RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 IL25Q9H293 177 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 ZSCAN16Q9H4T2 348 aaPredicted RBP20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 ZBTB3Q9H5J0 574 aa20.47■□□□□ 0.87
NDFIP1-201ENST00000253814 TPM1P09493 284 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 HSP90AB3PQ58FF7 597 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 EAF2Q96CJ1 260 aaPredicted RBP20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 SUCLG2Q96I99 432 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 ORC3Q9UBD5 711 aaPredicted RBP20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 A0A1B0GVL5 298 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 IDH1O75874 414 aaKnown RBP20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 ALDH1L1O75891 902 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 OTUD7BQ6GQQ9 843 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 MARCKSP29966 332 aaPredicted RBP20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 ZNF75DP51815 510 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 TFCP2Q12800 502 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 ANKRD13DQ6ZTN6 518 aa20.46■□□□□ 0.87
NDFIP1-201ENST00000253814 KCNH5Q8NCM2 988 aa20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 MED14O60244 1454 aa20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 AOX1Q06278 1338 aa20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 GPS2Q13227 327 aa20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 IMMTQ16891 758 aaKnown RBP20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 LMBR1LQ6UX01 489 aa20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 AATKQ6ZMQ8 1374 aa20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 TNRQ92752 1358 aa20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 PTPDC1A2A3K4 754 aa20.45■□□□□ 0.86
NDFIP1-201ENST00000253814 JMYQ8N9B5 988 aa20.44■□□□□ 0.86
NDFIP1-201ENST00000253814 ZSWIM4Q9H7M6 989 aa20.44■□□□□ 0.86
NDFIP1-201ENST00000253814 SBNO1A3KN83 1393 aa20.44■□□□□ 0.86
NDFIP1-201ENST00000253814 ANKRD24Q8TF21 1146 aa20.44■□□□□ 0.86
NDFIP1-201ENST00000253814 SEC62Q99442 399 aaKnown RBP20.44■□□□□ 0.86
NDFIP1-201ENST00000253814 SMTNL1A8MU46 457 aa20.44■□□□□ 0.86
NDFIP1-201ENST00000253814 MCMDC2Q4G0Z9 681 aa20.44■□□□□ 0.86
NDFIP1-201ENST00000253814 ADGRB3O60242 1522 aa20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 CNNM1Q9NRU3 951 aa20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 DNAI1Q9UI46 699 aa20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 ERICH2A1L162 156 aa20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 TMCO3Q6UWJ1 677 aa20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 NUP133Q8WUM0 1156 aa20.43■□□□□ 0.86
NDFIP1-201ENST00000253814 HMGB1P09429 215 aaKnown RBP20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 KLHL10Q6JEL2 608 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 DBNDD2Q9BQY9 259 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 CLSTN2Q9H4D0 955 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 ZSWIM6Q9HCJ5 1215 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 TLR7Q9NYK1 1049 aaKnown RBP20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 ABCC3O15438 1527 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 SSH2Q76I76 1423 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 TIMM10P62072 90 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 BEND3Q5T5X7 828 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 PI4K2BQ8TCG2 481 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 MTMR7Q9Y216 660 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 NEMFO60524 1076 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 AKAP4Q5JQC9 854 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 IFNKQ9P0W0 207 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 CTNNA3Q9UI47 895 aa20.42■□□□□ 0.86
NDFIP1-201ENST00000253814 KLF18A0A0U1RQI7 1052 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 PROSER3Q2NL68 480 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 KIAA1524Q8TCG1 905 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 MRPS27Q92552 414 aaKnown RBP20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 EVA1CP58658 441 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 ZSCAN25Q6NSZ9 544 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 CPLX3Q8WVH0 158 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 MYOM1P52179 1685 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 TSR1Q2NL82 804 aaKnown RBP20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 SYT10Q6XYQ8 523 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 MICU3Q86XE3 530 aa20.41■□□□□ 0.86
NDFIP1-201ENST00000253814 KCNA6P17658 529 aa20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 PROSER2Q86WR7 435 aaPredicted RBP20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 PCMTD1Q96MG8 357 aaPredicted RBP20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 CFAP74Q9C0B2 1584 aa20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 PPRC1Q5VV67 1664 aaKnown RBP20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 PLEKHG3A1L390 1219 aa20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 KRT222Q8N1A0 295 aa20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 MRVI1Q9Y6F6 885 aa20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 ATP10DQ9P241 1426 aa20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 GSDMDP57764 484 aa20.4■□□□□ 0.86
NDFIP1-201ENST00000253814 CAVIN2O95810 425 aa20.39■□□□□ 0.86
NDFIP1-201ENST00000253814 ATP7BP35670 1465 aa20.39■□□□□ 0.86
NDFIP1-201ENST00000253814 CDK12Q9NYV4 1490 aaPredicted RBP20.39■□□□□ 0.86
NDFIP1-201ENST00000253814 PRAMEF22A3QJZ6 481 aa20.39■□□□□ 0.85
NDFIP1-201ENST00000253814 LTKP29376 864 aa20.39■□□□□ 0.85
NDFIP1-201ENST00000253814 GTF2F1P35269 517 aaKnown RBP eCLIP20.39■□□□□ 0.85
NDFIP1-201ENST00000253814 FTOQ9C0B1 505 aaKnown RBP eCLIP20.39■□□□□ 0.85
NDFIP1-201ENST00000253814 TBC1D2BQ9UPU7 963 aa20.39■□□□□ 0.85
NDFIP1-201ENST00000253814 RXRAP19793 462 aa20.39■□□□□ 0.85
NDFIP1-201ENST00000253814 CCP110O43303 1012 aa20.38■□□□□ 0.85
NDFIP1-201ENST00000253814 TM6SF1Q9BZW5 370 aa20.38■□□□□ 0.85
NDFIP1-201ENST00000253814 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.38■□□□□ 0.85
NDFIP1-201ENST00000253814 KIF2AO00139 706 aaPredicted RBP20.38■□□□□ 0.85
NDFIP1-201ENST00000253814 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
NDFIP1-201ENST00000253814 KAT6BQ8WYB5 2073 aa20.38■□□□□ 0.85
NDFIP1-201ENST00000253814 ZNF213O14771 459 aa20.38■□□□□ 0.85
NDFIP1-201ENST00000253814 ELF2Q15723 593 aa20.38■□□□□ 0.85
NDFIP1-201ENST00000253814 SLU7O95391 586 aaKnown RBP20.37■□□□□ 0.85
NDFIP1-201ENST00000253814 CBFA2T2O43439 604 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms