RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 CEP126Q9P2H0 1117 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 RABGAP1Q9Y3P9 1069 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 NOP2P46087 812 aaKnown RBP12.41□□□□□ -0.42
MECP2-201ENST00000303391 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
MECP2-201ENST00000303391 ZWINTO95229 277 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 INTS8Q75QN2 995 aaKnown RBP12.41□□□□□ -0.42
MECP2-201ENST00000303391 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 AIDAQ96BJ3 306 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 GOLGA8BA8MQT2 603 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 CASQ2O14958 399 aaPredicted RBP12.41□□□□□ -0.42
MECP2-201ENST00000303391 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 PLCB1Q9NQ66 1216 aa12.41□□□□□ -0.42
MECP2-201ENST00000303391 CWC25Q9NXE8 425 aaPredicted RBP12.41□□□□□ -0.42
MECP2-201ENST00000303391 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
MECP2-201ENST00000303391 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 CCDC40Q4G0X9 1142 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 CEP120Q8N960 986 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 MRPS27Q92552 414 aaKnown RBP12.4□□□□□ -0.42
MECP2-201ENST00000303391 BICDL2A1A5D9 508 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 AP1ARQ63HQ0 302 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 BCAP29Q9UHQ4 241 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 TTC22Q5TAA0 569 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 DHX37Q8IY37 1157 aaKnown RBP12.4□□□□□ -0.42
MECP2-201ENST00000303391 NKIRAS1Q9NYS0 192 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 RAB3IPQ96QF0 476 aaPredicted RBP12.4□□□□□ -0.42
MECP2-201ENST00000303391 FYB2Q5VWT5 728 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 FERMT3Q86UX7 667 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 NUCB1Q02818 461 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 MAP7D1Q3KQU3 841 aa12.4□□□□□ -0.42
MECP2-201ENST00000303391 KDM4AO75164 1064 aa12.4□□□□□ -0.43
MECP2-201ENST00000303391 CATIPQ7Z7H3 387 aa12.4□□□□□ -0.43
MECP2-201ENST00000303391 EXOC1Q9NV70 894 aa12.4□□□□□ -0.43
MECP2-201ENST00000303391 TMPOP42166 694 aaKnown RBP12.39□□□□□ -0.43
MECP2-201ENST00000303391 ASXL1Q8IXJ9 1541 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 ZNF76P36508 570 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 MAP3K21Q5TCX8 1036 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 PPP1R2P41236 205 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 TRPC3Q13507 836 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 IQCDQ96DY2 449 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 PPP2R3AQ06190 1150 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 CCDC14Q49A88 953 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 TAOK1Q7L7X3 1001 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 IQCA1Q86XH1 822 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 CCDC26Q8TAB7 109 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 CCDC186Q7Z3E2 898 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 GOLGA6CA6NDK9 693 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 GOLGA6DP0CG33 693 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 GOLGA6AQ9NYA3 693 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 THEGQ9P2T0 379 aa12.39□□□□□ -0.43
MECP2-201ENST00000303391 CCDC194A0A1B0GVG4 234 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
MECP2-201ENST00000303391 NSD3Q9BZ95 1437 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 MED4Q9NPJ6 270 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 LARSQ9P2J5 1176 aaKnown RBP12.38□□□□□ -0.43
MECP2-201ENST00000303391 ARID4AP29374 1257 aaPredicted RBP12.38□□□□□ -0.43
MECP2-201ENST00000303391 CNGA1P29973 690 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 RAB3IL1Q8TBN0 382 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 STMN1P16949 149 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 TTF1Q15361 905 aaPredicted RBP12.38□□□□□ -0.43
MECP2-201ENST00000303391 GPR161Q8N6U8 529 aaKnown RBP12.38□□□□□ -0.43
MECP2-201ENST00000303391 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 TTF2Q9UNY4 1162 aaKnown RBP12.38□□□□□ -0.43
MECP2-201ENST00000303391 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
MECP2-201ENST00000303391 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 PSMA7O14818 248 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 CHMP4BP1P59074 171 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 MTMR3Q13615 1198 aa12.38□□□□□ -0.43
MECP2-201ENST00000303391 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
MECP2-201ENST00000303391 THOC2Q8NI27 1593 aaKnown RBP12.37□□□□□ -0.43
MECP2-201ENST00000303391 PRPF4BQ13523 1007 aaKnown RBP12.37□□□□□ -0.43
MECP2-201ENST00000303391 IFT20Q8IY31 132 aa12.37□□□□□ -0.43
MECP2-201ENST00000303391 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
MECP2-201ENST00000303391 ZNF445P59923 1031 aa12.37□□□□□ -0.43
MECP2-201ENST00000303391 BRD3Q15059 726 aa12.37□□□□□ -0.43
MECP2-201ENST00000303391 MATR3P43243 847 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■■■■□ 24.6
MECP2-201ENST00000303391 FKBP4Q02790 459 aaKnown RBP eCLIP12.37□□□□□ -0.43
MECP2-201ENST00000303391 ZEB2O60315 1214 aa12.37□□□□□ -0.43
MECP2-201ENST00000303391 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
MECP2-201ENST00000303391 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
MECP2-201ENST00000303391 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
MECP2-201ENST00000303391 PCF11O94913 1555 aaKnown RBP12.37□□□□□ -0.43
MECP2-201ENST00000303391 BRAPQ7Z569 592 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 ERMNQ8TAM6 284 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 GOLGA5Q8TBA6 731 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 TRIM47Q96LD4 638 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 NAPBQ9H115 298 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 CTTNBP2Q8WZ74 1663 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 CCDC62Q6P9F0 684 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 CSRNP2Q9H175 543 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 BANK1Q8NDB2 785 aa12.36□□□□□ -0.43
MECP2-201ENST00000303391 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
MECP2-201ENST00000303391 PPFIA4O75335 1185 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms