RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DNM1Q05193 864 aaKnown RBP11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 TEFQ10587 303 aa11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 TAF7LQ5H9L4 462 aa11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 NECAB1Q8N987 351 aa11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 IP6K1Q92551 441 aa11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 ST3GAL1Q11201 340 aa11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 GIMAP6Q6P9H5 292 aa11.21□□□□□ -0.62
HLA-DOA-201ENST00000229829 GLRX3O76003 335 aaKnown RBP11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 ZNF530Q6P9A1 599 aaPredicted RBP11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 DRC7Q8IY82 874 aa11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 CLASRPQ8N2M8 674 aaKnown RBP11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 TMEM87AQ8NBN3 555 aa11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 C9orf78Q9NZ63 289 aaPredicted RBP11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 CCDC183Q5T5S1 534 aa11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 FAM227BQ96M60 508 aa11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 TCEANC2Q96MN5 208 aa11.2□□□□□ -0.62
HLA-DOA-201ENST00000229829 ME3Q16798 604 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 ILDR1Q86SU0 546 aaPredicted RBP11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 PDRG1Q9NUG6 133 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 CHMP3Q9Y3E7 222 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 BRCA1P38398 1863 aaKnown RBP11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 PHF14O94880 888 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 MCM5P33992 734 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 FAM173BQ6P4H8 233 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 CCDC8Q9H0W5 538 aaPredicted RBP11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 ECHDC1Q9NTX5 307 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 MTMR6Q9Y217 621 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 RGPD2P0DJD1 1756 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 DUOX1Q9NRD9 1551 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 ADCY5O95622 1261 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 UBE2HP62256 183 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 AACSQ86V21 672 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 TAF6LQ9Y6J9 622 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 V9GYY5 206 aaPredicted RBP11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 TTC41PQ6P2S7 1318 aa11.19□□□□□ -0.62
HLA-DOA-201ENST00000229829 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 IFIT2P09913 472 aaKnown RBP11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 AIMP1Q12904 312 aaKnown RBP11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 KLHDC4Q8TBB5 520 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 KAZALD1Q96I82 304 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 TLR7Q9NYK1 1049 aaKnown RBP11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 USP42Q9H9J4 1324 aaKnown RBP11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 AP5Z1O43299 807 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 SASH1O94885 1247 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 HSP90AB4PQ58FF6 505 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 EAF2Q96CJ1 260 aaPredicted RBP11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 TRIM34Q9BYJ4 488 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 DBF4Q9UBU7 674 aaPredicted RBP11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 FERMT3Q86UX7 667 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 SIL1Q9H173 461 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 TPCN1Q9ULQ1 816 aa11.18□□□□□ -0.62
HLA-DOA-201ENST00000229829 GIGYF1O75420 1035 aaPredicted RBP11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 MTX1Q13505 466 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 PRIMPOLQ96LW4 560 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 RBM8AQ9Y5S9 174 aaKnown RBP11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 CYP46A1Q9Y6A2 500 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 HOXB7P09629 217 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 NAA30Q147X3 362 aaPredicted RBP11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 AKAP4Q5JQC9 854 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 VPS53Q5VIR6 699 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 SUCLG2Q96I99 432 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 ITGB4P16144 1822 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 NMIQ13287 307 aaPredicted RBP11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 ESCO1Q5FWF5 840 aa11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 C16orf45Q96MC5 204 aaPredicted RBP11.17□□□□□ -0.62
HLA-DOA-201ENST00000229829 CCDC171Q6TFL3 1326 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 RNMTO43148 476 aaKnown RBP11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 CREB3L3Q68CJ9 461 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 RUFY2Q8WXA3 655 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 BOLA2Q9H3K6 86 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 BICC1Q9H694 974 aaKnown RBP11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 KDM3BQ7LBC6 1761 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 PSME1Q06323 249 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 FAM184AQ8NB25 1140 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 EDC3Q96F86 508 aaKnown RBP11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 FUCA2Q9BTY2 467 aa11.16□□□□□ -0.62
HLA-DOA-201ENST00000229829 A0A0D9SFI3 127 aa11.15□□□□□ -0.62
HLA-DOA-201ENST00000229829 UVSSAQ2YD98 709 aa11.15□□□□□ -0.62
HLA-DOA-201ENST00000229829 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
HLA-DOA-201ENST00000229829 EVI5LQ96CN4 794 aa11.15□□□□□ -0.62
HLA-DOA-201ENST00000229829 TMX1Q9H3N1 280 aa11.15□□□□□ -0.62
HLA-DOA-201ENST00000229829 KDM4AO75164 1064 aa11.15□□□□□ -0.63
HLA-DOA-201ENST00000229829 CHGBP05060 677 aa11.15□□□□□ -0.63
HLA-DOA-201ENST00000229829 PLEKHO1Q53GL0 409 aaPredicted RBP11.15□□□□□ -0.63
HLA-DOA-201ENST00000229829 LMOD2Q6P5Q4 547 aa11.15□□□□□ -0.63
HLA-DOA-201ENST00000229829 CDC37L1Q7L3B6 337 aa11.15□□□□□ -0.63
HLA-DOA-201ENST00000229829 CAMK4Q16566 473 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 LARP1BQ659C4 914 aaKnown RBP11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 MAP4K1Q92918 833 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 KCNB2Q92953 911 aa11.14□□□□□ -0.63
HLA-DOA-201ENST00000229829 NDUFB9Q9Y6M9 179 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms