RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 GJB2P29033 226 aa11.14□□□□□ -0.63
UBLCP1-201ENST00000296786 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
UBLCP1-201ENST00000296786 ZSCAN31Q96LW9 406 aaPredicted RBP11.14□□□□□ -0.63
UBLCP1-201ENST00000296786 SH2B1Q9NRF2 756 aaPredicted RBP11.14□□□□□ -0.63
UBLCP1-201ENST00000296786 DTNBO60941 627 aa11.14□□□□□ -0.63
UBLCP1-201ENST00000296786 ME3Q16798 604 aa11.14□□□□□ -0.63
UBLCP1-201ENST00000296786 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
UBLCP1-201ENST00000296786 NDUFB9Q9Y6M9 179 aa11.14□□□□□ -0.63
UBLCP1-201ENST00000296786 F13A1P00488 732 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 ST3GAL1Q11201 340 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 LMBR1LQ6UX01 489 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 TMEM87AQ8NBN3 555 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 ITGB4P16144 1822 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 PSMA5P28066 241 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 TTLL7Q6ZT98 887 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 SYAP1Q96A49 352 aaPredicted RBP11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 DBNDD2Q9BQY9 259 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 TPCN1Q9ULQ1 816 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 CHMP3Q9Y3E7 222 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 TAF6LQ9Y6J9 622 aa11.13□□□□□ -0.63
UBLCP1-201ENST00000296786 FOXO4P98177 505 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 ZNF609O15014 1411 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 H7C1W4 665 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 TAF5LO75529 589 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 A1BGP04217 495 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 BLOC1S2Q6QNY1 142 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 NECAB1Q8N987 351 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 ATP6V1DQ9Y5K8 247 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 SOS2Q07890 1332 aaPredicted RBP11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 RFX7Q2KHR2 1363 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 MYH7P12883 1935 aa11.12□□□□□ -0.63
UBLCP1-201ENST00000296786 IL2RBP14784 551 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 MTMR6Q9Y217 621 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 MYH15Q9Y2K3 1946 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 MYH3P11055 1940 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 CHGBP05060 677 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 RPS6KB1P23443 525 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 PDLIM2Q96JY6 352 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 HAUS7Q99871 368 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 ZBTB3Q9H5J0 574 aa11.11□□□□□ -0.63
UBLCP1-201ENST00000296786 FIBPO43427 364 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 TSGA10IPQ3SY00 556 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 DDX46Q7L014 1031 aaKnown RBP11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 ATG9AQ7Z3C6 839 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 SEC62Q99442 399 aaKnown RBP11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 CCDC9Q9Y3X0 531 aaKnown RBP11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 SPEF2Q9C093 1822 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 TNS2Q63HR2 1409 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 PHF14O94880 888 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 TOB2Q14106 344 aaPredicted RBP11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 ANKRD1Q15327 319 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 CCDC129Q6ZRS4 1044 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 RNF214Q8ND24 703 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 CARD10Q9BWT7 1032 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 TSPY26PQ9H489 355 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 SLAIN2Q9P270 581 aa11.1□□□□□ -0.63
UBLCP1-201ENST00000296786 NHSL1Q5SYE7 1610 aa11.09□□□□□ -0.63
UBLCP1-201ENST00000296786 UBE2HP62256 183 aa11.09□□□□□ -0.63
UBLCP1-201ENST00000296786 DNM1Q05193 864 aaKnown RBP11.09□□□□□ -0.63
UBLCP1-201ENST00000296786 ALDH8A1Q9H2A2 487 aaPredicted RBP11.09□□□□□ -0.63
UBLCP1-201ENST00000296786 ZSCAN30Q86W11 494 aa11.09□□□□□ -0.63
UBLCP1-201ENST00000296786 CCDC191Q8NCU4 936 aa11.09□□□□□ -0.63
UBLCP1-201ENST00000296786 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
UBLCP1-201ENST00000296786 ANKRD36CQ5JPF3 1778 aa11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 PALLDQ8WX93 1383 aa11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 MCMDC2Q4G0Z9 681 aa11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 CCDC183Q5T5S1 534 aa11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 LARP1BQ659C4 914 aaKnown RBP11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 KBTBD3Q8NAB2 608 aa11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 IL15P40933 162 aaPredicted RBP11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 TIMM10P62072 90 aa11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 KRT32Q14532 448 aa11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 LRRC24Q50LG9 513 aa11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 ZNF594Q96JF6 807 aaPredicted RBP11.08□□□□□ -0.64
UBLCP1-201ENST00000296786 SH3TC1Q8TE82 1336 aa11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 CYP21A2P08686 494 aa11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 STK3Q13188 491 aa11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 HS1BP3Q53T59 392 aa11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 GPR108Q9NPR9 543 aa11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 PAG1Q9NWQ8 432 aa11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 U3KPZ7 1027 aaPredicted RBP11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 MYO5AQ9Y4I1 1855 aaKnown RBP11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 NUP98P52948 1817 aa11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 ZNF335Q9H4Z2 1342 aaPredicted RBP11.07□□□□□ -0.64
UBLCP1-201ENST00000296786 GOLIM4O00461 696 aa11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 EVA1CP58658 441 aa11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms