RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 FAM227BQ96M60 508 aa14.14□□□□□ -0.15
PDGFD-201ENST00000302251 SGSM2O43147 1006 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 DMTNQ08495 405 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 IFNKQ9P0W0 207 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 ZNF215Q9UL58 517 aaPredicted RBP14.13□□□□□ -0.15
PDGFD-201ENST00000302251 NDUFB9Q9Y6M9 179 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 KIF20BQ96Q89 1820 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 KIF4BQ2VIQ3 1234 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 CCDC144CPQ8IYA2 1237 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 MARCKSP29966 332 aaPredicted RBP14.13□□□□□ -0.15
PDGFD-201ENST00000302251 CWF19L2Q2TBE0 894 aaKnown RBP14.13□□□□□ -0.15
PDGFD-201ENST00000302251 PDLIM2Q96JY6 352 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 CCDC171Q6TFL3 1326 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 PTPRMP28827 1452 aa14.13□□□□□ -0.15
PDGFD-201ENST00000302251 CTAGE5O15320 804 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 ZNF75DP51815 510 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 RUFY3Q7L099 469 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 JMYQ8N9B5 988 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 ACBD3Q9H3P7 528 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 A0A1B0GVL5 298 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 NBPF7P0C2Y1 421 aaPredicted RBP14.12□□□□□ -0.15
PDGFD-201ENST00000302251 CASQ1P31415 396 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 HSPA4P34932 840 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 PIP4K2AP48426 406 aaPredicted RBP14.12□□□□□ -0.15
PDGFD-201ENST00000302251 GSDMDP57764 484 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 CCDC70Q6NSX1 233 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 GOLIM4O00461 696 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 CHL1O00533 1208 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 PHACTR2O75167 634 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 TTC6Q86TZ1 520 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 MYD88Q99836 296 aa14.12□□□□□ -0.15
PDGFD-201ENST00000302251 RTL1A6NKG5 1358 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 SOS1Q07889 1333 aaPredicted RBP14.11□□□□□ -0.15
PDGFD-201ENST00000302251 JAK2O60674 1132 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 SETQ01105 290 aaPredicted RBP14.11□□□□□ -0.15
PDGFD-201ENST00000302251 ME3Q16798 604 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 KLHDC4Q8TBB5 520 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 RUFY1Q96T51 708 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 CBFA2T2O43439 604 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 PTCD1O75127 700 aaKnown RBP14.11□□□□□ -0.15
PDGFD-201ENST00000302251 VPS53Q5VIR6 699 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 ZSCAN25Q6NSZ9 544 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 IBTKQ9P2D0 1353 aaPredicted RBP14.11□□□□□ -0.15
PDGFD-201ENST00000302251 KIAA1524Q8TCG1 905 aa14.11□□□□□ -0.15
PDGFD-201ENST00000302251 PDIA4P13667 645 aaKnown RBP14.1□□□□□ -0.15
PDGFD-201ENST00000302251 UBASH3AP57075 661 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 NUP133Q8WUM0 1156 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 NR1I2O75469 434 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 PTH1RQ03431 593 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 FILIP1LQ4L180 1135 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 C10orf67Q8IYJ2 551 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 TRIM34Q9BYJ4 488 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 ZSCAN12O43309 604 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 ERCC6LQ2NKX8 1250 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 ADCK5Q3MIX3 580 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 PUS7Q96PZ0 661 aaKnown RBP14.1□□□□□ -0.15
PDGFD-201ENST00000302251 MTMR6Q9Y217 621 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 CDC42BPGQ6DT37 1551 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 ERICH2A1L162 156 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 OTUD7BQ6GQQ9 843 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 ORC3Q9UBD5 711 aaPredicted RBP14.1□□□□□ -0.15
PDGFD-201ENST00000302251 RIMS2Q9UQ26 1411 aa14.1□□□□□ -0.15
PDGFD-201ENST00000302251 APOBRQ0VD83 1088 aa14.09□□□□□ -0.15
PDGFD-201ENST00000302251 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
PDGFD-201ENST00000302251 CCDC12Q8WUD4 166 aaPredicted RBP14.09□□□□□ -0.15
PDGFD-201ENST00000302251 LEO1Q8WVC0 666 aaPredicted RBP14.09□□□□□ -0.15
PDGFD-201ENST00000302251 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
PDGFD-201ENST00000302251 RAD50Q92878 1312 aa14.09□□□□□ -0.15
PDGFD-201ENST00000302251 ARHGAP31Q2M1Z3 1444 aa14.09□□□□□ -0.15
PDGFD-201ENST00000302251 ERLIN1O75477 346 aa14.09□□□□□ -0.15
PDGFD-201ENST00000302251 EDC3Q96F86 508 aaKnown RBP14.09□□□□□ -0.15
PDGFD-201ENST00000302251 UTP14AQ9BVJ6 771 aaKnown RBP14.09□□□□□ -0.15
PDGFD-201ENST00000302251 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
PDGFD-201ENST00000302251 CCDC129Q6ZRS4 1044 aa14.09□□□□□ -0.15
PDGFD-201ENST00000302251 NCOA5Q9HCD5 579 aaKnown RBP14.09□□□□□ -0.15
PDGFD-201ENST00000302251 DBF4Q9UBU7 674 aaPredicted RBP14.09□□□□□ -0.15
PDGFD-201ENST00000302251 TTC39AQ5SRH9 613 aa14.08□□□□□ -0.16
PDGFD-201ENST00000302251 CNNM3Q8NE01 707 aa14.08□□□□□ -0.16
PDGFD-201ENST00000302251 GOLGA8BA8MQT2 603 aa14.08□□□□□ -0.16
PDGFD-201ENST00000302251 EIF3JO75822 258 aaKnown RBP14.08□□□□□ -0.16
PDGFD-201ENST00000302251 CEBPAP49715 358 aaPredicted RBP14.08□□□□□ -0.16
PDGFD-201ENST00000302251 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
PDGFD-201ENST00000302251 UBE3BQ7Z3V4 1068 aa14.08□□□□□ -0.16
PDGFD-201ENST00000302251 EYA1Q99502 592 aa14.08□□□□□ -0.16
PDGFD-201ENST00000302251 ZSCAN16Q9H4T2 348 aaPredicted RBP14.08□□□□□ -0.16
PDGFD-201ENST00000302251 EPB41L2O43491 1005 aaKnown RBP14.07□□□□□ -0.16
PDGFD-201ENST00000302251 ARFGAP3Q9NP61 516 aa14.07□□□□□ -0.16
PDGFD-201ENST00000302251 MED14O60244 1454 aa14.07□□□□□ -0.16
PDGFD-201ENST00000302251 LARGE1O95461 756 aa14.07□□□□□ -0.16
PDGFD-201ENST00000302251 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
PDGFD-201ENST00000302251 CACTINQ8WUQ7 758 aaKnown RBP14.07□□□□□ -0.16
PDGFD-201ENST00000302251 TSPYL1Q9H0U9 437 aa14.07□□□□□ -0.16
PDGFD-201ENST00000302251 RAI14Q9P0K7 980 aa14.07□□□□□ -0.16
PDGFD-201ENST00000302251 IDH1O75874 414 aaKnown RBP14.07□□□□□ -0.16
PDGFD-201ENST00000302251 CAVIN2O95810 425 aa14.07□□□□□ -0.16
PDGFD-201ENST00000302251 MRPS27Q92552 414 aaKnown RBP14.07□□□□□ -0.16
PDGFD-201ENST00000302251 CUL4AQ13619 759 aa14.06□□□□□ -0.16
PDGFD-201ENST00000302251 SMARCE1Q969G3 411 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms