RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 POLD1P28340 1107 aa14.36□□□□□ -0.11
CDH11-201ENST00000268603 SPAG5Q96R06 1193 aa14.36□□□□□ -0.11
CDH11-201ENST00000268603 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
CDH11-201ENST00000268603 ATP2A1O14983 1001 aa14.35□□□□□ -0.11
CDH11-201ENST00000268603 PPP1R21Q6ZMI0 780 aa14.35□□□□□ -0.11
CDH11-201ENST00000268603 ZSWIM4Q9H7M6 989 aa14.35□□□□□ -0.11
CDH11-201ENST00000268603 SELENOSQ9BQE4 189 aa14.35□□□□□ -0.11
CDH11-201ENST00000268603 GSTO1P78417 241 aa14.35□□□□□ -0.11
CDH11-201ENST00000268603 NOP9Q86U38 636 aaKnown RBP14.35□□□□□ -0.11
CDH11-201ENST00000268603 SMIM23A6NLE4 172 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 FSIP1Q8NA03 581 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 MIPOL1Q8TD10 442 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 AFG3L2Q9Y4W6 797 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 ERCC5P28715 1186 aaPredicted RBP14.34□□□□□ -0.11
CDH11-201ENST00000268603 KIF1BPQ96EK5 621 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 CCDC77Q9BR77 488 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 ARID5AQ03989 594 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 SELENOOQ9BVL4 669 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
CDH11-201ENST00000268603 RTEL1-TNFRSF6BF6WH68 1400 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 HEATR3Q7Z4Q2 680 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 GSDMBQ8TAX9 411 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 MFSD6Q6ZSS7 791 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 SMARCA5O60264 1052 aaPredicted RBP14.34□□□□□ -0.11
CDH11-201ENST00000268603 ZBTB3Q9H5J0 574 aa14.34□□□□□ -0.11
CDH11-201ENST00000268603 PPFIA3O75145 1194 aa14.33□□□□□ -0.11
CDH11-201ENST00000268603 NBPF6Q5VWK0 638 aa14.33□□□□□ -0.11
CDH11-201ENST00000268603 NBPF5PQ86XG9 351 aaPredicted RBP14.33□□□□□ -0.11
CDH11-201ENST00000268603 MSANTD4Q8NCY6 345 aa14.33□□□□□ -0.11
CDH11-201ENST00000268603 NBPF4Q96M43 638 aa14.33□□□□□ -0.11
CDH11-201ENST00000268603 AKR1B10O60218 316 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 RFC1P35251 1148 aaPredicted RBP14.33□□□□□ -0.12
CDH11-201ENST00000268603 TACC3Q9Y6A5 838 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 KIFC2Q96AC6 838 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 CRNKL1Q9BZJ0 848 aaKnown RBP14.33□□□□□ -0.12
CDH11-201ENST00000268603 ANKFY1Q9P2R3 1169 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 ERCC3P19447 782 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 LARP6Q9BRS8 491 aaKnown RBP14.33□□□□□ -0.12
CDH11-201ENST00000268603 GPHNQ9NQX3 736 aaPredicted RBP14.33□□□□□ -0.12
CDH11-201ENST00000268603 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 HMGB1P09429 215 aaKnown RBP14.33□□□□□ -0.12
CDH11-201ENST00000268603 HAND2P61296 217 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.12
CDH11-201ENST00000268603 MICU3Q86XE3 530 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 CLSTN2Q9H4D0 955 aa14.33□□□□□ -0.12
CDH11-201ENST00000268603 ESPNB1AK53 854 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 CDCA7LQ96GN5 454 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 UAP1Q16222 522 aaPredicted RBP14.32□□□□□ -0.12
CDH11-201ENST00000268603 PPP1R42Q7Z4L9 355 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 TRIM7Q9C029 511 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 HARSP12081 509 aaKnown RBP14.32□□□□□ -0.12
CDH11-201ENST00000268603 IARSP41252 1262 aaKnown RBP14.32□□□□□ -0.12
CDH11-201ENST00000268603 SEPT14Q6ZU15 432 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 PPP2R5DQ14738 602 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 FGD6Q6ZV73 1430 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 LRRC9Q6ZRR7 1453 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 FLIIQ13045 1269 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 CCDC114Q96M63 670 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 PPME1Q9Y570 386 aa14.32□□□□□ -0.12
CDH11-201ENST00000268603 BACH1O14867 736 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 GLRX3O76003 335 aaKnown RBP14.31□□□□□ -0.12
CDH11-201ENST00000268603 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDH11-201ENST00000268603 STAT6P42226 847 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 KCNH5Q8NCM2 988 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 SNRKQ9NRH2 765 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 GTF3C6Q969F1 213 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 C6orf50Q9HD87 102 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 DAPK3O43293 454 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 E7EVH7 732 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 ATP2A2P16615 1042 aaKnown RBP14.31□□□□□ -0.12
CDH11-201ENST00000268603 RRAGBQ5VZM2 374 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 MCM10Q7L590 875 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 GOLGA1Q92805 767 aa14.31□□□□□ -0.12
CDH11-201ENST00000268603 ZFYP08048 801 aaPredicted RBP14.3□□□□□ -0.12
CDH11-201ENST00000268603 METAP2P50579 478 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDH11-201ENST00000268603 VPS52Q8N1B4 723 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 GOLIM4O00461 696 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 AFMP43652 599 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 ANKS4BQ8N8V4 417 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 C16orf45Q96MC5 204 aaPredicted RBP14.3□□□□□ -0.12
CDH11-201ENST00000268603 USP16Q9Y5T5 823 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 CEP57Q86XR8 500 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 JDP2Q8WYK2 163 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 RAB11FIP3O75154 756 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 XRCC6P12956 609 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDH11-201ENST00000268603 LDHAL6AQ6ZMR3 332 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 PPP2R1AP30153 589 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 CCDC25Q86WR0 208 aa14.3□□□□□ -0.12
CDH11-201ENST00000268603 GOLGA6L9A6NEM1 432 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 N4BP3O15049 544 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 PPP4R3BQ5MIZ7 849 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 ATRIPQ8WXE1 791 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 TBC1D31Q96DN5 1066 aa14.29□□□□□ -0.12
CDH11-201ENST00000268603 PYM1Q9BRP8 204 aaKnown RBP14.29□□□□□ -0.12
CDH11-201ENST00000268603 ZHX1Q9UKY1 873 aaPredicted RBP14.29□□□□□ -0.12
CDH11-201ENST00000268603 PRPHP41219 470 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms