RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CNPY2Q9Y2B0 182 aa23.41■■□□□ 1.34
CDC42EP1-201ENST00000249014 TJP1Q07157 1748 aa23.41■■□□□ 1.34
CDC42EP1-201ENST00000249014 SHANK3Q9BYB0 1731 aa23.41■■□□□ 1.34
CDC42EP1-201ENST00000249014 PAPPAQ13219 1627 aa23.4■■□□□ 1.34
CDC42EP1-201ENST00000249014 TMEM87AQ8NBN3 555 aa23.4■■□□□ 1.34
CDC42EP1-201ENST00000249014 DBNDD2Q9BQY9 259 aa23.4■■□□□ 1.34
CDC42EP1-201ENST00000249014 TPCN1Q9ULQ1 816 aa23.4■■□□□ 1.34
CDC42EP1-201ENST00000249014 H7C1W4 665 aa23.4■■□□□ 1.34
CDC42EP1-201ENST00000249014 F13A1P00488 732 aa23.4■■□□□ 1.34
CDC42EP1-201ENST00000249014 ERVV-2B6SEH9 535 aa23.39■■□□□ 1.33
CDC42EP1-201ENST00000249014 A1BGP04217 495 aa23.39■■□□□ 1.33
CDC42EP1-201ENST00000249014 NECAB1Q8N987 351 aa23.39■■□□□ 1.33
CDC42EP1-201ENST00000249014 CHGBP05060 677 aa23.38■■□□□ 1.33
CDC42EP1-201ENST00000249014 SOS2Q07890 1332 aaPredicted RBP23.38■■□□□ 1.33
CDC42EP1-201ENST00000249014 TAF5LO75529 589 aa23.38■■□□□ 1.33
CDC42EP1-201ENST00000249014 PSMA5P28066 241 aa23.37■■□□□ 1.33
CDC42EP1-201ENST00000249014 TCEANC2Q96MN5 208 aa23.37■■□□□ 1.33
CDC42EP1-201ENST00000249014 ABCA3Q99758 1704 aa23.37■■□□□ 1.33
CDC42EP1-201ENST00000249014 NKX1-1Q15270 411 aaPredicted RBP23.37■■□□□ 1.33
CDC42EP1-201ENST00000249014 RNF20Q5VTR2 975 aa23.37■■□□□ 1.33
CDC42EP1-201ENST00000249014 MTMR6Q9Y217 621 aa23.37■■□□□ 1.33
CDC42EP1-201ENST00000249014 CHMP3Q9Y3E7 222 aa23.37■■□□□ 1.33
CDC42EP1-201ENST00000249014 DNAJC2Q99543 621 aaKnown RBP23.36■■□□□ 1.33
CDC42EP1-201ENST00000249014 ZNF609O15014 1411 aa23.36■■□□□ 1.33
CDC42EP1-201ENST00000249014 BLOC1S2Q6QNY1 142 aa23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 ATG9AQ7Z3C6 839 aa23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 SYAP1Q96A49 352 aaPredicted RBP23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 HAUS7Q99871 368 aa23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 CWC25Q9NXE8 425 aaPredicted RBP23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 IL2RBP14784 551 aa23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 RPS6KB1P23443 525 aa23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 PDLIM2Q96JY6 352 aa23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 ZBTB3Q9H5J0 574 aa23.35■■□□□ 1.33
CDC42EP1-201ENST00000249014 TSGA10IPQ3SY00 556 aa23.34■■□□□ 1.33
CDC42EP1-201ENST00000249014 USPL1Q5W0Q7 1092 aa23.34■■□□□ 1.33
CDC42EP1-201ENST00000249014 SEC62Q99442 399 aaKnown RBP23.34■■□□□ 1.33
CDC42EP1-201ENST00000249014 CARD10Q9BWT7 1032 aa23.34■■□□□ 1.33
CDC42EP1-201ENST00000249014 HMG20BQ9P0W2 317 aa23.34■■□□□ 1.33
CDC42EP1-201ENST00000249014 SLAIN2Q9P270 581 aa23.34■■□□□ 1.33
CDC42EP1-201ENST00000249014 TOB2Q14106 344 aaPredicted RBP23.33■■□□□ 1.33
CDC42EP1-201ENST00000249014 CCDC129Q6ZRS4 1044 aa23.33■■□□□ 1.33
CDC42EP1-201ENST00000249014 DDX46Q7L014 1031 aaKnown RBP23.33■■□□□ 1.33
CDC42EP1-201ENST00000249014 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.33
CDC42EP1-201ENST00000249014 RFX7Q2KHR2 1363 aa23.33■■□□□ 1.33
CDC42EP1-201ENST00000249014 RNF214Q8ND24 703 aa23.33■■□□□ 1.32
CDC42EP1-201ENST00000249014 ATP6V1DQ9Y5K8 247 aa23.33■■□□□ 1.32
CDC42EP1-201ENST00000249014 TNS2Q63HR2 1409 aa23.32■■□□□ 1.32
CDC42EP1-201ENST00000249014 TOGARAM1Q9Y4F4 1720 aa23.32■■□□□ 1.32
CDC42EP1-201ENST00000249014 ALDH8A1Q9H2A2 487 aaPredicted RBP23.32■■□□□ 1.32
CDC42EP1-201ENST00000249014 STRN4Q9NRL3 753 aa23.32■■□□□ 1.32
CDC42EP1-201ENST00000249014 STRCQ7RTU9 1775 aa23.32■■□□□ 1.32
CDC42EP1-201ENST00000249014 FIBPO43427 364 aa23.31■■□□□ 1.32
CDC42EP1-201ENST00000249014 TSPY26PQ9H489 355 aa23.31■■□□□ 1.32
CDC42EP1-201ENST00000249014 DNM1Q05193 864 aaKnown RBP23.31■■□□□ 1.32
CDC42EP1-201ENST00000249014 UBE2HP62256 183 aa23.3■■□□□ 1.32
CDC42EP1-201ENST00000249014 ANKRD1Q15327 319 aa23.3■■□□□ 1.32
CDC42EP1-201ENST00000249014 TPRNQ4KMQ1 711 aa23.3■■□□□ 1.32
CDC42EP1-201ENST00000249014 CCDC191Q8NCU4 936 aa23.3■■□□□ 1.32
CDC42EP1-201ENST00000249014 VPS37CA5D8V6 355 aaPredicted RBP23.3■■□□□ 1.32
CDC42EP1-201ENST00000249014 NEUROD6Q96NK8 337 aa23.3■■□□□ 1.32
CDC42EP1-201ENST00000249014 TIMM10P62072 90 aa23.29■■□□□ 1.32
CDC42EP1-201ENST00000249014 MCMDC2Q4G0Z9 681 aa23.29■■□□□ 1.32
CDC42EP1-201ENST00000249014 LRRC24Q50LG9 513 aa23.29■■□□□ 1.32
CDC42EP1-201ENST00000249014 KBTBD3Q8NAB2 608 aa23.29■■□□□ 1.32
CDC42EP1-201ENST00000249014 ZNF594Q96JF6 807 aaPredicted RBP23.29■■□□□ 1.32
CDC42EP1-201ENST00000249014 PHF14O94880 888 aa23.28■■□□□ 1.32
CDC42EP1-201ENST00000249014 ZSCAN30Q86W11 494 aa23.28■■□□□ 1.32
CDC42EP1-201ENST00000249014 LARP1BQ659C4 914 aaKnown RBP23.28■■□□□ 1.32
CDC42EP1-201ENST00000249014 ZNF335Q9H4Z2 1342 aaPredicted RBP23.27■■□□□ 1.32
CDC42EP1-201ENST00000249014 SLFNL1Q499Z3 407 aa23.27■■□□□ 1.32
CDC42EP1-201ENST00000249014 GPR108Q9NPR9 543 aa23.27■■□□□ 1.32
CDC42EP1-201ENST00000249014 CYP21A2P08686 494 aa23.27■■□□□ 1.32
CDC42EP1-201ENST00000249014 IL15P40933 162 aaPredicted RBP23.27■■□□□ 1.32
CDC42EP1-201ENST00000249014 CCDC183Q5T5S1 534 aa23.27■■□□□ 1.32
CDC42EP1-201ENST00000249014 EYA2O00167 538 aa23.26■■□□□ 1.31
CDC42EP1-201ENST00000249014 KRT32Q14532 448 aa23.26■■□□□ 1.31
CDC42EP1-201ENST00000249014 CDC37L1Q7L3B6 337 aa23.26■■□□□ 1.31
CDC42EP1-201ENST00000249014 U3KPZ7 1027 aaPredicted RBP23.26■■□□□ 1.31
CDC42EP1-201ENST00000249014 PALLDQ8WX93 1383 aa23.26■■□□□ 1.31
CDC42EP1-201ENST00000249014 SH3TC1Q8TE82 1336 aa23.26■■□□□ 1.31
CDC42EP1-201ENST00000249014 GOLIM4O00461 696 aa23.25■■□□□ 1.31
CDC42EP1-201ENST00000249014 EVA1CP58658 441 aa23.25■■□□□ 1.31
CDC42EP1-201ENST00000249014 STK3Q13188 491 aa23.25■■□□□ 1.31
CDC42EP1-201ENST00000249014 NEK1Q96PY6 1258 aa23.25■■□□□ 1.31
CDC42EP1-201ENST00000249014 PAG1Q9NWQ8 432 aa23.25■■□□□ 1.31
CDC42EP1-201ENST00000249014 LAMA4Q16363 1823 aa23.25■■□□□ 1.31
CDC42EP1-201ENST00000249014 PUS3Q9BZE2 481 aaKnown RBP23.25■■□□□ 1.31
CDC42EP1-201ENST00000249014 HS1BP3Q53T59 392 aa23.24■■□□□ 1.31
CDC42EP1-201ENST00000249014 ISCA1Q9BUE6 129 aa23.24■■□□□ 1.31
CDC42EP1-201ENST00000249014 FERMT3Q86UX7 667 aa23.23■■□□□ 1.31
CDC42EP1-201ENST00000249014 TMOD3Q9NYL9 352 aa23.23■■□□□ 1.31
CDC42EP1-201ENST00000249014 A0A1B0GUL7 405 aa23.23■■□□□ 1.31
CDC42EP1-201ENST00000249014 ZNF330Q9Y3S2 320 aaPredicted RBP23.23■■□□□ 1.31
CDC42EP1-201ENST00000249014 CIAO1O76071 339 aa23.22■■□□□ 1.31
CDC42EP1-201ENST00000249014 STOX1Q6ZVD7 989 aa23.22■■□□□ 1.31
CDC42EP1-201ENST00000249014 ATG3Q9NT62 314 aa23.22■■□□□ 1.31
CDC42EP1-201ENST00000249014 PDCP20941 246 aa23.21■■□□□ 1.31
CDC42EP1-201ENST00000249014 TCIRG1Q13488 830 aa23.21■■□□□ 1.31
CDC42EP1-201ENST00000249014 CSPP1Q1MSJ5 1256 aa23.21■■□□□ 1.31
CDC42EP1-201ENST00000249014 FAM173BQ6P4H8 233 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms