RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 RUFY2Q8WXA3 655 aa16.18■□□□□ 0.18
TTC39B-201ENST00000297615 EVI5LQ96CN4 794 aa16.18■□□□□ 0.18
TTC39B-201ENST00000297615 MCM2P49736 904 aa16.17■□□□□ 0.18
TTC39B-201ENST00000297615 BICDL1Q6ZP65 573 aa16.17■□□□□ 0.18
TTC39B-201ENST00000297615 PIGBQ92521 554 aa16.17■□□□□ 0.18
TTC39B-201ENST00000297615 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
TTC39B-201ENST00000297615 LIMCH1Q9UPQ0 1083 aa16.17■□□□□ 0.18
TTC39B-201ENST00000297615 R3HCC1Q9Y3T6 440 aaKnown RBP16.17■□□□□ 0.18
TTC39B-201ENST00000297615 SLC27A2O14975 620 aa16.16■□□□□ 0.18
TTC39B-201ENST00000297615 ZNF445P59923 1031 aa16.16■□□□□ 0.18
TTC39B-201ENST00000297615 CCDC171Q6TFL3 1326 aa16.16■□□□□ 0.18
TTC39B-201ENST00000297615 RBM10P98175 930 aaKnown RBP16.16■□□□□ 0.18
TTC39B-201ENST00000297615 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
TTC39B-201ENST00000297615 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
TTC39B-201ENST00000297615 A0A087WWV3 80 aa16.15■□□□□ 0.18
TTC39B-201ENST00000297615 CLEC17AQ6ZS10 378 aa16.15■□□□□ 0.18
TTC39B-201ENST00000297615 ZSCAN30Q86W11 494 aa16.15■□□□□ 0.18
TTC39B-201ENST00000297615 ERC1Q8IUD2 1116 aa16.15■□□□□ 0.18
TTC39B-201ENST00000297615 HCLS1P14317 486 aaPredicted RBP16.15■□□□□ 0.18
TTC39B-201ENST00000297615 LARP1BQ659C4 914 aaKnown RBP16.15■□□□□ 0.18
TTC39B-201ENST00000297615 GIMAP6Q6P9H5 292 aa16.15■□□□□ 0.18
TTC39B-201ENST00000297615 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
TTC39B-201ENST00000297615 MST1RQ04912 1400 aa16.15■□□□□ 0.18
TTC39B-201ENST00000297615 CUL4AQ13619 759 aa16.15■□□□□ 0.18
TTC39B-201ENST00000297615 WDR33Q9C0J8 1336 aaKnown RBP16.14■□□□□ 0.17
TTC39B-201ENST00000297615 STX6O43752 255 aa16.14■□□□□ 0.17
TTC39B-201ENST00000297615 ANAPC15P60006 121 aa16.14■□□□□ 0.17
TTC39B-201ENST00000297615 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
TTC39B-201ENST00000297615 SCARF1Q14162 830 aa16.14■□□□□ 0.17
TTC39B-201ENST00000297615 CCDC57Q2TAC2 916 aa16.14■□□□□ 0.17
TTC39B-201ENST00000297615 BRF1Q92994 677 aa16.14■□□□□ 0.17
TTC39B-201ENST00000297615 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
TTC39B-201ENST00000297615 APPP05067 770 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 RXRAP19793 462 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 OTUD7BQ6GQQ9 843 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 PLBD2Q8NHP8 589 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 USP25Q9UHP3 1055 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 TAF5LO75529 589 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 INCENPQ9NQS7 918 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 WTIPA6NIX2 430 aaPredicted RBP16.13■□□□□ 0.17
TTC39B-201ENST00000297615 MBD3O95983 291 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 IFIT1P09914 478 aaKnown RBP16.13■□□□□ 0.17
TTC39B-201ENST00000297615 DNTTIP2Q5QJE6 756 aaKnown RBP16.13■□□□□ 0.17
TTC39B-201ENST00000297615 CDC37L1Q7L3B6 337 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 ERCC4Q92889 916 aaPredicted RBP16.13■□□□□ 0.17
TTC39B-201ENST00000297615 FTOQ9C0B1 505 aaKnown RBP eCLIP16.13■□□□□ 0.17
TTC39B-201ENST00000297615 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
TTC39B-201ENST00000297615 EP400Q96L91 3159 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 LRP10Q7Z4F1 713 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 GJB4Q9NTQ9 266 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 ZBTB1Q9Y2K1 713 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 SLC4A8Q2Y0W8 1093 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 CCDC144CPQ8IYA2 1237 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 TCHHQ07283 1943 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 TTC41PQ6P2S7 1318 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 WDR17Q8IZU2 1322 aa16.12■□□□□ 0.17
TTC39B-201ENST00000297615 RFX5P48382 616 aaPredicted RBP16.11■□□□□ 0.17
TTC39B-201ENST00000297615 FOXO4P98177 505 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 ST3GAL1Q11201 340 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 CKAP2LQ8IYA6 745 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 C17orf53Q8N3J3 647 aaPredicted RBP16.11■□□□□ 0.17
TTC39B-201ENST00000297615 ZSCAN22P10073 491 aaPredicted RBP16.11■□□□□ 0.17
TTC39B-201ENST00000297615 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 NECTIN1Q15223 517 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 Q6ZUG5 572 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 PPP1R9BQ96SB3 815 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 CEP126Q9P2H0 1117 aa16.11■□□□□ 0.17
TTC39B-201ENST00000297615 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
TTC39B-201ENST00000297615 MTX1Q13505 466 aa16.1■□□□□ 0.17
TTC39B-201ENST00000297615 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
TTC39B-201ENST00000297615 CNNM1Q9NRU3 951 aa16.1■□□□□ 0.17
TTC39B-201ENST00000297615 JAG2Q9Y219 1238 aa16.1■□□□□ 0.17
TTC39B-201ENST00000297615 MED1Q15648 1581 aaPredicted RBP16.1■□□□□ 0.17
TTC39B-201ENST00000297615 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
TTC39B-201ENST00000297615 INTS4Q96HW7 963 aaKnown RBP16.1■□□□□ 0.17
TTC39B-201ENST00000297615 TTC14Q96N46 770 aa16.1■□□□□ 0.17
TTC39B-201ENST00000297615 MARF1Q9Y4F3 1742 aaKnown RBP16.1■□□□□ 0.17
TTC39B-201ENST00000297615 CYP21A2P08686 494 aa16.1■□□□□ 0.17
TTC39B-201ENST00000297615 LDHAL6AQ6ZMR3 332 aa16.1■□□□□ 0.17
TTC39B-201ENST00000297615 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
TTC39B-201ENST00000297615 SYAP1Q96A49 352 aaPredicted RBP16.1■□□□□ 0.17
TTC39B-201ENST00000297615 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
TTC39B-201ENST00000297615 GREM2Q9H772 168 aa16.09■□□□□ 0.17
TTC39B-201ENST00000297615 METTL24Q5JXM2 366 aa16.09■□□□□ 0.17
TTC39B-201ENST00000297615 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
TTC39B-201ENST00000297615 COL15A1P39059 1388 aa16.09■□□□□ 0.17
TTC39B-201ENST00000297615 TOMM22Q9NS69 142 aa16.08■□□□□ 0.17
TTC39B-201ENST00000297615 PAG1Q9NWQ8 432 aa16.08■□□□□ 0.17
TTC39B-201ENST00000297615 PCDH11XQ9BZA7 1347 aa16.08■□□□□ 0.17
TTC39B-201ENST00000297615 PCDH11YQ9BZA8 1340 aa16.08■□□□□ 0.17
TTC39B-201ENST00000297615 KCNQ2O43526 872 aa16.08■□□□□ 0.16
TTC39B-201ENST00000297615 PRKCSHP14314 528 aaPredicted RBP16.08■□□□□ 0.16
TTC39B-201ENST00000297615 ZAP70P43403 619 aa16.08■□□□□ 0.16
TTC39B-201ENST00000297615 HSP90AA2PQ14568 343 aaPredicted RBP16.08■□□□□ 0.16
TTC39B-201ENST00000297615 TTC39AQ5SRH9 613 aa16.08■□□□□ 0.16
TTC39B-201ENST00000297615 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
TTC39B-201ENST00000297615 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms