RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 KCNQ2O43526 872 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 CRKLP46109 303 aaKnown RBP12.01□□□□□ -0.49
GABRB3-201ENST00000299267 BRF1Q92994 677 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
GABRB3-201ENST00000299267 ARHGEF40Q8TER5 1519 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 TPM4P67936 248 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 KIAA2012Q0VF49 1180 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 NYXQ9GZU5 481 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 USPL1Q5W0Q7 1092 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 ABCC4O15439 1325 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 SSFA2P28290 1259 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 TNNI3KQ59H18 835 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 FPGT-TNNI3KV9GXZ4 949 aa12.01□□□□□ -0.49
GABRB3-201ENST00000299267 C1orf167Q5SNV9 1468 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 PDE8AO60658 829 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 UQCRFS1P1P0C7P4 283 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 UNC5CLQ8IV45 518 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 SEPT12Q8IYM1 358 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 ZNF444Q8N0Y2 327 aaPredicted RBP12□□□□□ -0.49
GABRB3-201ENST00000299267 CWC22Q9HCG8 908 aaKnown RBP12□□□□□ -0.49
GABRB3-201ENST00000299267 AGLP35573 1532 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 ANKARQ7Z5J8 1434 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 PICALMQ13492 652 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 FAM227BQ96M60 508 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 NEK1Q96PY6 1258 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 LIMCH1Q9UPQ0 1083 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 WDR33Q9C0J8 1336 aaKnown RBP12□□□□□ -0.49
GABRB3-201ENST00000299267 CHMLP26374 656 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 TTF1Q15361 905 aaPredicted RBP12□□□□□ -0.49
GABRB3-201ENST00000299267 LRRC24Q50LG9 513 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 NAA16Q6N069 864 aaPredicted RBP12□□□□□ -0.49
GABRB3-201ENST00000299267 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 MAGEB6Q8N7X4 407 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 TFIP11Q9UBB9 837 aaKnown RBP12□□□□□ -0.49
GABRB3-201ENST00000299267 SLC4A4Q9Y6R1 1079 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 GOLGA8BA8MQT2 603 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 MCMDC2Q4G0Z9 681 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
GABRB3-201ENST00000299267 XAGE2Q96GT9 111 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 VAT1LQ9HCJ6 419 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 STX8Q9UNK0 236 aa12□□□□□ -0.49
GABRB3-201ENST00000299267 FRMPD1Q5SYB0 1578 aa11.99□□□□□ -0.49
GABRB3-201ENST00000299267 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
GABRB3-201ENST00000299267 PUS3Q9BZE2 481 aaKnown RBP11.99□□□□□ -0.49
GABRB3-201ENST00000299267 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
GABRB3-201ENST00000299267 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
GABRB3-201ENST00000299267 ZSCAN31Q96LW9 406 aaPredicted RBP11.99□□□□□ -0.49
GABRB3-201ENST00000299267 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
GABRB3-201ENST00000299267 CDK12Q9NYV4 1490 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-201ENST00000299267 PARP10Q53GL7 1025 aa11.98□□□□□ -0.49
GABRB3-201ENST00000299267 TSPY2A6NKD2 308 aa11.98□□□□□ -0.49
GABRB3-201ENST00000299267 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
GABRB3-201ENST00000299267 SYNE4Q8N205 404 aa11.98□□□□□ -0.49
GABRB3-201ENST00000299267 MCM4P33991 863 aa11.98□□□□□ -0.49
GABRB3-201ENST00000299267 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
GABRB3-201ENST00000299267 TMEM67Q5HYA8 995 aa11.98□□□□□ -0.49
GABRB3-201ENST00000299267 SLC12A7Q9Y666 1083 aa11.98□□□□□ -0.49
GABRB3-201ENST00000299267 CPSF1Q10570 1443 aaKnown RBP11.97□□□□□ -0.49
GABRB3-201ENST00000299267 QRICH2Q9H0J4 1663 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 CPS1P31327 1500 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 KRT85P78386 507 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 MFSD6Q6ZSS7 791 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
GABRB3-201ENST00000299267 UFL1O94874 794 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 GREM2Q9H772 168 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 AFF2P51816 1311 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 KINO60870 393 aaKnown RBP11.97□□□□□ -0.49
GABRB3-201ENST00000299267 STK32BQ9NY57 414 aa11.97□□□□□ -0.49
GABRB3-201ENST00000299267 RXRAP19793 462 aa11.96□□□□□ -0.49
GABRB3-201ENST00000299267 BAG3O95817 575 aa11.96□□□□□ -0.49
GABRB3-201ENST00000299267 PDE4CQ08493 712 aa11.96□□□□□ -0.49
GABRB3-201ENST00000299267 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
GABRB3-201ENST00000299267 SPATA32Q96LK8 384 aa11.96□□□□□ -0.49
GABRB3-201ENST00000299267 TTC41PQ6P2S7 1318 aa11.96□□□□□ -0.49
GABRB3-201ENST00000299267 HSPA1LP34931 641 aa11.96□□□□□ -0.5
GABRB3-201ENST00000299267 SSH3Q8TE77 659 aa11.96□□□□□ -0.5
GABRB3-201ENST00000299267 LDHCP07864 332 aa11.96□□□□□ -0.5
GABRB3-201ENST00000299267 ZAP70P43403 619 aa11.96□□□□□ -0.5
GABRB3-201ENST00000299267 SOGA3Q5TF21 947 aa11.96□□□□□ -0.5
GABRB3-201ENST00000299267 KRT27Q7Z3Y8 459 aa11.96□□□□□ -0.5
GABRB3-201ENST00000299267 CCDC43Q96MW1 224 aaKnown RBP11.96□□□□□ -0.5
GABRB3-201ENST00000299267 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 SIRT2Q8IXJ6 389 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 ZKSCAN3Q9BRR0 538 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 SEC31BQ9NQW1 1179 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 GOLGA8AA7E2F4 631 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 RNF113AO15541 343 aaKnown RBP11.95□□□□□ -0.5
GABRB3-201ENST00000299267 HLFQ16534 295 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 CCDC96Q2M329 555 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 GIGYF2Q6Y7W6 1299 aaKnown RBP11.95□□□□□ -0.5
GABRB3-201ENST00000299267 CCAR1Q8IX12 1150 aaKnown RBP11.95□□□□□ -0.5
GABRB3-201ENST00000299267 CTCFLQ8NI51 663 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-201ENST00000299267 ARID3AQ99856 593 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 KLF18A0A0U1RQI7 1052 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 SNAP23O00161 211 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 GJB2P29033 226 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 ATG3Q9NT62 314 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms