RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 SLC10A5Q5PT55 438 aa13.86□□□□□ -0.19
USP41-201ENST00000292729 GIGYF2Q6Y7W6 1299 aaKnown RBP13.86□□□□□ -0.19
USP41-201ENST00000292729 SP8Q8IXZ3 490 aa13.86□□□□□ -0.19
USP41-201ENST00000292729 MPNDQ8N594 471 aa13.86□□□□□ -0.19
USP41-201ENST00000292729 PNISRQ8TF01 805 aaKnown RBP13.86□□□□□ -0.19
USP41-201ENST00000292729 TTLL7Q6ZT98 887 aa13.85□□□□□ -0.19
USP41-201ENST00000292729 USP48Q86UV5 1035 aa13.85□□□□□ -0.19
USP41-201ENST00000292729 REM2Q8IYK8 340 aaPredicted RBP13.85□□□□□ -0.19
USP41-201ENST00000292729 C2orf69Q8N8R5 385 aa13.85□□□□□ -0.19
USP41-201ENST00000292729 TRPM4Q8TD43 1214 aa13.85□□□□□ -0.19
USP41-201ENST00000292729 DPF2Q92785 391 aa13.85□□□□□ -0.19
USP41-201ENST00000292729 ZBTB3Q9H5J0 574 aa13.85□□□□□ -0.19
USP41-201ENST00000292729 GBA2Q9HCG7 927 aaPredicted RBP13.85□□□□□ -0.19
USP41-201ENST00000292729 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
USP41-201ENST00000292729 DLG5Q8TDM6 1919 aa13.85□□□□□ -0.19
USP41-201ENST00000292729 ABCC4O15439 1325 aa13.85□□□□□ -0.19
USP41-201ENST00000292729 RAD17O75943 681 aa13.84□□□□□ -0.19
USP41-201ENST00000292729 KIF23Q02241 960 aaPredicted RBP13.84□□□□□ -0.19
USP41-201ENST00000292729 DCTN1Q14203 1278 aa13.84□□□□□ -0.19
USP41-201ENST00000292729 C3orf67Q6ZVT6 689 aa13.84□□□□□ -0.19
USP41-201ENST00000292729 CTU1Q7Z7A3 348 aaKnown RBP13.84□□□□□ -0.19
USP41-201ENST00000292729 SLC51AQ86UW1 340 aa13.84□□□□□ -0.19
USP41-201ENST00000292729 RNF186Q9NXI6 227 aa13.84□□□□□ -0.19
USP41-201ENST00000292729 ERBB4Q15303 1308 aa13.84□□□□□ -0.19
USP41-201ENST00000292729 TRPA1O75762 1119 aa13.83□□□□□ -0.2
USP41-201ENST00000292729 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
USP41-201ENST00000292729 MYL6BP14649 208 aa13.83□□□□□ -0.2
USP41-201ENST00000292729 ZNF157P51786 506 aaPredicted RBP13.83□□□□□ -0.2
USP41-201ENST00000292729 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP41-201ENST00000292729 MICALL2Q8IY33 904 aa13.83□□□□□ -0.2
USP41-201ENST00000292729 LRRC37AA6NMS7 1700 aa13.82□□□□□ -0.2
USP41-201ENST00000292729 DDX60Q8IY21 1712 aaKnown RBP13.82□□□□□ -0.2
USP41-201ENST00000292729 PKN2Q16513 984 aaKnown RBP13.82□□□□□ -0.2
USP41-201ENST00000292729 KRT26Q7Z3Y9 468 aa13.82□□□□□ -0.2
USP41-201ENST00000292729 TMC4Q7Z404 712 aa13.82□□□□□ -0.2
USP41-201ENST00000292729 UTP14AQ9BVJ6 771 aaKnown RBP13.82□□□□□ -0.2
USP41-201ENST00000292729 DCPSQ96C86 337 aaKnown RBP13.81□□□□□ -0.2
USP41-201ENST00000292729 GCC1Q96CN9 775 aa13.81□□□□□ -0.2
USP41-201ENST00000292729 MIS18AQ9NYP9 233 aa13.81□□□□□ -0.2
USP41-201ENST00000292729 YDJCA8MPS7 323 aa13.8□□□□□ -0.2
USP41-201ENST00000292729 SLC10A3P09131 477 aa13.8□□□□□ -0.2
USP41-201ENST00000292729 RPS12P25398 132 aaKnown RBP13.8□□□□□ -0.2
USP41-201ENST00000292729 EIF4A1P60842 406 aaKnown RBP13.8□□□□□ -0.2
USP41-201ENST00000292729 GRAPQ13588 217 aa13.8□□□□□ -0.2
USP41-201ENST00000292729 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
USP41-201ENST00000292729 SAMD7Q7Z3H4 446 aa13.8□□□□□ -0.2
USP41-201ENST00000292729 GRAPLQ8TC17 118 aaPredicted RBP13.8□□□□□ -0.2
USP41-201ENST00000292729 CSRNP1Q96S65 589 aa13.8□□□□□ -0.2
USP41-201ENST00000292729 TAF1P21675 1872 aa13.8□□□□□ -0.2
USP41-201ENST00000292729 DUOX1Q9NRD9 1551 aa13.79□□□□□ -0.2
USP41-201ENST00000292729 SHTN1A0MZ66 631 aa13.79□□□□□ -0.2
USP41-201ENST00000292729 CNGB1Q14028 1251 aaPredicted RBP13.79□□□□□ -0.2
USP41-201ENST00000292729 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
USP41-201ENST00000292729 PSMD14O00487 310 aa13.78□□□□□ -0.2
USP41-201ENST00000292729 NEFMP07197 916 aa13.78□□□□□ -0.2
USP41-201ENST00000292729 TBC1D10BQ4KMP7 808 aaPredicted RBP13.78□□□□□ -0.2
USP41-201ENST00000292729 HSP90AB3PQ58FF7 597 aa13.78□□□□□ -0.2
USP41-201ENST00000292729 PCGF6Q9BYE7 350 aa13.78□□□□□ -0.2
USP41-201ENST00000292729 HPS5Q9UPZ3 1129 aa13.78□□□□□ -0.2
USP41-201ENST00000292729 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
USP41-201ENST00000292729 WASHC4Q2M389 1173 aa13.77□□□□□ -0.21
USP41-201ENST00000292729 DLK2Q6UY11 383 aa13.77□□□□□ -0.21
USP41-201ENST00000292729 SULF1Q8IWU6 871 aa13.77□□□□□ -0.21
USP41-201ENST00000292729 FKBP1BP68106 108 aa13.76□□□□□ -0.21
USP41-201ENST00000292729 HDAC9Q9UKV0 1011 aa13.76□□□□□ -0.21
USP41-201ENST00000292729 PAPPA2Q9BXP8 1791 aa13.76□□□□□ -0.21
USP41-201ENST00000292729 SH3TC1Q8TE82 1336 aa13.75□□□□□ -0.21
USP41-201ENST00000292729 KIF4BQ2VIQ3 1234 aa13.75□□□□□ -0.21
USP41-201ENST00000292729 RBM26Q5T8P6 1007 aaKnown RBP13.75□□□□□ -0.21
USP41-201ENST00000292729 LRP10Q7Z4F1 713 aa13.75□□□□□ -0.21
USP41-201ENST00000292729 EYA3Q99504 573 aa13.75□□□□□ -0.21
USP41-201ENST00000292729 DBNDD1Q9H9R9 158 aa13.75□□□□□ -0.21
USP41-201ENST00000292729 EGFRP00533 1210 aa13.74□□□□□ -0.21
USP41-201ENST00000292729 HCLS1P14317 486 aaPredicted RBP13.74□□□□□ -0.21
USP41-201ENST00000292729 NOM1Q5C9Z4 860 aaKnown RBP13.74□□□□□ -0.21
USP41-201ENST00000292729 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
USP41-201ENST00000292729 RASAL3Q86YV0 1011 aa13.74□□□□□ -0.21
USP41-201ENST00000292729 CDCA5Q96FF9 252 aa13.74□□□□□ -0.21
USP41-201ENST00000292729 GGA3Q9NZ52 723 aa13.74□□□□□ -0.21
USP41-201ENST00000292729 TRMT112Q9UI30 125 aaKnown RBP13.74□□□□□ -0.21
USP41-201ENST00000292729 NSFL1CQ9UNZ2 370 aaKnown RBP13.74□□□□□ -0.21
USP41-201ENST00000292729 PSME4Q14997 1843 aa13.74□□□□□ -0.21
USP41-201ENST00000292729 ECE2O60344 883 aa13.73□□□□□ -0.21
USP41-201ENST00000292729 PDIA6Q15084 440 aa13.73□□□□□ -0.21
USP41-201ENST00000292729 SCN9AQ15858 1988 aa13.72□□□□□ -0.21
USP41-201ENST00000292729 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
USP41-201ENST00000292729 RIMBP2O15034 1052 aa13.72□□□□□ -0.21
USP41-201ENST00000292729 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
USP41-201ENST00000292729 TCIRG1Q13488 830 aa13.72□□□□□ -0.21
USP41-201ENST00000292729 FBXO46Q6PJ61 603 aaPredicted RBP13.72□□□□□ -0.21
USP41-201ENST00000292729 ZNF296Q8WUU4 475 aaPredicted RBP13.72□□□□□ -0.21
USP41-201ENST00000292729 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
USP41-201ENST00000292729 ZNF609O15014 1411 aa13.72□□□□□ -0.21
USP41-201ENST00000292729 RTL9Q8NET4 1388 aa13.71□□□□□ -0.21
USP41-201ENST00000292729 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
USP41-201ENST00000292729 NECTIN2Q92692 538 aa13.71□□□□□ -0.21
USP41-201ENST00000292729 POLLQ9UGP5 575 aa13.71□□□□□ -0.21
USP41-201ENST00000292729 PITPNM2Q9BZ72 1349 aa13.7□□□□□ -0.22
USP41-201ENST00000292729 EIF2S2P20042 333 aaKnown RBP13.7□□□□□ -0.22
USP41-201ENST00000292729 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms