RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 EIF3JO75822 258 aaKnown RBP10.84□□□□□ -0.67
XCR1-201ENST00000309285 CHMLP26374 656 aa10.84□□□□□ -0.67
XCR1-201ENST00000309285 PSMA5P28066 241 aa10.84□□□□□ -0.67
XCR1-201ENST00000309285 SF3B2Q13435 895 aaKnown RBP10.84□□□□□ -0.67
XCR1-201ENST00000309285 PTPN14Q15678 1187 aa10.84□□□□□ -0.67
XCR1-201ENST00000309285 BICDL1Q6ZP65 573 aa10.84□□□□□ -0.67
XCR1-201ENST00000309285 NPHP4O75161 1426 aaPredicted RBP10.83□□□□□ -0.67
XCR1-201ENST00000309285 ZKSCAN5Q9Y2L8 839 aa10.83□□□□□ -0.68
XCR1-201ENST00000309285 ZCRB1Q8TBF4 217 aaKnown RBP10.83□□□□□ -0.68
XCR1-201ENST00000309285 DCAF8L1A6NGE4 600 aa10.83□□□□□ -0.68
XCR1-201ENST00000309285 DCAF5Q96JK2 942 aa10.83□□□□□ -0.68
XCR1-201ENST00000309285 NAT10Q9H0A0 1025 aaKnown RBP10.83□□□□□ -0.68
XCR1-201ENST00000309285 TMOD3Q9NYL9 352 aa10.83□□□□□ -0.68
XCR1-201ENST00000309285 MNAT1P51948 309 aa10.83□□□□□ -0.68
XCR1-201ENST00000309285 SART3Q15020 963 aaKnown RBP10.83□□□□□ -0.68
XCR1-201ENST00000309285 ZNF496Q96IT1 587 aaPredicted RBP10.83□□□□□ -0.68
XCR1-201ENST00000309285 TMX3Q96JJ7 454 aa10.83□□□□□ -0.68
XCR1-201ENST00000309285 CCDC57Q2TAC2 916 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 BAG4O95429 457 aaKnown RBP10.82□□□□□ -0.68
XCR1-201ENST00000309285 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
XCR1-201ENST00000309285 LMAN1P49257 510 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 FAM193AP78312 1265 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 NOLC1Q14978 699 aaKnown RBP eCLIP10.82□□□□□ -0.68
XCR1-201ENST00000309285 ODF2Q5BJF6 829 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 BRMS1Q9HCU9 246 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 PDRG1Q9NUG6 133 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 TMEM94Q12767 1356 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 XBP1P17861 261 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 TMEM132AQ24JP5 1023 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 PROSER3Q2NL68 480 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 ZGPATQ8N5A5 531 aaKnown RBP10.82□□□□□ -0.68
XCR1-201ENST00000309285 CAGE1Q8TC20 777 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 CEP126Q9P2H0 1117 aa10.82□□□□□ -0.68
XCR1-201ENST00000309285 BICC1Q9H694 974 aaKnown RBP10.81□□□□□ -0.68
XCR1-201ENST00000309285 PRAMEF22A3QJZ6 481 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 BLOC1S2Q6QNY1 142 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 SSH3Q8TE77 659 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 EVI5LQ96CN4 794 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 SLC52A2Q9HAB3 445 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 AXIN2Q9Y2T1 843 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 ERLIN1O75477 346 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 RBM5P52756 815 aaKnown RBP eCLIP10.81□□□□□ -0.68
XCR1-201ENST00000309285 FKBP4Q02790 459 aaKnown RBP eCLIP10.81□□□□□ -0.68
XCR1-201ENST00000309285 STK3Q13188 491 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 C10orf67Q8IYJ2 551 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 KLHDC4Q8TBB5 520 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 MPHOSPH8Q99549 860 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 TNMDQ9H2S6 317 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 WDR33Q9C0J8 1336 aaKnown RBP10.81□□□□□ -0.68
XCR1-201ENST00000309285 BEND3Q5T5X7 828 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 KIF18AQ8NI77 898 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 SHPRHQ149N8 1683 aa10.81□□□□□ -0.68
XCR1-201ENST00000309285 CCP110O43303 1012 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 EPS15P42566 896 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 CD2BP2O95400 341 aaKnown RBP10.8□□□□□ -0.68
XCR1-201ENST00000309285 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 PAF1Q8N7H5 531 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 TRMT1Q9NXH9 659 aaKnown RBP10.8□□□□□ -0.68
XCR1-201ENST00000309285 ADCY5O95622 1261 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 RAB3GAP1Q15042 981 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 CCDC158Q5M9N0 1113 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 TTC39AQ5SRH9 613 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 LMBR1LQ6UX01 489 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.8□□□□□ -0.68
XCR1-201ENST00000309285 CRB1P82279 1406 aa10.8□□□□□ -0.68
XCR1-201ENST00000309285 STARD3NLO95772 234 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 CCDC83Q8IWF9 413 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 ANTXR1Q9H6X2 564 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 ERBB3P21860 1342 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 BMS1Q14692 1282 aaKnown RBP10.79□□□□□ -0.68
XCR1-201ENST00000309285 KLHL40Q2TBA0 621 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 TMX1Q9H3N1 280 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 USP16Q9Y5T5 823 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 KDRP35968 1356 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.79□□□□□ -0.68
XCR1-201ENST00000309285 REREQ9P2R6 1566 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 KINO60870 393 aaKnown RBP10.79□□□□□ -0.68
XCR1-201ENST00000309285 ANAPC15P60006 121 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 ZSCAN23Q3MJ62 389 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 CERS3Q8IU89 383 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 ADGRB2O60241 1585 aa10.79□□□□□ -0.68
XCR1-201ENST00000309285 ZSCAN29Q8IWY8 852 aaPredicted RBP10.78□□□□□ -0.68
XCR1-201ENST00000309285 SUCLG2Q96I99 432 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 TTC12Q9H892 705 aaPredicted RBP10.78□□□□□ -0.68
XCR1-201ENST00000309285 LIMCH1Q9UPQ0 1083 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 ZHX3Q9H4I2 956 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 CWC25Q9NXE8 425 aaPredicted RBP10.78□□□□□ -0.68
XCR1-201ENST00000309285 IBTKQ9P2D0 1353 aaPredicted RBP10.78□□□□□ -0.68
XCR1-201ENST00000309285 PHKG2P15735 406 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 GPTP24298 496 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 GDPD2Q9HCC8 539 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.78□□□□□ -0.68
XCR1-201ENST00000309285 V9GYY5 206 aaPredicted RBP10.78□□□□□ -0.68
XCR1-201ENST00000309285 OLFM4Q6UX06 510 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 NUP133Q8WUM0 1156 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 BCCIPQ9P287 314 aaKnown RBP eCLIP10.78□□□□□ -0.68
XCR1-201ENST00000309285 ADGRL3Q9HAR2 1447 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 ADAMTS2O95450 1211 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 IL2RBP14784 551 aa10.78□□□□□ -0.68
XCR1-201ENST00000309285 LARP1BQ659C4 914 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms