RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 RBM46Q8TBY0 533 aaKnown RBP4.57□□□□□ -1.68
UFM1-201ENST00000239878 SLC52A2Q9HAB3 445 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 ATG7O95352 703 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 ZSCAN20P17040 1043 aaPredicted RBP4.57□□□□□ -1.68
UFM1-201ENST00000239878 HIC1Q14526 733 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 LRP10Q7Z4F1 713 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 TRMT2AQ8IZ69 625 aaKnown RBP4.57□□□□□ -1.68
UFM1-201ENST00000239878 NGEFQ8N5V2 710 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 GAS2L2Q8NHY3 880 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 RAPGEF4Q8WZA2 1011 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 PIGBQ92521 554 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 RUNDC1Q96C34 613 aa4.57□□□□□ -1.68
UFM1-201ENST00000239878 IL16Q14005 1332 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 KCNQ2O43526 872 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 HSP90AB1P08238 724 aaKnown RBP4.56□□□□□ -1.68
UFM1-201ENST00000239878 CHMP4CQ96CF2 233 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 LTV1Q96GA3 475 aaPredicted RBP4.56□□□□□ -1.68
UFM1-201ENST00000239878 PANK2Q9BZ23 570 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 PPP1R12CQ9BZL4 782 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 ATG3Q9NT62 314 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 PCDHB8Q9UN66 801 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 COLQQ9Y215 455 aaPredicted RBP4.56□□□□□ -1.68
UFM1-201ENST00000239878 PCDHB13Q9Y5F0 798 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 PALLDQ8WX93 1383 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 HMOX1P09601 288 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 RFX1P22670 979 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 TMPOP42166 694 aaKnown RBP4.56□□□□□ -1.68
UFM1-201ENST00000239878 NAALADL2Q58DX5 795 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 MICAL1Q8TDZ2 1067 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 LRRC4BQ9NT99 713 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 TBC1D2BQ9UPU7 963 aa4.56□□□□□ -1.68
UFM1-201ENST00000239878 ARFGEF2Q9Y6D5 1785 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 CNTNAP4Q9C0A0 1308 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 RAB11FIP3O75154 756 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 SLC27A3Q5K4L6 730 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 NOL8Q76FK4 1167 aaKnown RBP4.55□□□□□ -1.68
UFM1-201ENST00000239878 UCN2Q96RP3 112 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 LGR6Q9HBX8 967 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 POLR3EQ9NVU0 708 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 NUDCQ9Y266 331 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 BRCA1P38398 1863 aaKnown RBP4.55□□□□□ -1.68
UFM1-201ENST00000239878 GNAT3A8MTJ3 354 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 ANP32CO43423 234 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 XRCC6P12956 609 aaKnown RBP eCLIP4.55□□□□□ -1.68
UFM1-201ENST00000239878 PSEN1P49768 467 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 ZNF530Q6P9A1 599 aaPredicted RBP4.55□□□□□ -1.68
UFM1-201ENST00000239878 FAM43BQ6ZT52 329 aaPredicted RBP4.55□□□□□ -1.68
UFM1-201ENST00000239878 KIAA1211Q6ZU35 1233 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 DPH6Q7L8W6 267 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 FAM13BQ9NYF5 915 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 CHL1O00533 1208 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 HDGFL1Q5TGJ6 251 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 LARGE2Q8N3Y3 721 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 ZBTB9Q96C00 473 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 HDAC5Q9UQL6 1122 aa4.55□□□□□ -1.68
UFM1-201ENST00000239878 U2AF1L5P0DN76 240 aaPredicted RBP4.54□□□□□ -1.68
UFM1-201ENST00000239878 MMP14P50281 582 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 U2AF1Q01081 240 aaKnown RBP eCLIP4.54□□□□□ -1.681e-6■□□□□ 10.2
UFM1-201ENST00000239878 FAM182BQ5T319 152 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 AMIGO3Q86WK7 504 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 EXOC8Q8IYI6 725 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 SOS1Q07889 1333 aaPredicted RBP4.54□□□□□ -1.68
UFM1-201ENST00000239878 PTGDRQ13258 359 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 PDE3BQ13370 1112 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 ITPK1Q13572 414 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 PPP1R15BQ5SWA1 713 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 FBXO33Q7Z6M2 555 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 BCL2L13Q9BXK5 485 aa4.54□□□□□ -1.68
UFM1-201ENST00000239878 RIC1Q4ADV7 1423 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 TRIM37O94972 964 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 ZNF827Q17R98 1081 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 DNTTIP2Q5QJE6 756 aaKnown RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 L1TD1Q5T7N2 865 aaKnown RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 RC3H1Q5TC82 1133 aaKnown RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 LINC00116Q8NCU8 138 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 GIPC2Q8TF65 315 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 LRRC37AA6NMS7 1700 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 PALM3A6NDB9 673 aaPredicted RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 ESPNB1AK53 854 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 SSTR3P32745 418 aaPredicted RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 FAM193AP78312 1265 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 LDLRAD1Q5T700 205 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 INTS5Q6P9B9 1019 aaKnown RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 ZNF526Q8TF50 670 aaPredicted RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 BEGAINQ9BUH8 593 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 BACH2Q9BYV9 841 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 IFT57Q9NWB7 429 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 ASAP1Q9ULH1 1129 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 ANKRD31Q8N7Z5 1873 aa4.53□□□□□ -1.68
UFM1-201ENST00000239878 COL11A2P13942 1736 aaPredicted RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 DDX60Q8IY21 1712 aaKnown RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 AFDNP55196 1824 aaKnown RBP4.53□□□□□ -1.68
UFM1-201ENST00000239878 CACNA1FO60840 1977 aa4.53□□□□□ -1.69
UFM1-201ENST00000239878 HOXB7P09629 217 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 ABL2P42684 1182 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 EIF4A1P60842 406 aaKnown RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 TAGLNQ01995 201 aaKnown RBP4.52□□□□□ -1.69
UFM1-201ENST00000239878 TMEM259Q4ZIN3 620 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 MPRIPQ6WCQ1 1025 aa4.52□□□□□ -1.69
UFM1-201ENST00000239878 WDR63Q8IWG1 891 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms