RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 SGSM2O43147 1006 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 SEMA3FQ13275 785 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 ZBTB9Q96C00 473 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 RASSF4Q9H2L5 321 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 ELP1O95163 1332 aa7.47□□□□□ -1.21
SGIP1-201ENST00000237247 CYP2C19P33261 490 aa7.46□□□□□ -1.21
SGIP1-201ENST00000237247 DCTN1Q14203 1278 aa7.46□□□□□ -1.21
SGIP1-201ENST00000237247 RRS1Q15050 365 aaKnown RBP7.46□□□□□ -1.21
SGIP1-201ENST00000237247 USP48Q86UV5 1035 aa7.46□□□□□ -1.21
SGIP1-201ENST00000237247 ZSCAN31Q96LW9 406 aaPredicted RBP7.46□□□□□ -1.21
SGIP1-201ENST00000237247 RSPH14Q9UHP6 348 aa7.46□□□□□ -1.21
SGIP1-201ENST00000237247 BTAF1O14981 1849 aa7.46□□□□□ -1.21
SGIP1-201ENST00000237247 CCDC189A1A4V9 331 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 IGSF3O75054 1194 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 MLECQ14165 292 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 KRT24Q2M2I5 525 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 EP400NLQ6ZTU2 488 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 LSG1Q9H089 658 aaKnown RBP7.46□□□□□ -1.22
SGIP1-201ENST00000237247 SH2B1Q9NRF2 756 aaPredicted RBP7.46□□□□□ -1.22
SGIP1-201ENST00000237247 MAP3K19Q56UN5 1328 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 LRP10Q7Z4F1 713 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 RNF217Q8TC41 542 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 PI4K2BQ8TCG2 481 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 STK31Q9BXU1 1019 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 KIF13BQ9NQT8 1826 aa7.46□□□□□ -1.22
SGIP1-201ENST00000237247 GOLIM4O00461 696 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 KDM4AO75164 1064 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 FBLN1P23142 703 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 FLIIQ13045 1269 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 MTX1Q13505 466 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 NOLC1Q14978 699 aaKnown RBP eCLIP7.45□□□□□ -1.22
SGIP1-201ENST00000237247 F13A1P00488 732 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 C11orf91Q3C1V1 193 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 HSP90AB4PQ58FF6 505 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 SWT1Q5T5J6 900 aaKnown RBP7.45□□□□□ -1.22
SGIP1-201ENST00000237247 TSPYL4Q9UJ04 414 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 LIMCH1Q9UPQ0 1083 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 TCHHQ07283 1943 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.45□□□□□ -1.22
SGIP1-201ENST00000237247 VPS53Q5VIR6 699 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 MCM10Q7L590 875 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 RPAINQ86UA6 219 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 OTUD6BQ8N6M0 293 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 DIAPH3Q9NSV4 1193 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 EP400Q96L91 3159 aa7.45□□□□□ -1.22
SGIP1-201ENST00000237247 RBM43Q6ZSC3 357 aaKnown RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 G2E3Q7L622 706 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 KRT222Q8N1A0 295 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 STAG3Q9UJ98 1225 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 SNX14Q9Y5W7 946 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 RFX7Q2KHR2 1363 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 LAMA4Q16363 1823 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 KIF3CO14782 793 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 MAFGO15525 162 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 CASQ1P31415 396 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 TNNT3P45378 269 aaPredicted RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 RTF1Q92541 710 aaKnown RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 SGSM3Q96HU1 749 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 ANO2Q9NQ90 1003 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 MYH14Q7Z406 1995 aaKnown RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 STX6O43752 255 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 TRDNQ13061 729 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 MTHFSDQ2M296 383 aaKnown RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 KIAA1524Q8TCG1 905 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 KIF1BPQ96EK5 621 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 PSMD1Q99460 953 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 PNMA6EA0A0J9YXQ4 647 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 GOLGA6L6A8MZA4 724 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 GADD45BO75293 160 aaPredicted RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 NBPF6Q5VWK0 638 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 NBPF5PQ86XG9 351 aaPredicted RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 CNTROBQ8N137 903 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
SGIP1-201ENST00000237247 NBPF4Q96M43 638 aa7.44□□□□□ -1.22
SGIP1-201ENST00000237247 DDX60LQ5H9U9 1706 aaKnown RBP7.43□□□□□ -1.22
SGIP1-201ENST00000237247 ADCY5O95622 1261 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 CAVIN2O95810 425 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 TPRNQ4KMQ1 711 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 KIF18AQ8NI77 898 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 ATG3Q9NT62 314 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 EXOC6BQ9Y2D4 811 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 TSC1Q92574 1164 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 ZSWIM6Q9HCJ5 1215 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 GIGYF1O75420 1035 aaPredicted RBP7.43□□□□□ -1.22
SGIP1-201ENST00000237247 CDC25BP30305 580 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 HNRNPH2P55795 449 aaKnown RBP7.43□□□□□ -1.22
SGIP1-201ENST00000237247 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 RUFY2Q8WXA3 655 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 USP44Q9H0E7 712 aa7.43□□□□□ -1.22
SGIP1-201ENST00000237247 KLHL33A6NCF5 533 aa7.42□□□□□ -1.22
SGIP1-201ENST00000237247 PPP1R12AO14974 1030 aaPredicted RBP7.42□□□□□ -1.22
SGIP1-201ENST00000237247 SYT1P21579 422 aa7.42□□□□□ -1.22
SGIP1-201ENST00000237247 SSR1P43307 286 aaKnown RBP7.42□□□□□ -1.22
SGIP1-201ENST00000237247 RUFY3Q7L099 469 aa7.42□□□□□ -1.22
SGIP1-201ENST00000237247 MTMR6Q9Y217 621 aa7.42□□□□□ -1.22
SGIP1-201ENST00000237247 FOCADQ5VW36 1801 aa7.42□□□□□ -1.22
SGIP1-201ENST00000237247 HIP1O00291 1037 aa7.42□□□□□ -1.22
SGIP1-201ENST00000237247 NCBP1Q09161 790 aaKnown RBP7.42□□□□□ -1.22
SGIP1-201ENST00000237247 CC2D2BQ6DHV5 1058 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms