RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
UBXN1-202ENST00000301935 LAMB2P55268 1798 aa19.22■□□□□ 0.67
UBXN1-202ENST00000301935 PPEF1O14829 653 aaPredicted RBP19.22■□□□□ 0.67
UBXN1-202ENST00000301935 GIGYF2Q6Y7W6 1299 aaKnown RBP19.22■□□□□ 0.67
UBXN1-202ENST00000301935 CRAMP1Q96RY5 1269 aa19.22■□□□□ 0.67
UBXN1-202ENST00000301935 DBF4Q9UBU7 674 aaPredicted RBP19.22■□□□□ 0.67
UBXN1-202ENST00000301935 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
UBXN1-202ENST00000301935 RASSF10A6NK89 507 aa19.21■□□□□ 0.67
UBXN1-202ENST00000301935 MS4A1P11836 297 aa19.21■□□□□ 0.67
UBXN1-202ENST00000301935 EIF2S2P20042 333 aaKnown RBP19.21■□□□□ 0.67
UBXN1-202ENST00000301935 SLC51AQ86UW1 340 aa19.21■□□□□ 0.67
UBXN1-202ENST00000301935 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
UBXN1-202ENST00000301935 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
UBXN1-202ENST00000301935 PRDM10Q9NQV6 1147 aa19.21■□□□□ 0.67
UBXN1-202ENST00000301935 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
UBXN1-202ENST00000301935 GJA3Q9Y6H8 435 aa19.21■□□□□ 0.67
UBXN1-202ENST00000301935 LMOD1P29536 600 aaPredicted RBP19.2■□□□□ 0.66
UBXN1-202ENST00000301935 SCNN1DP51172 638 aa19.2■□□□□ 0.66
UBXN1-202ENST00000301935 C3orf67Q6ZVT6 689 aa19.2■□□□□ 0.66
UBXN1-202ENST00000301935 LRP10Q7Z4F1 713 aa19.2■□□□□ 0.66
UBXN1-202ENST00000301935 LARGE2Q8N3Y3 721 aa19.2■□□□□ 0.66
UBXN1-202ENST00000301935 ARHGAP45Q92619 1136 aa19.2■□□□□ 0.66
UBXN1-202ENST00000301935 AIDAQ96BJ3 306 aa19.2■□□□□ 0.66
UBXN1-202ENST00000301935 HYPKQ9NX55 129 aa19.2■□□□□ 0.66
UBXN1-202ENST00000301935 BCAR3O75815 825 aa19.19■□□□□ 0.66
UBXN1-202ENST00000301935 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
UBXN1-202ENST00000301935 CTCFP49711 727 aaPredicted RBP19.19■□□□□ 0.66
UBXN1-202ENST00000301935 PARP10Q53GL7 1025 aa19.19■□□□□ 0.66
UBXN1-202ENST00000301935 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
UBXN1-202ENST00000301935 DDX21Q9NR30 783 aaKnown RBP eCLIP19.19■□□□□ 0.66
UBXN1-202ENST00000301935 TRPM7Q96QT4 1865 aa19.19■□□□□ 0.66
UBXN1-202ENST00000301935 RRP1P56182 461 aaKnown RBP19.18■□□□□ 0.66
UBXN1-202ENST00000301935 DEFB115Q30KQ5 88 aa19.18■□□□□ 0.66
UBXN1-202ENST00000301935 WBP1LQ9NX94 342 aa19.18■□□□□ 0.66
UBXN1-202ENST00000301935 PTPRCP08575 1304 aa19.18■□□□□ 0.66
UBXN1-202ENST00000301935 TCERG1O14776 1098 aaKnown RBP19.17■□□□□ 0.66
UBXN1-202ENST00000301935 PDIA6Q15084 440 aa19.17■□□□□ 0.66
UBXN1-202ENST00000301935 NIM1KQ8IY84 436 aa19.17■□□□□ 0.66
UBXN1-202ENST00000301935 NLRP3Q96P20 1036 aa19.17■□□□□ 0.66
UBXN1-202ENST00000301935 EPS15P42566 896 aa19.16■□□□□ 0.66
UBXN1-202ENST00000301935 ZKSCAN2Q63HK3 967 aa19.16■□□□□ 0.66
UBXN1-202ENST00000301935 BCL2L13Q9BXK5 485 aa19.16■□□□□ 0.66
UBXN1-202ENST00000301935 ABT1Q9ULW3 272 aaKnown RBP19.16■□□□□ 0.66
UBXN1-202ENST00000301935 ABCC4O15439 1325 aa19.16■□□□□ 0.66
UBXN1-202ENST00000301935 PPIP5K2O43314 1243 aa19.15■□□□□ 0.66
UBXN1-202ENST00000301935 PROSER3Q2NL68 480 aa19.15■□□□□ 0.66
UBXN1-202ENST00000301935 USP50Q70EL3 339 aaPredicted RBP19.15■□□□□ 0.66
UBXN1-202ENST00000301935 UTP14AQ9BVJ6 771 aaKnown RBP19.15■□□□□ 0.66
UBXN1-202ENST00000301935 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
UBXN1-202ENST00000301935 CHPF2Q9P2E5 772 aa19.15■□□□□ 0.66
UBXN1-202ENST00000301935 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
UBXN1-202ENST00000301935 WDR33Q9C0J8 1336 aaKnown RBP19.15■□□□□ 0.66
UBXN1-202ENST00000301935 NEFLP07196 543 aa19.14■□□□□ 0.65
UBXN1-202ENST00000301935 PDE3AQ14432 1141 aa19.14■□□□□ 0.65
UBXN1-202ENST00000301935 AOC3Q16853 763 aa19.14■□□□□ 0.65
UBXN1-202ENST00000301935 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.65
UBXN1-202ENST00000301935 NECTIN2Q92692 538 aa19.14■□□□□ 0.65
UBXN1-202ENST00000301935 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-202ENST00000301935 TMX4Q9H1E5 349 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-202ENST00000301935 NOB1Q9ULX3 412 aaKnown RBP19.14■□□□□ 0.65
UBXN1-202ENST00000301935 LRRC37AA6NMS7 1700 aa19.14■□□□□ 0.65
UBXN1-202ENST00000301935 DDX58O95786 925 aaKnown RBP19.13■□□□□ 0.65
UBXN1-202ENST00000301935 ANXA1P04083 346 aa19.13■□□□□ 0.65
UBXN1-202ENST00000301935 LBX1P52954 281 aa19.13■□□□□ 0.65
UBXN1-202ENST00000301935 ATF7IPQ6VMQ6 1270 aa19.13■□□□□ 0.65
UBXN1-202ENST00000301935 VPS33BQ9H267 617 aa19.13■□□□□ 0.65
UBXN1-202ENST00000301935 DDX60Q8IY21 1712 aaKnown RBP19.12■□□□□ 0.65
UBXN1-202ENST00000301935 MAP2K1Q02750 393 aaPredicted RBP19.12■□□□□ 0.65
UBXN1-202ENST00000301935 FMR1Q06787 632 aaKnown RBP eCLIP19.12■□□□□ 0.65
UBXN1-202ENST00000301935 FLIIQ13045 1269 aa19.12■□□□□ 0.65
UBXN1-202ENST00000301935 RTFDC1Q9BY42 306 aaPredicted RBP19.12■□□□□ 0.65
UBXN1-202ENST00000301935 DUOX1Q9NRD9 1551 aa19.11■□□□□ 0.65
UBXN1-202ENST00000301935 HSPA8P11142 646 aaKnown RBP19.11■□□□□ 0.65
UBXN1-202ENST00000301935 HSP90AB3PQ58FF7 597 aa19.11■□□□□ 0.65
UBXN1-202ENST00000301935 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
UBXN1-202ENST00000301935 TAF1P21675 1872 aa19.1■□□□□ 0.65
UBXN1-202ENST00000301935 NLRP10Q86W26 655 aa19.1■□□□□ 0.65
UBXN1-202ENST00000301935 ADARB2Q9NS39 739 aaKnown RBP19.1■□□□□ 0.65
UBXN1-202ENST00000301935 GPRC5DQ9NZD1 345 aa19.1■□□□□ 0.65
UBXN1-202ENST00000301935 ZNRF3Q9ULT6 936 aa19.1■□□□□ 0.65
UBXN1-202ENST00000301935 TRAF5O00463 557 aa19.09■□□□□ 0.65
UBXN1-202ENST00000301935 CXCL9Q07325 125 aa19.09■□□□□ 0.65
UBXN1-202ENST00000301935 FKBP5Q13451 457 aaPredicted RBP19.09■□□□□ 0.65
UBXN1-202ENST00000301935 DPP8Q6V1X1 898 aaPredicted RBP19.09■□□□□ 0.65
UBXN1-202ENST00000301935 COPS6Q7L5N1 327 aa19.09■□□□□ 0.65
UBXN1-202ENST00000301935 FTSJ3Q8IY81 847 aaKnown RBP19.09■□□□□ 0.65
UBXN1-202ENST00000301935 DZIP1LQ8IYY4 767 aaKnown RBP19.09■□□□□ 0.65
UBXN1-202ENST00000301935 XAGE3Q8WTP9 111 aa19.09■□□□□ 0.65
UBXN1-202ENST00000301935 CAPNS2Q96L46 248 aa19.09■□□□□ 0.65
UBXN1-202ENST00000301935 CDHR2Q9BYE9 1310 aa19.08■□□□□ 0.65
UBXN1-202ENST00000301935 BBOX1O75936 387 aa19.08■□□□□ 0.64
UBXN1-202ENST00000301935 ECE1P42892 770 aa19.08■□□□□ 0.64
UBXN1-202ENST00000301935 AIMP1Q12904 312 aaKnown RBP19.08■□□□□ 0.64
UBXN1-202ENST00000301935 CST9Q5W186 159 aa19.08■□□□□ 0.64
UBXN1-202ENST00000301935 PAXIP1Q6ZW49 1069 aaPredicted RBP19.08■□□□□ 0.64
UBXN1-202ENST00000301935 SP8Q8IXZ3 490 aa19.08■□□□□ 0.64
UBXN1-202ENST00000301935 TLL2Q9Y6L7 1015 aa19.08■□□□□ 0.64
UBXN1-202ENST00000301935 SH3TC1Q8TE82 1336 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 PLIN1O60240 522 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 HCLS1P14317 486 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms