RNA–Protein interactions for RNA: ENST00000295874.14

PTPRG-201, Transcript of protein tyrosine phosphatase, receptor type G, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRG, Length 4,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Dendrite, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRG-201ENST00000295874 UBAP1LF5GYI3 381 aa14.33□□□□□ -0.11
PTPRG-201ENST00000295874 AXDND1Q5T1B0 1012 aaPredicted RBP14.33□□□□□ -0.11
PTPRG-201ENST00000295874 TAF3Q5VWG9 929 aa14.33□□□□□ -0.11
PTPRG-201ENST00000295874 SNRPA1P09661 255 aaKnown RBP14.33□□□□□ -0.12
PTPRG-201ENST00000295874 EIF4A1P60842 406 aaKnown RBP14.33□□□□□ -0.12
PTPRG-201ENST00000295874 ANKRD13DQ6ZTN6 518 aa14.33□□□□□ -0.12
PTPRG-201ENST00000295874 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.12
PTPRG-201ENST00000295874 NBPF7P0C2Y1 421 aaPredicted RBP14.33□□□□□ -0.12
PTPRG-201ENST00000295874 NECAB1Q8N987 351 aa14.33□□□□□ -0.12
PTPRG-201ENST00000295874 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
PTPRG-201ENST00000295874 PKP1Q13835 747 aa14.33□□□□□ -0.12
PTPRG-201ENST00000295874 DHX8Q14562 1220 aaKnown RBP14.33□□□□□ -0.12
PTPRG-201ENST00000295874 NACAP1Q9BZK3 213 aa14.33□□□□□ -0.12
PTPRG-201ENST00000295874 ADGRB2O60241 1585 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 REREQ9P2R6 1566 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 COL3A1P02461 1466 aaPredicted RBP14.32□□□□□ -0.12
PTPRG-201ENST00000295874 CCDC171Q6TFL3 1326 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 DDX21Q9NR30 783 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPRG-201ENST00000295874 NMIQ13287 307 aaPredicted RBP14.32□□□□□ -0.12
PTPRG-201ENST00000295874 SEPT7Q16181 437 aaKnown RBP14.32□□□□□ -0.12
PTPRG-201ENST00000295874 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
PTPRG-201ENST00000295874 CEP57L1Q8IYX8 460 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 KIF2CQ99661 725 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 STARD3NLO95772 234 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 CREB3L3Q68CJ9 461 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 GIMAP6Q6P9H5 292 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 UBE3BQ7Z3V4 1068 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 TMEM63CQ9P1W3 806 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 CAVIN2O95810 425 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 GCP02774 474 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 DNM1Q05193 864 aaKnown RBP14.32□□□□□ -0.12
PTPRG-201ENST00000295874 RUFY3Q7L099 469 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 XAGE3Q8WTP9 111 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 PALD1Q9ULE6 856 aa14.32□□□□□ -0.12
PTPRG-201ENST00000295874 FRMPD1Q5SYB0 1578 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 CTAGE5O15320 804 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 CDK5RAP3Q96JB5 506 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 LGR6Q9HBX8 967 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 ARHGEF28Q8N1W1 1705 aaKnown RBP14.31□□□□□ -0.12
PTPRG-201ENST00000295874 GOLGA6L10A6NI86 522 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 FKBP4Q02790 459 aaKnown RBP eCLIP14.31□□□□□ -0.123e-8■□□□□ 9.8
PTPRG-201ENST00000295874 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 TFIP11Q9UBB9 837 aaKnown RBP14.31□□□□□ -0.12
PTPRG-201ENST00000295874 NLRP1Q9C000 1473 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 DYNC1I1O14576 645 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 CLEC17AQ6ZS10 378 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 COPS6Q7L5N1 327 aa14.31□□□□□ -0.12
PTPRG-201ENST00000295874 CCP110O43303 1012 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 RGS12O14924 1447 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 IFIT1P09914 478 aaKnown RBP14.3□□□□□ -0.12
PTPRG-201ENST00000295874 ZSCAN16Q9H4T2 348 aaPredicted RBP14.3□□□□□ -0.12
PTPRG-201ENST00000295874 TRIM21P19474 475 aaKnown RBP14.3□□□□□ -0.12
PTPRG-201ENST00000295874 CUL4AQ13619 759 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 WDR78Q5VTH9 848 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 OLFM4Q6UX06 510 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 AKAP2Q9Y2D5 859 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 ANKRD62A6NC57 917 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
PTPRG-201ENST00000295874 CKAP2LQ8IYA6 745 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 TM6SF1Q9BZW5 370 aa14.3□□□□□ -0.12
PTPRG-201ENST00000295874 NBPF6Q5VWK0 638 aa14.29□□□□□ -0.12
PTPRG-201ENST00000295874 PRIMPOLQ96LW4 560 aa14.29□□□□□ -0.12
PTPRG-201ENST00000295874 NBPF4Q96M43 638 aa14.29□□□□□ -0.12
PTPRG-201ENST00000295874 KRT18P05783 430 aaKnown RBP14.29□□□□□ -0.12
PTPRG-201ENST00000295874 BICDL1Q6ZP65 573 aa14.29□□□□□ -0.12
PTPRG-201ENST00000295874 FAM200AQ8TCP9 573 aa14.29□□□□□ -0.12
PTPRG-201ENST00000295874 LUC7LQ9NQ29 371 aaKnown RBP14.29□□□□□ -0.12
PTPRG-201ENST00000295874 GPT2Q8TD30 523 aa14.28□□□□□ -0.12
PTPRG-201ENST00000295874 TXLNAP40222 546 aa14.28□□□□□ -0.12
PTPRG-201ENST00000295874 BEND3Q5T5X7 828 aa14.28□□□□□ -0.12
PTPRG-201ENST00000295874 BICC1Q9H694 974 aaKnown RBP14.28□□□□□ -0.12
PTPRG-201ENST00000295874 ANO10Q9NW15 660 aa14.28□□□□□ -0.12
PTPRG-201ENST00000295874 CCDC112Q8NEF3 446 aa14.28□□□□□ -0.12
PTPRG-201ENST00000295874 NPHP3Q7Z494 1330 aa14.28□□□□□ -0.12
PTPRG-201ENST00000295874 CDKL5O76039 1030 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 SMC2O95347 1197 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 SLC39A6Q13433 755 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 TCEANC2Q96MN5 208 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 ATP5J2-PTCD1G3V325 749 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 PTCD1O75127 700 aaKnown RBP14.27□□□□□ -0.12
PTPRG-201ENST00000295874 CPA1P15085 419 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.12
PTPRG-201ENST00000295874 TERF1P54274 439 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 SMARCE1Q969G3 411 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 CDC42BPGQ6DT37 1551 aa14.27□□□□□ -0.12
PTPRG-201ENST00000295874 IGHMBP2P38935 993 aaKnown RBP14.27□□□□□ -0.13
PTPRG-201ENST00000295874 SYCP1Q15431 976 aa14.27□□□□□ -0.13
PTPRG-201ENST00000295874 MCMDC2Q4G0Z9 681 aa14.27□□□□□ -0.13
PTPRG-201ENST00000295874 NBPF14Q5TI25 921 aa14.27□□□□□ -0.13
PTPRG-201ENST00000295874 ZNF165P49910 485 aa14.27□□□□□ -0.13
PTPRG-201ENST00000295874 CWC25Q9NXE8 425 aaPredicted RBP14.27□□□□□ -0.13
PTPRG-201ENST00000295874 SHPRHQ149N8 1683 aa14.27□□□□□ -0.13
PTPRG-201ENST00000295874 GOLIM4O00461 696 aa14.26□□□□□ -0.13
PTPRG-201ENST00000295874 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
PTPRG-201ENST00000295874 NOLC1Q14978 699 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPRG-201ENST00000295874 FILIP1LQ4L180 1135 aa14.26□□□□□ -0.13
PTPRG-201ENST00000295874 SOGA3Q5TF21 947 aa14.26□□□□□ -0.13
PTPRG-201ENST00000295874 DEF6Q9H4E7 631 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms