RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
SCG2-201ENST00000305409 TAF7LQ5H9L4 462 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
SCG2-201ENST00000305409 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 TRMT112Q9UI30 125 aaKnown RBP13.74□□□□□ -0.21
SCG2-201ENST00000305409 RBM8AQ9Y5S9 174 aaKnown RBP13.74□□□□□ -0.21
SCG2-201ENST00000305409 ITGB4P16144 1822 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 CCDC171Q6TFL3 1326 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 ADORA1P30542 326 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 ITPK1Q13572 414 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
SCG2-201ENST00000305409 TCEANC2Q96MN5 208 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 JAKMIP1Q96N16 626 aaKnown RBP13.74□□□□□ -0.21
SCG2-201ENST00000305409 GREM2Q9H772 168 aa13.74□□□□□ -0.21
SCG2-201ENST00000305409 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
SCG2-201ENST00000305409 PCCAP05165 728 aaPredicted RBP13.73□□□□□ -0.21
SCG2-201ENST00000305409 IL15P40933 162 aaPredicted RBP13.73□□□□□ -0.21
SCG2-201ENST00000305409 ZDHHC9Q9Y397 364 aa13.73□□□□□ -0.21
SCG2-201ENST00000305409 COL15A1P39059 1388 aa13.73□□□□□ -0.21
SCG2-201ENST00000305409 PHLPP1O60346 1717 aa13.73□□□□□ -0.21
SCG2-201ENST00000305409 LOC102724428A0A0B4J2F2 783 aa13.73□□□□□ -0.21
SCG2-201ENST00000305409 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
SCG2-201ENST00000305409 AK2P54819 239 aa13.73□□□□□ -0.21
SCG2-201ENST00000305409 SIK1P57059 783 aa13.73□□□□□ -0.21
SCG2-201ENST00000305409 UBN2Q6ZU65 1347 aa13.72□□□□□ -0.21
SCG2-201ENST00000305409 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
SCG2-201ENST00000305409 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
SCG2-201ENST00000305409 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
SCG2-201ENST00000305409 IFIT5Q13325 482 aaKnown RBP13.72□□□□□ -0.21
SCG2-201ENST00000305409 CREB3L3Q68CJ9 461 aa13.72□□□□□ -0.21
SCG2-201ENST00000305409 GBP4Q96PP9 640 aa13.72□□□□□ -0.21
SCG2-201ENST00000305409 CEP126Q9P2H0 1117 aa13.72□□□□□ -0.21
SCG2-201ENST00000305409 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.21
SCG2-201ENST00000305409 BAG4O95429 457 aaKnown RBP13.71□□□□□ -0.21
SCG2-201ENST00000305409 ITGA6P23229 1130 aa13.71□□□□□ -0.21
SCG2-201ENST00000305409 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.21
SCG2-201ENST00000305409 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
SCG2-201ENST00000305409 MCTP1Q6DN14 999 aa13.71□□□□□ -0.21
SCG2-201ENST00000305409 HAUS7Q99871 368 aa13.71□□□□□ -0.21
SCG2-201ENST00000305409 LARGE1O95461 756 aa13.71□□□□□ -0.22
SCG2-201ENST00000305409 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.22
SCG2-201ENST00000305409 PI16Q6UXB8 463 aa13.71□□□□□ -0.22
SCG2-201ENST00000305409 RUFY3Q7L099 469 aa13.71□□□□□ -0.22
SCG2-201ENST00000305409 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.22
SCG2-201ENST00000305409 THRAP3Q9Y2W1 955 aaKnown RBP13.71□□□□□ -0.22
SCG2-201ENST00000305409 TJP1Q07157 1748 aa13.7□□□□□ -0.22
SCG2-201ENST00000305409 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
SCG2-201ENST00000305409 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
SCG2-201ENST00000305409 SNAP23O00161 211 aa13.7□□□□□ -0.22
SCG2-201ENST00000305409 SLC27A2O14975 620 aa13.7□□□□□ -0.22
SCG2-201ENST00000305409 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
SCG2-201ENST00000305409 GORABQ5T7V8 394 aa13.7□□□□□ -0.22
SCG2-201ENST00000305409 HELBQ8NG08 1087 aaPredicted RBP13.7□□□□□ -0.22
SCG2-201ENST00000305409 TTC14Q96N46 770 aa13.7□□□□□ -0.22
SCG2-201ENST00000305409 CDCA7Q9BWT1 371 aaPredicted RBP13.7□□□□□ -0.22
SCG2-201ENST00000305409 CCDC87Q9NVE4 849 aa13.7□□□□□ -0.22
SCG2-201ENST00000305409 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
SCG2-201ENST00000305409 HIP1O00291 1037 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 IFIT1P09914 478 aaKnown RBP13.69□□□□□ -0.22
SCG2-201ENST00000305409 SCARF1Q14162 830 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 SUSD4Q5VX71 490 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 LDHAL6AQ6ZMR3 332 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 PAG1Q9NWQ8 432 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 TAF5LO75529 589 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 CSF1RP07333 972 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 MCM2P49736 904 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 EIF5P55010 431 aaKnown RBP13.69□□□□□ -0.22
SCG2-201ENST00000305409 CTSWP56202 376 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 NUCB2P80303 420 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 CUL4AQ13619 759 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 XAGE2Q96GT9 111 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 CWC22Q9HCG8 908 aaKnown RBP13.69□□□□□ -0.22
SCG2-201ENST00000305409 PDRG1Q9NUG6 133 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
SCG2-201ENST00000305409 CYP2E1P05181 493 aaPredicted RBP13.68□□□□□ -0.22
SCG2-201ENST00000305409 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
SCG2-201ENST00000305409 VPS53Q5VIR6 699 aa13.68□□□□□ -0.22
SCG2-201ENST00000305409 CNNM1Q9NRU3 951 aa13.68□□□□□ -0.22
SCG2-201ENST00000305409 ZNF609O15014 1411 aa13.68□□□□□ -0.22
SCG2-201ENST00000305409 PALLDQ8WX93 1383 aa13.68□□□□□ -0.22
SCG2-201ENST00000305409 A0A0G2JLW4 131 aa13.68□□□□□ -0.22
SCG2-201ENST00000305409 ZKSCAN1P17029 563 aaPredicted RBP13.68□□□□□ -0.22
SCG2-201ENST00000305409 BRPF3Q9ULD4 1205 aa13.68□□□□□ -0.22
SCG2-201ENST00000305409 EP400Q96L91 3159 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 TPRNQ4KMQ1 711 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 NECAB1Q8N987 351 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 KBTBD3Q8NAB2 608 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 IL17RAQ96F46 866 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 MED23Q9ULK4 1368 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 EPB41L2O43491 1005 aaKnown RBP13.67□□□□□ -0.22
SCG2-201ENST00000305409 CIAO1O76071 339 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 TTC39AQ5SRH9 613 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 BARGINQ6ZT62 677 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 CCDC83Q8IWF9 413 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 PLA2G12BQ9BX93 195 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 CYP46A1Q9Y6A2 500 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 DOT1LQ8TEK3 1739 aa13.67□□□□□ -0.22
SCG2-201ENST00000305409 NCLP19338 710 aaKnown RBP13.66□□□□□ -0.22
SCG2-201ENST00000305409 ZNF34Q8IZ26 560 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms