RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PYCARDQ9ULZ3 195 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 LIMCH1Q9UPQ0 1083 aa18.54■□□□□ 0.56
UBAP1-201ENST00000297661 CTIFO43310 598 aaKnown RBP18.53■□□□□ 0.56
UBAP1-201ENST00000297661 KDM4AO75164 1064 aa18.53■□□□□ 0.56
UBAP1-201ENST00000297661 CCDC183Q5T5S1 534 aa18.53■□□□□ 0.56
UBAP1-201ENST00000297661 NECAB1Q8N987 351 aa18.53■□□□□ 0.56
UBAP1-201ENST00000297661 IL17RAQ96F46 866 aa18.53■□□□□ 0.56
UBAP1-201ENST00000297661 KCNF1Q9H3M0 494 aa18.53■□□□□ 0.56
UBAP1-201ENST00000297661 SMC3Q9UQE7 1217 aa18.53■□□□□ 0.56
UBAP1-201ENST00000297661 EAF2Q96CJ1 260 aaPredicted RBP18.52■□□□□ 0.56
UBAP1-201ENST00000297661 ERBB3P21860 1342 aa18.52■□□□□ 0.56
UBAP1-201ENST00000297661 BCL9LQ86UU0 1499 aa18.52■□□□□ 0.56
UBAP1-201ENST00000297661 A0A0G2JS52 829 aa18.52■□□□□ 0.56
UBAP1-201ENST00000297661 STX6O43752 255 aa18.52■□□□□ 0.56
UBAP1-201ENST00000297661 SASH1O94885 1247 aa18.52■□□□□ 0.56
UBAP1-201ENST00000297661 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
UBAP1-201ENST00000297661 HYPKQ9NX55 129 aa18.52■□□□□ 0.56
UBAP1-201ENST00000297661 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.56
UBAP1-201ENST00000297661 USP54Q70EL1 1684 aa18.52■□□□□ 0.55
UBAP1-201ENST00000297661 ZSCAN22P10073 491 aaPredicted RBP18.51■□□□□ 0.55
UBAP1-201ENST00000297661 KCNJ4P48050 445 aa18.51■□□□□ 0.55
UBAP1-201ENST00000297661 OGFRQ9NZT2 677 aa18.51■□□□□ 0.55
UBAP1-201ENST00000297661 TTC41PQ6P2S7 1318 aa18.51■□□□□ 0.55
UBAP1-201ENST00000297661 AMOTQ4VCS5 1084 aa18.51■□□□□ 0.55
UBAP1-201ENST00000297661 EDC3Q96F86 508 aaKnown RBP18.51■□□□□ 0.55
UBAP1-201ENST00000297661 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
UBAP1-201ENST00000297661 PDRG1Q9NUG6 133 aa18.51■□□□□ 0.55
UBAP1-201ENST00000297661 GRM8O00222 908 aa18.51■□□□□ 0.55
UBAP1-201ENST00000297661 TAF6LQ9Y6J9 622 aa18.51■□□□□ 0.55
UBAP1-201ENST00000297661 PLCH1Q4KWH8 1693 aa18.5■□□□□ 0.55
UBAP1-201ENST00000297661 COL18A1P39060 1754 aa18.5■□□□□ 0.55
UBAP1-201ENST00000297661 GJB2P29033 226 aa18.5■□□□□ 0.55
UBAP1-201ENST00000297661 MTX1Q13505 466 aa18.5■□□□□ 0.55
UBAP1-201ENST00000297661 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
UBAP1-201ENST00000297661 NDUFB9Q9Y6M9 179 aa18.5■□□□□ 0.55
UBAP1-201ENST00000297661 COL5A2P05997 1499 aaPredicted RBP18.5■□□□□ 0.55
UBAP1-201ENST00000297661 NMIQ13287 307 aaPredicted RBP18.5■□□□□ 0.55
UBAP1-201ENST00000297661 POTEAQ6S8J7 498 aa18.5■□□□□ 0.55
UBAP1-201ENST00000297661 RIC3Q7Z5B4 369 aa18.5■□□□□ 0.55
UBAP1-201ENST00000297661 ALDH1L1O75891 902 aa18.49■□□□□ 0.55
UBAP1-201ENST00000297661 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
UBAP1-201ENST00000297661 VPS37CA5D8V6 355 aaPredicted RBP18.49■□□□□ 0.55
UBAP1-201ENST00000297661 IGKV5-2P06315 115 aa18.49■□□□□ 0.55
UBAP1-201ENST00000297661 G3BP1Q13283 466 aaKnown RBP eCLIP18.49■□□□□ 0.55
UBAP1-201ENST00000297661 FAM98CQ17RN3 349 aaKnown RBP18.49■□□□□ 0.55
UBAP1-201ENST00000297661 RUFY2Q8WXA3 655 aa18.49■□□□□ 0.55
UBAP1-201ENST00000297661 GPATCH3Q96I76 525 aa18.49■□□□□ 0.55
UBAP1-201ENST00000297661 RBM8AQ9Y5S9 174 aaKnown RBP18.49■□□□□ 0.55
UBAP1-201ENST00000297661 AP5Z1O43299 807 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 DNM1Q05193 864 aaKnown RBP18.48■□□□□ 0.55
UBAP1-201ENST00000297661 NCBP1Q09161 790 aaKnown RBP18.48■□□□□ 0.55
UBAP1-201ENST00000297661 ST3GAL1Q11201 340 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 SLIT2O94813 1529 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 F13A1P00488 732 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 CHGBP05060 677 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 PDIA6Q15084 440 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 ME3Q16798 604 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 EPHA10Q5JZY3 1008 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 SPC24Q8NBT2 197 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 LINS1Q8NG48 757 aa18.48■□□□□ 0.55
UBAP1-201ENST00000297661 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.48■□□□□ 0.55
UBAP1-201ENST00000297661 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 ZBTB22O15209 634 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 CHMP3Q9Y3E7 222 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 CYP46A1Q9Y6A2 500 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 CCDC171Q6TFL3 1326 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
UBAP1-201ENST00000297661 TMEM87AQ8NBN3 555 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 NFATC2IPQ8NCF5 419 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 EVI5LQ96CN4 794 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 LMO7Q8WWI1 1683 aa18.47■□□□□ 0.55
UBAP1-201ENST00000297661 WDR17Q8IZU2 1322 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 TPM3P06753 285 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 FAM173BQ6P4H8 233 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 FERMT3Q86UX7 667 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 FSD1Q9BTV5 496 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 CTNNA3Q9UI47 895 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
UBAP1-201ENST00000297661 EPB41L2O43491 1005 aaKnown RBP18.46■□□□□ 0.55
UBAP1-201ENST00000297661 GABPB1Q06547 395 aaPredicted RBP18.46■□□□□ 0.55
UBAP1-201ENST00000297661 FAM182BQ5T319 152 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 CREB3L3Q68CJ9 461 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 MYD88Q99836 296 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 TPCN1Q9ULQ1 816 aa18.46■□□□□ 0.55
UBAP1-201ENST00000297661 NECTIN1Q15223 517 aa18.45■□□□□ 0.54
UBAP1-201ENST00000297661 ERC1Q8IUD2 1116 aa18.45■□□□□ 0.54
UBAP1-201ENST00000297661 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
UBAP1-201ENST00000297661 COPS6Q7L5N1 327 aa18.45■□□□□ 0.54
UBAP1-201ENST00000297661 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
UBAP1-201ENST00000297661 GIMAP6Q6P9H5 292 aa18.44■□□□□ 0.54
UBAP1-201ENST00000297661 ZSWIM6Q9HCJ5 1215 aa18.44■□□□□ 0.54
UBAP1-201ENST00000297661 MTMR6Q9Y217 621 aa18.44■□□□□ 0.54
UBAP1-201ENST00000297661 DDX58O95786 925 aaKnown RBP18.44■□□□□ 0.54
UBAP1-201ENST00000297661 STK3Q13188 491 aa18.44■□□□□ 0.54
UBAP1-201ENST00000297661 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
UBAP1-201ENST00000297661 ZNF589Q86UQ0 364 aaPredicted RBP18.44■□□□□ 0.54
UBAP1-201ENST00000297661 ZKSCAN1P17029 563 aaPredicted RBP18.43■□□□□ 0.54
UBAP1-201ENST00000297661 VPS53Q5VIR6 699 aa18.43■□□□□ 0.54
UBAP1-201ENST00000297661 FUCA2Q9BTY2 467 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms