RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 ME1P48163 572 aa16.94■□□□□ 0.3
SCUBE2-201ENST00000309263 PROSER2Q86WR7 435 aaPredicted RBP16.94■□□□□ 0.3
SCUBE2-201ENST00000309263 SDF4Q9BRK5 362 aa16.94■□□□□ 0.3
SCUBE2-201ENST00000309263 FLT4P35916 1363 aa16.94■□□□□ 0.3
SCUBE2-201ENST00000309263 ISM2Q6H9L7 571 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 ELF2Q15723 593 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 BEND3Q5T5X7 828 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 CCDC73Q6ZRK6 1079 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 EAF2Q96CJ1 260 aaPredicted RBP16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 OGFRQ9NZT2 677 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 BIN1O00499 593 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 POLA2Q14181 598 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 C11orf57Q6ZUT1 292 aaPredicted RBP16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 ANKRD7Q92527 254 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 PGBD1Q96JS3 809 aa16.93■□□□□ 0.3
SCUBE2-201ENST00000309263 PRAMEF22A3QJZ6 481 aa16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 SMC2O95347 1197 aa16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 MYL6BP14649 208 aa16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 KINO60870 393 aaKnown RBP16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 KIF20AO95235 890 aa16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 PROSER3Q2NL68 480 aa16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 CHST3Q7LGC8 479 aa16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 CLSTN2Q9H4D0 955 aa16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 CDK11BP21127 795 aaKnown RBP16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 CCAR1Q8IX12 1150 aaKnown RBP16.92■□□□□ 0.3
SCUBE2-201ENST00000309263 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 HOMER1Q86YM7 354 aa16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 HTATSF1O43719 755 aaKnown RBP16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 FAM177A1Q8N128 213 aaPredicted RBP16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 SEC62Q99442 399 aaKnown RBP16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 SF3A1Q15459 793 aaKnown RBP16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 Q6ZUG5 572 aa16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 ST7Q9NRC1 585 aa16.91■□□□□ 0.3
SCUBE2-201ENST00000309263 HOXC9P31274 260 aa16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 ANKRD1Q15327 319 aa16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 RAB11FIP4Q86YS3 637 aa16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 AOPEPQ8N6M6 819 aa16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 FEZ1Q99689 392 aa16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 PAXBP1Q9Y5B6 917 aa16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 RPS6KB1P23443 525 aa16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 LRRC59Q96AG4 307 aaKnown RBP16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 BICC1Q9H694 974 aaKnown RBP16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 CTNNA3Q9UI47 895 aa16.9■□□□□ 0.3
SCUBE2-201ENST00000309263 MAP3K5Q99683 1374 aa16.89■□□□□ 0.3
SCUBE2-201ENST00000309263 CTIFO43310 598 aaKnown RBP16.89■□□□□ 0.29
SCUBE2-201ENST00000309263 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
SCUBE2-201ENST00000309263 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.29
SCUBE2-201ENST00000309263 NCOA5Q9HCD5 579 aaKnown RBP16.89■□□□□ 0.29
SCUBE2-201ENST00000309263 DDX46Q7L014 1031 aaKnown RBP16.88■□□□□ 0.29
SCUBE2-201ENST00000309263 MAP4K1Q92918 833 aa16.88■□□□□ 0.29
SCUBE2-201ENST00000309263 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
SCUBE2-201ENST00000309263 ARHGEF10O15013 1369 aa16.88■□□□□ 0.29
SCUBE2-201ENST00000309263 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
SCUBE2-201ENST00000309263 NEK1Q96PY6 1258 aa16.88■□□□□ 0.29
SCUBE2-201ENST00000309263 TM6SF1Q9BZW5 370 aa16.88■□□□□ 0.29
SCUBE2-201ENST00000309263 TMX1Q9H3N1 280 aa16.88■□□□□ 0.29
SCUBE2-201ENST00000309263 EIF4A1P60842 406 aaKnown RBP16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 TOB2Q14106 344 aaPredicted RBP16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 PTPN21Q16825 1174 aa16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 BBXQ8WY36 941 aaPredicted RBP16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 GTF3C6Q969F1 213 aa16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 FSIP1Q8NA03 581 aa16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 SUCLG2Q96I99 432 aa16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 CFAP45Q9UL16 551 aa16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 NEUROD6Q96NK8 337 aa16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
SCUBE2-201ENST00000309263 VGLL3A8MV65 326 aa16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 PLA2G4DQ86XP0 818 aa16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 KIF18AQ8NI77 898 aa16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 EPB41L2O43491 1005 aaKnown RBP16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 SASH1O94885 1247 aa16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 TDRD7Q8NHU6 1098 aaKnown RBP16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 POLR3DP05423 398 aaPredicted RBP16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 KMT5BQ4FZB7 885 aa16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 KRT222Q8N1A0 295 aa16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 USP6P35125 1406 aa16.86■□□□□ 0.29
SCUBE2-201ENST00000309263 A0A1B0GVL5 298 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 PLEKHG3A1L390 1219 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 APOBRQ0VD83 1088 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 DBF4Q9UBU7 674 aaPredicted RBP16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 HIP1O00291 1037 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 C1orf141Q5JVX7 400 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 SYT10Q6XYQ8 523 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 TMC6Q7Z403 805 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 STX1AQ16623 288 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 ERCC6LQ2NKX8 1250 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 HSP90AA4PQ58FG1 418 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 FBXO38Q6PIJ6 1188 aa16.85■□□□□ 0.29
SCUBE2-201ENST00000309263 POLR3GO15318 223 aaPredicted RBP16.84■□□□□ 0.29
SCUBE2-201ENST00000309263 CEP57L1Q8IYX8 460 aa16.84■□□□□ 0.29
SCUBE2-201ENST00000309263 USP28Q96RU2 1077 aa16.84■□□□□ 0.29
SCUBE2-201ENST00000309263 ELP1O95163 1332 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms