RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 RBM33Q96EV2 1170 aaKnown RBP10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 KCND1Q9NSA2 647 aa10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 TBX22Q9Y458 520 aa10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 TBC1D8O95759 1140 aa10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 ATP8B2P98198 1209 aa10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 PRPF40BQ6NWY9 871 aaKnown RBP10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 LARP1Q6PKG0 1096 aaKnown RBP10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 TXLNBQ8N3L3 684 aa10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 ERCC4Q92889 916 aaPredicted RBP10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 TCEANC2Q96MN5 208 aa10.79□□□□□ -0.68
HMGCLL1-201ENST00000274901 CPS1P31327 1500 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 LOC102724159A0A0B4J2E5 919 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 EPB41L2O43491 1005 aaKnown RBP10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 NEMFO60524 1076 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 PWP2Q15269 919 aaKnown RBP10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 VPS53Q5VIR6 699 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 RNF20Q5VTR2 975 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 CCDC34Q96HJ3 373 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 NPHP3Q7Z494 1330 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 CASQ1P31415 396 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 ARMCX5Q6P1M9 558 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 BICD2Q8TD16 824 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.78□□□□□ -0.68
HMGCLL1-201ENST00000274901 GOLGA6L4A6NEF3 574 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 GOLGA6L19H0YKK7 550 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 KCNA6P17658 529 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 CCT4P50991 539 aaKnown RBP10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 TMCO3Q6UWJ1 677 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 FBXW7Q969H0 707 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 CEP170BQ9Y4F5 1589 aaPredicted RBP10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 AOX1Q06278 1338 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 HTATSF1O43719 755 aaKnown RBP10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 FOXR1Q6PIV2 292 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 SRLQ86TD4 932 aa10.77□□□□□ -0.69
HMGCLL1-201ENST00000274901 ATP7BP35670 1465 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 TADA3O75528 432 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 TPM4P67936 248 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 TEX35Q5T0J7 233 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 DDX11Q96FC9 970 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 FTOQ9C0B1 505 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 GOLPH3LQ9H4A5 285 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 YY1AP1Q9H869 796 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 RRP15Q9Y3B9 282 aaKnown RBP10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 H3BQF6 201 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 ANKLE2Q86XL3 938 aa10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 SCAND2PQ9GZW5 306 aaPredicted RBP10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 GEMIN8Q9NWZ8 242 aaKnown RBP10.76□□□□□ -0.69
HMGCLL1-201ENST00000274901 ACEP12821 1306 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 GTF2A1P52655 376 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 SMC1AQ14683 1233 aaKnown RBP10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 ICE2Q659A1 982 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 PACS2Q86VP3 889 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 AOPEPQ8N6M6 819 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 CYP46A1Q9Y6A2 500 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 CRYBG1Q9Y4K1 1723 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 CEBPZQ03701 1054 aaKnown RBP10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 CC2D1AQ6P1N0 951 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 UBXN4Q92575 508 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 CARD6Q9BX69 1037 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 OSBPL5Q9H0X9 879 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 DNAI1Q9UI46 699 aa10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 XRN1Q8IZH2 1706 aaKnown RBP10.75□□□□□ -0.69
HMGCLL1-201ENST00000274901 CRB1P82279 1406 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 SOS1Q07889 1333 aaPredicted RBP10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 KIF2AO00139 706 aaPredicted RBP10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 JAK2O60674 1132 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 STX1AQ16623 288 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 TRIM65Q6PJ69 517 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 FBXO18Q8NFZ0 1043 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 EDC4Q6P2E9 1401 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 PLEKHG2Q9H7P9 1386 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 LMAN1P49257 510 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 STK3Q13188 491 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 KCNB2Q92953 911 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 TOMM22Q9NS69 142 aa10.74□□□□□ -0.69
HMGCLL1-201ENST00000274901 ADGRL3Q9HAR2 1447 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 ADAMTSL3P82987 1691 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 FOXO3O43524 673 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 RAB11FIP3O75154 756 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 PSEN1P49768 467 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 RESTQ13127 1097 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 NECTIN1Q15223 517 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 SULT6B1Q6IMI4 303 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 COG3Q96JB2 828 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 PARP3Q9Y6F1 533 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 BECN2A8MW95 431 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 TMC6Q7Z403 805 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 GOLGA5Q8TBA6 731 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 RHPN1Q8TCX5 695 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 TM6SF1Q9BZW5 370 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 USP44Q9H0E7 712 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 ADAM21Q9UKJ8 722 aa10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 CHD2O14647 1828 aaKnown RBP10.73□□□□□ -0.69
HMGCLL1-201ENST00000274901 PSDA5PKW4 1024 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms