RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ATP5JP18859 108 aa17.51■□□□□ 0.39
SMG8-201ENST00000300917 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
SMG8-201ENST00000300917 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
SMG8-201ENST00000300917 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
SMG8-201ENST00000300917 CYP19A1P11511 503 aaPredicted RBP17.51■□□□□ 0.39
SMG8-201ENST00000300917 MCM2P49736 904 aa17.51■□□□□ 0.39
SMG8-201ENST00000300917 KCNQ2O43526 872 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 CEP126Q9P2H0 1117 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 ARFGEF2Q9Y6D5 1785 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 STK3Q13188 491 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 CAVIN1Q6NZI2 390 aaKnown RBP17.5■□□□□ 0.39
SMG8-201ENST00000300917 PI16Q6UXB8 463 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 ABCA3Q99758 1704 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 SLC27A2O14975 620 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 CYP2E1P05181 493 aaPredicted RBP17.5■□□□□ 0.39
SMG8-201ENST00000300917 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
SMG8-201ENST00000300917 RBM27Q9P2N5 1060 aaKnown RBP17.5■□□□□ 0.39
SMG8-201ENST00000300917 CYP46A1Q9Y6A2 500 aa17.5■□□□□ 0.39
SMG8-201ENST00000300917 LRRC2Q9BYS8 371 aa17.49■□□□□ 0.39
SMG8-201ENST00000300917 GREM2Q9H772 168 aa17.49■□□□□ 0.39
SMG8-201ENST00000300917 ATP6V1AP38606 617 aa17.49■□□□□ 0.39
SMG8-201ENST00000300917 IL15P40933 162 aaPredicted RBP17.49■□□□□ 0.39
SMG8-201ENST00000300917 GAS2L3Q86XJ1 694 aa17.49■□□□□ 0.39
SMG8-201ENST00000300917 HELBQ8NG08 1087 aaPredicted RBP17.49■□□□□ 0.39
SMG8-201ENST00000300917 MAP3K15Q6ZN16 1313 aa17.49■□□□□ 0.39
SMG8-201ENST00000300917 TNS2Q63HR2 1409 aa17.49■□□□□ 0.39
SMG8-201ENST00000300917 ROBO1Q9Y6N7 1651 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 IFIT1P09914 478 aaKnown RBP17.48■□□□□ 0.39
SMG8-201ENST00000300917 IFIT5Q13325 482 aaKnown RBP17.48■□□□□ 0.39
SMG8-201ENST00000300917 TTC14Q96N46 770 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
SMG8-201ENST00000300917 XRCC6P12956 609 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMG8-201ENST00000300917 CUL4AQ13619 759 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 FAM98CQ17RN3 349 aaKnown RBP17.48■□□□□ 0.39
SMG8-201ENST00000300917 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
SMG8-201ENST00000300917 MARCH10Q8NA82 808 aaPredicted RBP17.48■□□□□ 0.39
SMG8-201ENST00000300917 MAP4K1Q92918 833 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 C8orf37Q96NL8 207 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 SNAP23O00161 211 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 HIP1O00291 1037 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
SMG8-201ENST00000300917 VPS53Q5VIR6 699 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
SMG8-201ENST00000300917 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
SMG8-201ENST00000300917 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
SMG8-201ENST00000300917 TOGARAM1Q9Y4F4 1720 aa17.47■□□□□ 0.39
SMG8-201ENST00000300917 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
SMG8-201ENST00000300917 LDHAL6AQ6ZMR3 332 aa17.47■□□□□ 0.39
SMG8-201ENST00000300917 NHSL1Q5SYE7 1610 aa17.47■□□□□ 0.39
SMG8-201ENST00000300917 COL15A1P39059 1388 aa17.47■□□□□ 0.39
SMG8-201ENST00000300917 IRS4O14654 1257 aaPredicted RBP17.46■□□□□ 0.39
SMG8-201ENST00000300917 TAF5LO75529 589 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 HAUS7Q99871 368 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 NSFL1CQ9UNZ2 370 aaKnown RBP17.46■□□□□ 0.39
SMG8-201ENST00000300917 BCL9O00512 1426 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 ITGA6P23229 1130 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 LMBRD1Q9NUN5 540 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 SCARF1Q14162 830 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 METTL24Q5JXM2 366 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 ZBTB38Q8NAP3 1195 aaPredicted RBP17.46■□□□□ 0.39
SMG8-201ENST00000300917 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.39
SMG8-201ENST00000300917 VSIG10Q8N0Z9 540 aa17.45■□□□□ 0.38
SMG8-201ENST00000300917 SHANK3Q9BYB0 1731 aa17.45■□□□□ 0.38
SMG8-201ENST00000300917 PCCAP05165 728 aaPredicted RBP17.45■□□□□ 0.38
SMG8-201ENST00000300917 ME3Q16798 604 aa17.45■□□□□ 0.38
SMG8-201ENST00000300917 TTC39AQ5SRH9 613 aa17.45■□□□□ 0.38
SMG8-201ENST00000300917 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
SMG8-201ENST00000300917 SPATA31A1Q5TZJ5 1347 aa17.45■□□□□ 0.38
SMG8-201ENST00000300917 BLOC1S2Q6QNY1 142 aa17.45■□□□□ 0.38
SMG8-201ENST00000300917 XAGE2Q96GT9 111 aa17.45■□□□□ 0.38
SMG8-201ENST00000300917 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
SMG8-201ENST00000300917 ZNF609O15014 1411 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 BRD1O95696 1058 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 WASHC4Q2M389 1173 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 ZSWIM6Q9HCJ5 1215 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
SMG8-201ENST00000300917 VPS37CA5D8V6 355 aaPredicted RBP17.43■□□□□ 0.38
SMG8-201ENST00000300917 UBAP1LF5GYI3 381 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
SMG8-201ENST00000300917 RNF20Q5VTR2 975 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 GJB2P29033 226 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 FGD1P98174 961 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 ITPK1Q13572 414 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 SKOR2Q2VWA4 1001 aaPredicted RBP17.43■□□□□ 0.38
SMG8-201ENST00000300917 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 L1TD1Q5T7N2 865 aaKnown RBP17.43■□□□□ 0.38
SMG8-201ENST00000300917 CHST3Q7LGC8 479 aa17.43■□□□□ 0.38
SMG8-201ENST00000300917 DISP2A7MBM2 1401 aa17.42■□□□□ 0.38
SMG8-201ENST00000300917 LOC102724428A0A0B4J2F2 783 aa17.42■□□□□ 0.38
SMG8-201ENST00000300917 SIK1P57059 783 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms