RNA–Protein interactions for RNA: ENST00000308208.9

CCDC63-201, Transcript of coiled-coil domain containing 63, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC63, Length 1,993 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63-201ENST00000308208 GREM2Q9H772 168 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 COL4A1P02462 1669 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 DPEP1P16444 411 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 FAM161AQ3B820 660 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 ZNF622Q969S3 477 aaKnown RBP eCLIP25.55■■□□□ 1.68
CCDC63-201ENST00000308208 COL11A2P13942 1736 aaPredicted RBP25.55■■□□□ 1.68
CCDC63-201ENST00000308208 KLHDC4Q8TBB5 520 aa25.55■■□□□ 1.68
CCDC63-201ENST00000308208 CACNA1SQ13698 1873 aa25.54■■□□□ 1.68
CCDC63-201ENST00000308208 PDE6BP35913 854 aa25.54■■□□□ 1.68
CCDC63-201ENST00000308208 PLA2G12BQ9BX93 195 aa25.54■■□□□ 1.68
CCDC63-201ENST00000308208 ZNF594Q96JF6 807 aaPredicted RBP25.53■■□□□ 1.68
CCDC63-201ENST00000308208 KIF13BQ9NQT8 1826 aa25.53■■□□□ 1.68
CCDC63-201ENST00000308208 PNMA6EA0A0J9YXQ4 647 aa25.53■■□□□ 1.68
CCDC63-201ENST00000308208 SRGNP10124 158 aa25.53■■□□□ 1.68
CCDC63-201ENST00000308208 H0YIN7 160 aa25.52■■□□□ 1.68
CCDC63-201ENST00000308208 KCNA3P22001 575 aa25.52■■□□□ 1.68
CCDC63-201ENST00000308208 SYT17Q9BSW7 474 aa25.52■■□□□ 1.68
CCDC63-201ENST00000308208 CSF1RP07333 972 aa25.51■■□□□ 1.67
CCDC63-201ENST00000308208 CRY2Q49AN0 593 aa25.51■■□□□ 1.67
CCDC63-201ENST00000308208 RPGRQ92834 1020 aaKnown RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 ZNF219Q9P2Y4 722 aaPredicted RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 PCDHB15Q9Y5E8 787 aa25.51■■□□□ 1.67
CCDC63-201ENST00000308208 KLRG2A4D1S0 409 aaPredicted RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 SF3B3Q15393 1217 aaKnown RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 CELF1Q92879 486 aaKnown RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 ITGA6P23229 1130 aa25.5■■□□□ 1.67
CCDC63-201ENST00000308208 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
CCDC63-201ENST00000308208 CCDC152Q4G0S7 254 aa25.49■■□□□ 1.67
CCDC63-201ENST00000308208 SRGAP3O43295 1099 aa25.49■■□□□ 1.67
CCDC63-201ENST00000308208 RABL6Q3YEC7 729 aaPredicted RBP25.49■■□□□ 1.67
CCDC63-201ENST00000308208 OLFM4Q6UX06 510 aa25.49■■□□□ 1.67
CCDC63-201ENST00000308208 SIRT2Q8IXJ6 389 aa25.49■■□□□ 1.67
CCDC63-201ENST00000308208 SPEF2Q9C093 1822 aa25.48■■□□□ 1.67
CCDC63-201ENST00000308208 CEP85Q6P2H3 762 aa25.48■■□□□ 1.67
CCDC63-201ENST00000308208 PA2G4Q9UQ80 394 aaKnown RBP25.48■■□□□ 1.67
CCDC63-201ENST00000308208 KIAA1551Q9HCM1 1747 aa25.48■■□□□ 1.67
CCDC63-201ENST00000308208 DDX46Q7L014 1031 aaKnown RBP25.47■■□□□ 1.67
CCDC63-201ENST00000308208 SLX4Q8IY92 1834 aa25.47■■□□□ 1.67
CCDC63-201ENST00000308208 MASTLQ96GX5 879 aa25.47■■□□□ 1.67
CCDC63-201ENST00000308208 NEFLP07196 543 aa25.46■■□□□ 1.67
CCDC63-201ENST00000308208 TGFB2P61812 414 aa25.46■■□□□ 1.67
CCDC63-201ENST00000308208 IFIT5Q13325 482 aaKnown RBP25.46■■□□□ 1.67
CCDC63-201ENST00000308208 HSP90B1P14625 803 aaKnown RBP25.45■■□□□ 1.67
CCDC63-201ENST00000308208 NPR1P16066 1061 aa25.45■■□□□ 1.67
CCDC63-201ENST00000308208 CCDC57Q2TAC2 916 aa25.45■■□□□ 1.67
CCDC63-201ENST00000308208 SIL1Q9H173 461 aa25.45■■□□□ 1.67
CCDC63-201ENST00000308208 ATP8B2P98198 1209 aa25.45■■□□□ 1.66
CCDC63-201ENST00000308208 PUS3Q9BZE2 481 aaKnown RBP25.45■■□□□ 1.66
CCDC63-201ENST00000308208 RIC1Q4ADV7 1423 aa25.44■■□□□ 1.66
CCDC63-201ENST00000308208 RBM17Q96I25 401 aaKnown RBP25.44■■□□□ 1.66
CCDC63-201ENST00000308208 RFX5P48382 616 aaPredicted RBP25.44■■□□□ 1.66
CCDC63-201ENST00000308208 ANKRD18BA2A2Z9 1011 aa25.43■■□□□ 1.66
CCDC63-201ENST00000308208 HOXA10P31260 410 aaPredicted RBP25.43■■□□□ 1.66
CCDC63-201ENST00000308208 BCL11AQ9H165 835 aa25.42■■□□□ 1.66
CCDC63-201ENST00000308208 CHMP4BQ9H444 224 aaKnown RBP25.42■■□□□ 1.66
CCDC63-201ENST00000308208 HDAC5Q9UQL6 1122 aa25.42■■□□□ 1.66
CCDC63-201ENST00000308208 LRP5O75197 1615 aa25.42■■□□□ 1.66
CCDC63-201ENST00000308208 TAF7LQ5H9L4 462 aa25.42■■□□□ 1.66
CCDC63-201ENST00000308208 PRPF40BQ6NWY9 871 aaKnown RBP25.42■■□□□ 1.66
CCDC63-201ENST00000308208 RPS8P62241 208 aaKnown RBP25.41■■□□□ 1.66
CCDC63-201ENST00000308208 PTPN12Q05209 780 aaKnown RBP25.41■■□□□ 1.66
CCDC63-201ENST00000308208 GRAPQ13588 217 aa25.41■■□□□ 1.66
CCDC63-201ENST00000308208 LRRC24Q50LG9 513 aa25.41■■□□□ 1.66
CCDC63-201ENST00000308208 PELP1Q8IZL8 1130 aaKnown RBP25.41■■□□□ 1.66
CCDC63-201ENST00000308208 GRAPLQ8TC17 118 aaPredicted RBP25.41■■□□□ 1.66
CCDC63-201ENST00000308208 PIM2Q9P1W9 311 aa25.41■■□□□ 1.66
CCDC63-201ENST00000308208 BCS1LQ9Y276 419 aa25.41■■□□□ 1.66
CCDC63-201ENST00000308208 BRCA1P38398 1863 aaKnown RBP25.4■■□□□ 1.66
CCDC63-201ENST00000308208 DLEC1Q9Y238 1755 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 MTX1Q13505 466 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 STYK1Q6J9G0 422 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 ANKRD18AQ8IVF6 992 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 TTLL6Q8N841 843 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 WTIPA6NIX2 430 aaPredicted RBP25.39■■□□□ 1.66
CCDC63-201ENST00000308208 C21orf2O43822 256 aa25.39■■□□□ 1.66
CCDC63-201ENST00000308208 CRAMP1Q96RY5 1269 aa25.39■■□□□ 1.66
CCDC63-201ENST00000308208 APBB1O00213 710 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 ALDH1B1P30837 517 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 LDHAL6AQ6ZMR3 332 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 HELBQ8NG08 1087 aaPredicted RBP25.38■■□□□ 1.65
CCDC63-201ENST00000308208 SSH3Q8TE77 659 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 POLA2Q14181 598 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 RPAP2Q8IXW5 612 aaPredicted RBP25.38■■□□□ 1.65
CCDC63-201ENST00000308208 CDC5LQ99459 802 aaKnown RBP25.38■■□□□ 1.65
CCDC63-201ENST00000308208 MPHOSPH8Q99549 860 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 EXOC6BQ9Y2D4 811 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 CNKSR1Q969H4 720 aa25.37■■□□□ 1.65
CCDC63-201ENST00000308208 SNAP23O00161 211 aa25.36■■□□□ 1.65
CCDC63-201ENST00000308208 PPEF1O14829 653 aaPredicted RBP25.36■■□□□ 1.65
CCDC63-201ENST00000308208 IGHDP01880 384 aa25.36■■□□□ 1.65
CCDC63-201ENST00000308208 IGHMBP2P38935 993 aaKnown RBP25.36■■□□□ 1.65
CCDC63-201ENST00000308208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.36■■□□□ 1.65
CCDC63-201ENST00000308208 DALRD3Q5D0E6 543 aaKnown RBP25.36■■□□□ 1.65
CCDC63-201ENST00000308208 CNNM1Q9NRU3 951 aa25.36■■□□□ 1.65
CCDC63-201ENST00000308208 SURF6O75683 361 aaKnown RBP25.35■■□□□ 1.65
CCDC63-201ENST00000308208 RTL9Q8NET4 1388 aa25.35■■□□□ 1.65
CCDC63-201ENST00000308208 TAF5LO75529 589 aa25.35■■□□□ 1.65
CCDC63-201ENST00000308208 PDZRN3Q9UPQ7 1066 aa25.34■■□□□ 1.65
CCDC63-201ENST00000308208 BBOX1O75936 387 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms