RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 BICD2Q8TD16 824 aa21.93■■□□□ 1.1
CACTIN-201ENST00000221899 SCAND2PQ9GZW5 306 aaPredicted RBP21.93■■□□□ 1.1
CACTIN-201ENST00000221899 BCL2L12Q9HB09 334 aa21.93■■□□□ 1.1
CACTIN-201ENST00000221899 RIOK3O14730 519 aaKnown RBP21.93■■□□□ 1.1
CACTIN-201ENST00000221899 NR1I2O75469 434 aa21.93■■□□□ 1.1
CACTIN-201ENST00000221899 CCDC129Q6ZRS4 1044 aa21.93■■□□□ 1.1
CACTIN-201ENST00000221899 KCNH5Q8NCM2 988 aa21.93■■□□□ 1.1
CACTIN-201ENST00000221899 NRBP1Q9UHY1 535 aa21.93■■□□□ 1.1
CACTIN-201ENST00000221899 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.92■■□□□ 1.1
CACTIN-201ENST00000221899 LRMPQ12912 555 aa21.92■■□□□ 1.1
CACTIN-201ENST00000221899 CCDC186Q7Z3E2 898 aa21.92■■□□□ 1.1
CACTIN-201ENST00000221899 FOSBP53539 338 aa21.92■■□□□ 1.1
CACTIN-201ENST00000221899 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
CACTIN-201ENST00000221899 TAF5LO75529 589 aa21.91■■□□□ 1.1
CACTIN-201ENST00000221899 TPM3P06753 285 aa21.91■■□□□ 1.1
CACTIN-201ENST00000221899 HSP90B1P14625 803 aaKnown RBP21.91■■□□□ 1.1
CACTIN-201ENST00000221899 PIP4K2AP48426 406 aaPredicted RBP21.91■■□□□ 1.1
CACTIN-201ENST00000221899 PDIA6Q15084 440 aa21.91■■□□□ 1.1
CACTIN-201ENST00000221899 ANKRD24Q8TF21 1146 aa21.91■■□□□ 1.1
CACTIN-201ENST00000221899 DDX21Q9NR30 783 aaKnown RBP eCLIP21.91■■□□□ 1.1
CACTIN-201ENST00000221899 SNRKQ9NRH2 765 aa21.91■■□□□ 1.1
CACTIN-201ENST00000221899 CEBPZQ03701 1054 aaKnown RBP21.91■■□□□ 1.1
CACTIN-201ENST00000221899 CHAF1AQ13111 956 aaPredicted RBP21.91■■□□□ 1.1
CACTIN-201ENST00000221899 PGBD1Q96JS3 809 aa21.91■■□□□ 1.1
CACTIN-201ENST00000221899 LRRC2Q9BYS8 371 aa21.91■■□□□ 1.1
CACTIN-201ENST00000221899 TRIM5Q9C035 493 aa21.91■■□□□ 1.1
CACTIN-201ENST00000221899 UTYO14607 1347 aa21.9■■□□□ 1.1
CACTIN-201ENST00000221899 NPHP3Q7Z494 1330 aa21.9■■□□□ 1.1
CACTIN-201ENST00000221899 BRF1Q92994 677 aa21.9■■□□□ 1.1
CACTIN-201ENST00000221899 SEC62Q99442 399 aaKnown RBP21.9■■□□□ 1.1
CACTIN-201ENST00000221899 MYD88Q99836 296 aa21.9■■□□□ 1.1
CACTIN-201ENST00000221899 COL15A1P39059 1388 aa21.9■■□□□ 1.1
CACTIN-201ENST00000221899 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
CACTIN-201ENST00000221899 CHD2O14647 1828 aaKnown RBP21.9■■□□□ 1.1
CACTIN-201ENST00000221899 DNAJC25Q9H1X3 360 aa21.9■■□□□ 1.1
CACTIN-201ENST00000221899 GCP02774 474 aa21.89■■□□□ 1.1
CACTIN-201ENST00000221899 DNAJC2Q99543 621 aaKnown RBP21.89■■□□□ 1.1
CACTIN-201ENST00000221899 CLSTN2Q9H4D0 955 aa21.89■■□□□ 1.09
CACTIN-201ENST00000221899 NEURL1BA8MQ27 555 aa21.88■■□□□ 1.09
CACTIN-201ENST00000221899 PPP4R3BQ5MIZ7 849 aa21.88■■□□□ 1.09
CACTIN-201ENST00000221899 XAGE3Q8WTP9 111 aa21.88■■□□□ 1.09
CACTIN-201ENST00000221899 DDX19AQ9NUU7 478 aaKnown RBP21.88■■□□□ 1.09
CACTIN-201ENST00000221899 Q6ZUG5 572 aa21.88■■□□□ 1.09
CACTIN-201ENST00000221899 KLHL34Q8N239 644 aa21.88■■□□□ 1.09
CACTIN-201ENST00000221899 HMG20BQ9P0W2 317 aa21.88■■□□□ 1.09
CACTIN-201ENST00000221899 DBNLQ9UJU6 430 aaKnown RBP21.88■■□□□ 1.09
CACTIN-201ENST00000221899 CBX1P83916 185 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 NEXNQ0ZGT2 675 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 GTF3C6Q969F1 213 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 NEK1Q96PY6 1258 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 AXIN2Q9Y2T1 843 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 H3BQV1 296 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 TFCP2Q12800 502 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 IFFO2Q5TF58 517 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 COPS6Q7L5N1 327 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 ZNF165P49910 485 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 GCKRQ14397 625 aa21.87■■□□□ 1.09
CACTIN-201ENST00000221899 C16orf45Q96MC5 204 aaPredicted RBP21.87■■□□□ 1.09
CACTIN-201ENST00000221899 PPFIA3O75145 1194 aa21.86■■□□□ 1.09
CACTIN-201ENST00000221899 PDIA4P13667 645 aaKnown RBP21.86■■□□□ 1.09
CACTIN-201ENST00000221899 ZNF75DP51815 510 aa21.86■■□□□ 1.09
CACTIN-201ENST00000221899 ARHGEF25Q86VW2 580 aa21.86■■□□□ 1.09
CACTIN-201ENST00000221899 PRDM4Q9UKN5 801 aa21.86■■□□□ 1.09
CACTIN-201ENST00000221899 SMAP1Q8IYB5 467 aaPredicted RBP21.86■■□□□ 1.09
CACTIN-201ENST00000221899 ALDH8A1Q9H2A2 487 aaPredicted RBP21.86■■□□□ 1.09
CACTIN-201ENST00000221899 NCAPD2Q15021 1401 aa21.85■■□□□ 1.09
CACTIN-201ENST00000221899 RESTQ13127 1097 aa21.85■■□□□ 1.09
CACTIN-201ENST00000221899 ORAI2Q96SN7 254 aa21.85■■□□□ 1.09
CACTIN-201ENST00000221899 ADGRL3Q9HAR2 1447 aa21.85■■□□□ 1.09
CACTIN-201ENST00000221899 FGD1P98174 961 aa21.85■■□□□ 1.09
CACTIN-201ENST00000221899 ATP2B3Q16720 1220 aa21.85■■□□□ 1.09
CACTIN-201ENST00000221899 FTOQ9C0B1 505 aaKnown RBP eCLIP21.85■■□□□ 1.09
CACTIN-201ENST00000221899 TSGA10IPQ3SY00 556 aa21.84■■□□□ 1.09
CACTIN-201ENST00000221899 TNNI3KQ59H18 835 aa21.84■■□□□ 1.09
CACTIN-201ENST00000221899 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
CACTIN-201ENST00000221899 FPGT-TNNI3KV9GXZ4 949 aa21.84■■□□□ 1.09
CACTIN-201ENST00000221899 CYP21A2P08686 494 aa21.84■■□□□ 1.09
CACTIN-201ENST00000221899 SLFNL1Q499Z3 407 aa21.84■■□□□ 1.09
CACTIN-201ENST00000221899 JCADQ9P266 1359 aa21.83■■□□□ 1.09
CACTIN-201ENST00000221899 USPL1Q5W0Q7 1092 aa21.83■■□□□ 1.09
CACTIN-201ENST00000221899 ZNF790Q6PG37 636 aa21.83■■□□□ 1.09
CACTIN-201ENST00000221899 RBM43Q6ZSC3 357 aaKnown RBP21.83■■□□□ 1.09
CACTIN-201ENST00000221899 PLA2G4DQ86XP0 818 aa21.83■■□□□ 1.09
CACTIN-201ENST00000221899 DBNDD2Q9BQY9 259 aa21.83■■□□□ 1.09
CACTIN-201ENST00000221899 ZNF609O15014 1411 aa21.83■■□□□ 1.09
CACTIN-201ENST00000221899 KRT32Q14532 448 aa21.83■■□□□ 1.08
CACTIN-201ENST00000221899 ZSCAN25Q6NSZ9 544 aa21.83■■□□□ 1.08
CACTIN-201ENST00000221899 UBE3BQ7Z3V4 1068 aa21.83■■□□□ 1.08
CACTIN-201ENST00000221899 A0A087WWV3 80 aa21.82■■□□□ 1.08
CACTIN-201ENST00000221899 SCRN1Q12765 414 aa21.82■■□□□ 1.08
CACTIN-201ENST00000221899 PDCL2Q8N4E4 241 aa21.82■■□□□ 1.08
CACTIN-201ENST00000221899 TDRD7Q8NHU6 1098 aaKnown RBP21.82■■□□□ 1.08
CACTIN-201ENST00000221899 CLIP2Q9UDT6 1046 aa21.82■■□□□ 1.08
CACTIN-201ENST00000221899 SPDYE4A6NLX3 237 aa21.82■■□□□ 1.08
CACTIN-201ENST00000221899 ATP5JP18859 108 aa21.82■■□□□ 1.08
CACTIN-201ENST00000221899 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
CACTIN-201ENST00000221899 METTL22Q9BUU2 404 aaPredicted RBP21.82■■□□□ 1.08
CACTIN-201ENST00000221899 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
CACTIN-201ENST00000221899 PTCD1O75127 700 aaKnown RBP21.81■■□□□ 1.08
CACTIN-201ENST00000221899 PTPN12Q05209 780 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms