 ATG9AQ7Z3C6 839 aa18.12■□□□□ 0.49
SPIRE1-201ENST00000309836 MCM5P33992 734 aa18.11■□□□□ 0.49
SPIRE1-201ENST00000309836 HCLS1P14317 486 aaPredicted RBP18.1■□□□□ 0.49
SPIRE1-201ENST00000309836 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.1■□□□□ 0.49
SPIRE1-201ENST00000309836 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
SPIRE1-201ENST00000309836 TTC6Q86TZ1 520 aa18.1■□□□□ 0.49
SPIRE1-201ENST00000309836 FERMT3Q86UX7 667 aa18.1■□□□□ 0.49
SPIRE1-201ENST00000309836 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
SPIRE1-201ENST00000309836 XIRP1Q702N8 1843 aaKnown RBP18.1■□□□□ 0.49
SPIRE1-201ENST00000309836 STK3Q13188 491 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 KRT32Q14532 448 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 GIMAP6Q6P9H5 292 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 WDR17Q8IZU2 1322 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 PDCP20941 246 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 MCMDC2Q4G0Z9 681 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 FAM173BQ6P4H8 233 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 KBTBD3Q8NAB2 608 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 CHMP3Q9Y3E7 222 aa18.09■□□□□ 0.49
SPIRE1-201ENST00000309836 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
SPIRE1-201ENST00000309836 SHANK3Q9BYB0 1731 aa18.08■□□□□ 0.49
SPIRE1-201ENST00000309836 A1BGP04217 495 aa18.08■□□□□ 0.49
SPIRE1-201ENST00000309836 TPM2P07951 284 aa18.08■□□□□ 0.49
SPIRE1-201ENST00000309836 NEK1Q96PY6 1258 aa18.08■□□□□ 0.49
SPIRE1-201ENST00000309836 CCDC9Q9Y3X0 531 aaKnown RBP18.08■□□□□ 0.49
SPIRE1-201ENST00000309836 SH3TC1Q8TE82 1336 aa18.08■□□□□ 0.48
SPIRE1-201ENST00000309836 CYP21A2P08686 494 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 PDIA4P13667 645 aaKnown RBP18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 KRT85P78386 507 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 GTF3C6Q969F1 213 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 USP25Q9UHP3 1055 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 ERVV-2B6SEH9 535 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 JAK2O60674 1132 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 SLFNL1Q499Z3 407 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 STOX1Q6ZVD7 989 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 GPR108Q9NPR9 543 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 ELP1O95163 1332 aa18.07■□□□□ 0.48
SPIRE1-201ENST00000309836 TNS2Q63HR2 1409 aa18.06■□□□□ 0.48
SPIRE1-201ENST00000309836 COL5A2P05997 1499 aaPredicted RBP18.06■□□□□ 0.48
SPIRE1-201ENST00000309836 LAMA4Q16363 1823 aa18.06■□□□□ 0.48
SPIRE1-201ENST00000309836 PTMAP06454 111 aaKnown RBP18.06■□□□□ 0.48
SPIRE1-201ENST00000309836 Q6ZUG5 572 aa18.06■□□□□ 0.48
SPIRE1-201ENST00000309836 BRINP3Q76B58 766 aa18.06■□□□□ 0.48
SPIRE1-201ENST00000309836 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.06■□□□□ 0.48
SPIRE1-201ENST00000309836 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
SPIRE1-201ENST00000309836 TOM1L2Q6ZVM7 507 aa18.05■□□□□ 0.48
SPIRE1-201ENST00000309836 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
SPIRE1-201ENST00000309836 ZBTB3Q9H5J0 574 aa18.05■□□□□ 0.48
SPIRE1-201ENST00000309836 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms