RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 RAC1P63000 192 aa9.81□□□□□ -0.84
TRA2B-201ENST00000259043 DMGDHQ9UI17 866 aaKnown RBP9.81□□□□□ -0.84
TRA2B-201ENST00000259043 PRMT3O60678 531 aa9.8□□□□□ -0.84
TRA2B-201ENST00000259043 LRP8Q14114 963 aa9.8□□□□□ -0.84
TRA2B-201ENST00000259043 IER5Q5VY09 327 aa9.8□□□□□ -0.84
TRA2B-201ENST00000259043 BTLAQ7Z6A9 289 aa9.8□□□□□ -0.84
TRA2B-201ENST00000259043 MYO19Q96H55 970 aa9.8□□□□□ -0.84
TRA2B-201ENST00000259043 UBE2OQ9C0C9 1292 aaKnown RBP9.8□□□□□ -0.84
TRA2B-201ENST00000259043 KRTAP1-3Q8IUG1 177 aa9.79□□□□□ -0.84
TRA2B-201ENST00000259043 CLP1Q92989 425 aaKnown RBP9.79□□□□□ -0.84
TRA2B-201ENST00000259043 EFCC1Q9HA90 598 aa9.79□□□□□ -0.84
TRA2B-201ENST00000259043 JPH1Q9HDC5 661 aaPredicted RBP9.79□□□□□ -0.84
TRA2B-201ENST00000259043 SLC6A14Q9UN76 642 aa9.79□□□□□ -0.84
TRA2B-201ENST00000259043 TGFBR3LH3BV60 316 aa9.78□□□□□ -0.84
TRA2B-201ENST00000259043 TBC1D8BQ0IIM8 1120 aa9.78□□□□□ -0.84
TRA2B-201ENST00000259043 HIF1AQ16665 826 aa9.78□□□□□ -0.84
TRA2B-201ENST00000259043 KLK14Q9P0G3 267 aa9.78□□□□□ -0.84
TRA2B-201ENST00000259043 CXXC1Q9P0U4 656 aaPredicted RBP9.78□□□□□ -0.84
TRA2B-201ENST00000259043 LRFN2Q9ULH4 789 aa9.78□□□□□ -0.84
TRA2B-201ENST00000259043 IGFLR1Q9H665 355 aa9.77□□□□□ -0.85
TRA2B-201ENST00000259043 TIMELESSQ9UNS1 1208 aa9.77□□□□□ -0.85
TRA2B-201ENST00000259043 GRNP28799 593 aaKnown RBP9.76□□□□□ -0.85
TRA2B-201ENST00000259043 SHISA2Q6UWI4 295 aa9.76□□□□□ -0.85
TRA2B-201ENST00000259043 ERICH6Q7L0X2 663 aa9.76□□□□□ -0.85
TRA2B-201ENST00000259043 NUDT8Q8WV74 236 aa9.76□□□□□ -0.85
TRA2B-201ENST00000259043 TP53INP1Q96A56 240 aa9.76□□□□□ -0.85
TRA2B-201ENST00000259043 PPP1R15AO75807 674 aaPredicted RBP9.75□□□□□ -0.85
TRA2B-201ENST00000259043 AFF1P51825 1210 aaKnown RBP9.75□□□□□ -0.85
TRA2B-201ENST00000259043 DGKZQ13574 1117 aa9.75□□□□□ -0.85
TRA2B-201ENST00000259043 CAPN12Q6ZSI9 719 aa9.75□□□□□ -0.85
TRA2B-201ENST00000259043 COL26A1Q96A83 441 aa9.75□□□□□ -0.85
TRA2B-201ENST00000259043 COX20Q5RI15 118 aa9.74□□□□□ -0.85
TRA2B-201ENST00000259043 PSAPL1Q6NUJ1 521 aa9.74□□□□□ -0.85
TRA2B-201ENST00000259043 ILDR2Q71H61 639 aa9.74□□□□□ -0.85
TRA2B-201ENST00000259043 FMR1NBQ8N0W7 255 aaPredicted RBP9.74□□□□□ -0.85
TRA2B-201ENST00000259043 VTI1AQ96AJ9 217 aa9.74□□□□□ -0.85
TRA2B-201ENST00000259043 KRTAP4-12Q9BQ66 201 aa9.74□□□□□ -0.85
TRA2B-201ENST00000259043 SSBP4Q9BWG4 385 aaPredicted RBP9.74□□□□□ -0.85
TRA2B-201ENST00000259043 USP21Q9UK80 565 aa9.74□□□□□ -0.85
TRA2B-201ENST00000259043 TMEM88BA6NKF7 163 aa9.73□□□□□ -0.85
TRA2B-201ENST00000259043 HYAL3O43820 417 aaPredicted RBP9.73□□□□□ -0.85
TRA2B-201ENST00000259043 C11orf91Q3C1V1 193 aa9.73□□□□□ -0.85
TRA2B-201ENST00000259043 SAP130Q9H0E3 1048 aa9.73□□□□□ -0.85
TRA2B-201ENST00000259043 DNAJB12Q9NXW2 375 aaKnown RBP9.73□□□□□ -0.85
TRA2B-201ENST00000259043 INPP5BP32019 993 aa9.72□□□□□ -0.85
TRA2B-201ENST00000259043 DMRTC2Q8IXT2 367 aaPredicted RBP9.72□□□□□ -0.85
TRA2B-201ENST00000259043 GSX2Q9BZM3 304 aa9.72□□□□□ -0.85
TRA2B-201ENST00000259043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRA2B-201ENST00000259043 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
TRA2B-201ENST00000259043 RGS9O75916 674 aaPredicted RBP9.71□□□□□ -0.86
TRA2B-201ENST00000259043 LCE3BQ5TA77 95 aa9.71□□□□□ -0.86
TRA2B-201ENST00000259043 PNMA5Q96PV4 448 aa9.71□□□□□ -0.86
TRA2B-201ENST00000259043 NAGPAQ9UK23 515 aa9.71□□□□□ -0.86
TRA2B-201ENST00000259043 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.71□□□□□ -0.86
TRA2B-201ENST00000259043 IDH3AP50213 366 aa9.7□□□□□ -0.86
TRA2B-201ENST00000259043 FAM26DQ5JW98 314 aa9.7□□□□□ -0.86
TRA2B-201ENST00000259043 MKNK1Q9BUB5 465 aa9.7□□□□□ -0.86
TRA2B-201ENST00000259043 SUPT5HO00267 1087 aaKnown RBP9.69□□□□□ -0.86
TRA2B-201ENST00000259043 TNFRSF10BO14763 440 aa9.69□□□□□ -0.86
TRA2B-201ENST00000259043 OPLAHO14841 1288 aa9.69□□□□□ -0.86
TRA2B-201ENST00000259043 MICAL2O94851 1124 aa9.69□□□□□ -0.86
TRA2B-201ENST00000259043 ATP2B4P23634 1241 aa9.69□□□□□ -0.86
TRA2B-201ENST00000259043 CCINQ13939 588 aa9.69□□□□□ -0.86
TRA2B-201ENST00000259043 C16orf46Q6P387 395 aa9.69□□□□□ -0.86
TRA2B-201ENST00000259043 DTWD1Q8N5C7 304 aa9.69□□□□□ -0.86
TRA2B-201ENST00000259043 IFT43Q96FT9 208 aa9.69□□□□□ -0.86
TRA2B-201ENST00000259043 PCSK7Q16549 785 aa9.68□□□□□ -0.86
TRA2B-201ENST00000259043 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
TRA2B-201ENST00000259043 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
TRA2B-201ENST00000259043 NFKB1P19838 968 aa9.67□□□□□ -0.86
TRA2B-201ENST00000259043 ARSDP51689 593 aa9.67□□□□□ -0.86
TRA2B-201ENST00000259043 ETFBKMTQ8IXQ9 262 aa9.67□□□□□ -0.86
TRA2B-201ENST00000259043 NAA30Q147X3 362 aaPredicted RBP9.66□□□□□ -0.86
TRA2B-201ENST00000259043 FAM35AQ86V20 835 aa9.66□□□□□ -0.86
TRA2B-201ENST00000259043 FBXO11Q86XK2 927 aa9.66□□□□□ -0.86
TRA2B-201ENST00000259043 TREML1Q86YW5 311 aa9.66□□□□□ -0.86
TRA2B-201ENST00000259043 WFDC12Q8WWY7 111 aa9.66□□□□□ -0.86
TRA2B-201ENST00000259043 FRRS1LQ9P0K9 344 aa9.66□□□□□ -0.86
TRA2B-201ENST00000259043 RNF112Q9ULX5 631 aa9.65□□□□□ -0.86
TRA2B-201ENST00000259043 CARNS1A5YM72 827 aa9.64□□□□□ -0.87
TRA2B-201ENST00000259043 EPB42P16452 691 aa9.64□□□□□ -0.87
TRA2B-201ENST00000259043 SSFA2P28290 1259 aa9.64□□□□□ -0.87
TRA2B-201ENST00000259043 SCNN1AP37088 669 aa9.64□□□□□ -0.87
TRA2B-201ENST00000259043 GRIK5Q16478 980 aa9.64□□□□□ -0.87
TRA2B-201ENST00000259043 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
TRA2B-201ENST00000259043 SEPT3Q9UH03 358 aa9.64□□□□□ -0.87
TRA2B-201ENST00000259043 MAP3K6O95382 1288 aa9.63□□□□□ -0.87
TRA2B-201ENST00000259043 CPB1P15086 417 aa9.63□□□□□ -0.87
TRA2B-201ENST00000259043 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
TRA2B-201ENST00000259043 IREB2P48200 963 aaKnown RBP9.63□□□□□ -0.87
TRA2B-201ENST00000259043 LPIN3Q9BQK8 851 aa9.63□□□□□ -0.87
TRA2B-201ENST00000259043 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
TRA2B-201ENST00000259043 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
TRA2B-201ENST00000259043 NOS3P29474 1203 aa9.62□□□□□ -0.87
TRA2B-201ENST00000259043 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
TRA2B-201ENST00000259043 IGF2-ASQ6U949 168 aa9.62□□□□□ -0.87
TRA2B-201ENST00000259043 ZFATQ9P243 1243 aa9.62□□□□□ -0.87
TRA2B-201ENST00000259043 EGFRP00533 1210 aa9.61□□□□□ -0.87
TRA2B-201ENST00000259043 WFDC8Q8IUA0 241 aa9.61□□□□□ -0.87
TRA2B-201ENST00000259043 TTC9Q92623 222 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms